Gcaud9036.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9036.t1
Unique NameGcaud9036.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length718
Homology
BLAST of Gcaud9036.t1 vs. uniprot
Match: A0A2V3J548_9FLOR (Armadillo repeat-containing protein LFR n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J548_9FLOR)

HSP 1 Score: 1139 bits (2945), Expect = 0.000e+0
Identity = 585/649 (90.14%), Postives = 619/649 (95.38%), Query Frame = 0
Query:   73 QADEPSSNT--ANNSQQP--PQIPVASNLSSVPDVLTDEAMARNQQAATEIGVKLQAKMSIGQSISGNRRTDFITDHYRFMNEIGRPFKLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSRRAFNPFRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPSSRPRRHAAVAASTAVAAAVSDDPYSYPVFPRRSRLTGLDEHSLTVHDEQLLEDQVVNESAPHAIYVPNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDTGPGVGVSHRRMREDHLRSSTLQQYSNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYLNASPGSAGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELTHD 717
            + D+ +SN    +  QQP  P IP+A+N++ +PDVLTDEA+ RN+QAATEIG+ LQAK S+GQ ++G+RRTDFITDHYRFMNEIGRPFKLRRIGGAELDLYGLYKAVLERGGLQ+VIC RAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPH+AAPL+AVDRSRRAFNPFRHQIALPPPXXXXXXXXX   APAAVHPLQKPS+RPRRHAAVAAS+AVAAAVSDDPYSYP+FPRRSRLTGLDEHSLT HDEQLLED V NE+APHAIY+PNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHMED+VRARPFGVEAGMEEFD  APRDVPLPAMDVQ+AGYFDTGPGVGVSHRRMRED+LRSSTLQQY+NLFN+ADPIA+DREQCAVVASNVLRNMSFFDRNAIFLANS SILNISAVMIQT QVP NLREALMDMWINVSPYLNASPG  GSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYE+R+VELA+NPSPAA+TVASILFELTHD
Sbjct:   82 EKDQTNSNQDQVSEEQQPQLPLIPLAANIADIPDVLTDEALERNRQAATEIGINLQAKSSVGQPLTGDRRTDFITDHYRFMNEIGRPFKLRRIGGAELDLYGLYKAVLERGGLQSVICMRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHEAAPLFAVDRSRRAFNPFRHQIALPPPXXXXXXXXXIPTAPAAVHPLQKPSARPRRHAAVAASSAVAAAVSDDPYSYPIFPRRSRLTGLDEHSLTAHDEQLLEDHVANENAPHAIYIPNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHMEDVVRARPFGVEAGMEEFDHRAPRDVPLPAMDVQSAGYFDTGPGVGVSHRRMREDNLRSSTLQQYNNLFNLADPIAIDREQCAVVASNVLRNMSFFDRNAIFLANSTSILNISAVMIQTTQVPTNLREALMDMWINVSPYLNASPGYGGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYEARLVELAMNPSPAANTVASILFELTHD 730          
BLAST of Gcaud9036.t1 vs. uniprot
Match: R7Q3S0_CHOCR (ARID domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3S0_CHOCR)

HSP 1 Score: 689 bits (1779), Expect = 9.390e-242
Identity = 352/529 (66.54%), Postives = 425/529 (80.34%), Query Frame = 0
Query:  192 MVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSRRAFNPFRHQIALPPPXXXXXXXXXXXXAPAAVHP---LQKPSSRPRRHAAVAASTAVAAAVSDDPYSYPVFPRRSRLTGLDEHSLTVHDEQLLEDQVVNESAPHAIYVPNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDTGPGVGVSHRRMREDHLRSSTLQQYSNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYLNASPGSAGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELTHD 717
            MVA+AL LPK+CTSAAFILR+EYEKLLY YEQKHVW+R+P   A L+  DR +R        IALP                  + P   L K SSRPRR AA+AA+ AVA+AVSDDPY +PVFP+RSRLTGLDE SL+ ++EQ+++D++VN++APH +YVP QPGE+ERVV+ALWSP+HDDVAWALGTLNALSFD RN+FVAQEFPG+LDAL+EVLNR++ED++R R +GV AG+EE D  APRD+ + A+D++ AG+  TGPG+GVS   + E+ LRSS+LQQY NLFN+ADPIA+DR+QCA VA NVLRNMSF  RNA +LA S  IL ISAVMI  + V ANLRE L+DMW+NVSP + A+PGS G  VL  C+KLLDPF +GAE +RF N GEVLARLAASPERNEAAIVS+F ++LPR+VDML GR+RRYV+A LAALCNFSAFDWPARD IAR PR L+RLVGMLSD E APRAALTLLNLAEAPNNRSV++ +E+ +VE A+ PSPAADTVASILF+L+ D
Sbjct:    1 MVAKALNLPKSCTSAAFILRVEYEKLLYAYEQKHVWDRDPQHVAQLFPADRVKR--------IALPIMRAGDYDRRSLSSHTPGMSPMYALPKTSSRPRRQAALAATNAVASAVSDDPYGFPVFPKRSRLTGLDEASLSPYEEQIIDDEIVNDNAPHGVYVPGQPGEKERVVSALWSPMHDDVAWALGTLNALSFDARNVFVAQEFPGILDALNEVLNRYLEDVMRKRSYGVAAGIEELDLNAPRDIEMAAVDIRHAGHDLTGPGIGVSRNPLHEEFLRSSSLQQYPNLFNLADPIAIDRQQCATVAVNVLRNMSFCPRNAAYLALSPQILGISAVMISNVGVGANLREGLVDMWMNVSPVMTATPGSPGHTVLMACVKLLDPFKEGAEVTRFTNIGEVLARLAASPERNEAAIVSSFPELLPRVVDMLSGRNRRYVSAGLAALCNFSAFDWPARDAIARVPRCLDRLVGMLSDTEFAPRAALTLLNLAEAPNNRSVMITHEAALVEFAMTPSPAADTVASILFDLSDD 521          
BLAST of Gcaud9036.t1 vs. uniprot
Match: A0A7S3A7B0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7B0_9RHOD)

HSP 1 Score: 384 bits (986), Expect = 2.050e-120
Identity = 246/649 (37.90%), Postives = 362/649 (55.78%), Query Frame = 0
Query:  106 DEAMARNQQAATEIGVK-LQAKMSIGQSISGNRRTDFITDHYRFMNEIGR-PFKLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSR--RAFNPFRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPS-----SRPRRHAAVAASTAVAAAVSDDPYSYPVFPRRSRLTG-------LDEHSLTVHDEQLLEDQVVN------------------ESAPHAIYVPNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDTGPGVGVSHRRMREDHLRSSTLQQYSN-LFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYLNASPGSAGSAVLATCIKLLDPFNDGAEQ--SRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELTHD 717
            ++A+ + +    EIG + +  +M  G   SG+ + DF+ DH  FM EIG   FK+  +GG+ L++Y L+  V+++GGL  VI TRAFK+V + L LP++CTSAA++LR  YEK+LY YEQ  V+ R+  Q   L  +++ +   A N  + + +                 P+A    ++PS      RP+R AA  A TAVAA+VS D +     P   R  G       L   +            V N                  E  P A++  + P +RE++V ++   + + VAW LG  NALS D R   + ++FPG++DAL   L R+  D  R R  G+  G++     A     L  M   +A   D+           RED     TL QY + LFN  DP++++ E+ A++ASNVLRN+SF ++N    A S+++  +   ++ + +V   +++ L D+WIN + ++N S G     VL T +  LDPF  G E   SRF    ++LARLA + +RNE AI + FD ++PRL+D+LGG+ RR   A+L+A+CN S FDWPAR ++ARTPR ++RLV +L D EL  RAALTL NLAEAP+NRSVL  YE  +VELA+ P PAA+T+AS+L+E T D
Sbjct:   32 EDAIQKYKAVVPEIGRRFISEQMKNGSMGSGSPKDDFLADHKHFMTEIGELNFKVPTLGGSPLNIYQLFVEVMDQGGLNNVIETRAFKIVTRKLVLPRSCTSAAYMLRQSYEKILYQYEQHFVFGRDA-QRTKLLLMEKKKLIEAENQLKQEASR---ANEQQVDPGLGAQPSASEAAKEPSVTSGRERPKRKAAETAVTAVAASVSIDTFGVNPSPNMPRRRGRPPSAEKLAARAAXXXXXXXXXXAVPNGGYAHGGAEGRNLYCANIEPPPQAVFNYDNPQDREKLVLSIAGDVREQVAWGLGAANALSCDNRRNLLVRDFPGLVDALLLTLQRYWRDTERLRKQGLHPGID-----ARIKSGLRIMAAASANGRDSSK----EPESWRED----PTLLQYDHDLFNFRDPVSIETEERALLASNVLRNLSFIEKNGALFAESVNLHEMVGRLVLSPKVALEIKDNLTDLWINSASHMNVSEGYPAEKVLVTAVSCLDPFLPGQEYFVSRFAKAADILARLATNIDRNEGAITACFDVLIPRLIDVLGGQQRRVAAAALSAVCNVSMFDWPARGKLARTPRGIDRLVALLQDEELGARAALTLQNLAEAPSNRSVLSRYERELVELAVVPGPAAETIASVLYEFTAD 663          
BLAST of Gcaud9036.t1 vs. uniprot
Match: UPI001E1DFADF (armadillo repeat-containing protein LFR-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFADF)

HSP 1 Score: 335 bits (860), Expect = 5.370e-107
Identity = 169/264 (64.02%), Postives = 209/264 (79.17%), Query Frame = 0
Query:  452 PGVGVSHRRMREDHLRSSTLQQYSNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYLNASPGSAGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELT 715
            PG G+     RE  LR+ +LQ+Y +LFNIAD +A+DREQC VVA NV+RNMSF D NAI LA++ S+L ++A ++   QVP  +R  +MDMW+N++PYLN S  +AG  VL TCI+LLDPF +GA+ SRF N GE+LARLAASPERNE A+V  F ++LPRL+DMLGGR RRYVNA LAALCN SAFDWPAR RIAR PRA+ RL+ MLSD ELAPRAALTLLNLAEAP+NR V++ YE ++V  A+  SPAADTVAS+LF+L+
Sbjct:    6 PGSGLLDCHRRETTLRTPSLQRYDSLFNIADSMALDREQCTVVAVNVIRNMSFSDPNAIHLASAKSLLELTAEVLMMFQVPLTIRVGIMDMWVNIAPYLNVSSDAAGGIVLKTCIQLLDPFLEGADHSRFTNAGEILARLAASPERNENAMVEHFPELLPRLIDMLGGRDRRYVNAGLAALCNCSAFDWPARGRIARVPRAISRLITMLSDPELAPRAALTLLNLAEAPSNRCVMLVYEKQLVSHAIQQSPAADTVASVLFDLS 269          
BLAST of Gcaud9036.t1 vs. uniprot
Match: M2XJD9_GALSU (ARID/BRIGHT DNA binding domain containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XJD9_GALSU)

HSP 1 Score: 278 bits (710), Expect = 1.640e-80
Identity = 195/630 (30.95%), Postives = 327/630 (51.90%), Query Frame = 0
Query:  101 PDVLTDEAMARNQQAATEIGVKLQAKMSIGQSISGNRRTDFITDHYRFMNEIGRP-FKLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVD-RSRRAFNPFRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPSSRPRRHAAVAASTAVAAAVSDDP-YSYPVFPRRSRLTGLDEHSLTVHDEQLLEDQVVNESAPHAIYVPNQP----------GERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDTGPGVGVSHRRMREDHLRSSTLQQYSNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYLNASPGSAGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELTHD 717
            P+V  +E +    +    +G    ++       S +RR +F+ D   +MNEIGR  FK+  +GG  LD++ LY+ V+ RGG+Q VI  R FK +++ L LPKTCT+AAF+LR  YEK+LY YEQKHV+ R   +  P+  +  R  R  +  R   A   P                   +++P           +    A +VS +  ++Y     R+  + +     T +D       +V E     ++V ++P           ER ++V AL S I D+++WAL T+N LSFD +  F+ +++P +L++L  +L  ++ED+   R FG+    E+      ++  L A+D+  +          ++H     +++ + +LQ Y +LF   DPI + RE  A   +N LRN+SF +RN    A  +S+L     +I + +  + +   L D   N++  +  +  +    +L + I +L  + D  + +R +   E++ARL  +P+ NE  ++  FD++L  LV  L   ++     ++ A+CN SAFDW AR  IA+TP  +  L   LSD  +AP +A+T+ NLAEAP+NR++L+ YES+ V +A++ S A++ VA  L EL+ D
Sbjct:   13 PEVTREERIEVGNRVVGTVGTYFISRALRDSVPSRDRRRNFLEDLSAYMNEIGRGNFKIPTLGGFTLDVFILYQEVVRRGGVQHVIDNREFKEISKILRLPKTCTAAAFVLRESYEKILYFYEQKHVFGRSAEEVPPVVQLGARLERVSSTPRSLNATDTPAYEGSRENSFTNLS-----MEQPKG-------FGSELGGAPSVSPNRRHTYVDSNNRNATSSMGWDRTTSYDSLQTSRNLVQEE----VFVTSRPLSGSFRTDIGSERNKLVLALQSGIEDEISWALVTINVLSFDPKLDFLIRDYPMLLESLEIILKEYLEDLNGCRTFGLHPDDEDARSSGAKNKMLSAVDINTSNV--------IAH-----NNVCNPSLQNYGDLFCTRDPIFLKREWNAKCVANALRNLSFIERNHPSFAKHVSLLRTCISIIVSSEAASQVVYDLSDTLKNIAVEVKLNQDTL--FLLDSAIAILYEWEDCTDDTRILKATELIARLCFNPD-NELELLKRFDEILSLLVGFLSSENKDIRLVAVGAICNASAFDWNARVAIAKTPSVVYYLTQCLSDPYIAPLSAITIANLAEAPSNRAILLRYESKFVHVAMSNSAASELVACALKELSDD 610          
BLAST of Gcaud9036.t1 vs. uniprot
Match: UPI001E1D2F20 (uncharacterized protein LOC123543557 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2F20)

HSP 1 Score: 215 bits (547), Expect = 3.310e-60
Identity = 134/304 (44.08%), Postives = 176/304 (57.89%), Query Frame = 0
Query:  106 DEAMARNQQAATEIGVKLQAKMSIGQSISGNRRTDFITDHYRFMNEIGRPFKLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSRRAFNPFRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPSSRPRRHAAVAASTAVAAAVSDDPYSYPVFPRRSRLTGLDEHSLTVHDEQLLEDQVVNESAPHAIYVPNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDALHEVLNRHM 409
            D  +AR + AA + G++  +        +G+RR DF+ DH  FM E  +  ++R IGGA LD+YGLY  VLERGG+QAV   RAFKMVA+AL LPK+CTSAA +LR  Y + LY+YEQKHV++R             S   +NP   Q                  A ++      PSSRPRR AA+AAS AVA AVSDDPY      RR R  G+DE SLT     ++E++V+        +  +   +RER+VAAL  PI  +VAWALGTLN LS+D R  F A+ +PGVL AL  ++  H+
Sbjct:    4 DAILARYRAAAGDAGLRFVSAEMRSVQPTGDRRQDFLNDHEYFMRENNQDLRVRTIGGARLDIYGLYVNVLERGGVQAVTTNRAFKMVARALNLPKSCTSAATVLRTSYMEQLYLYEQKHVFDRNA----------SSDEVYNPHLRQGYA---DLGSQLDARVGVASSSGATGTTPSSRPRRQAALAASNAVAQAVSDDPYDANRNGRRGR-GGVDEASLTARQLAIVEEEVMQTRNASLPFNSSILADRERLVAALKCPIQSEVAWALGTLNVLSYDTRTGFHARTYPGVLHALQGIIALHL 293          
BLAST of Gcaud9036.t1 vs. uniprot
Match: M1V5R5_CYAM1 (Similar to DNA binding protein, dead ringer n=2 Tax=cellular organisms TaxID=131567 RepID=M1V5R5_CYAM1)

HSP 1 Score: 200 bits (509), Expect = 1.050e-50
Identity = 213/770 (27.66%), Postives = 325/770 (42.21%), Query Frame = 0
Query:  119 IGVKLQAKMSIGQ-SISGNRRTDFITDHYRFMNEIGRPF-KLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSRRAFNP----------------------------FRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPSSRPRRHAAVAASTAVAAAVSDD----PYSYPVFPRRSRL--------------TGLDEHSLTVHDEQLLEDQVVNESAPHAIYVPNQPGERERVVAALWSPIHDDVAWALGTLNAL----------SFDLRNIFVAQE-----FPGVLDALHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDTGPGVGVSHRRMREDHLRSSTLQQY-SNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSP---------YLNAS--------------------------------------------------------PGSAGSA------VLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEAAIVSTFDDVLPRLVDMLGGRSRRYVN------ASLAALCNFSAFDWPARDRIARTPRALERLV------------------GMLSDAELAPR------------AALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELTHD 717
            +  ++Q K + G+   +     ++  D + ++ E   P  KL  +GGA LDLY L+  +++RGGLQ  I  R FK VA+ L LP TCT+AAF LR  YE+L Y+YEQK ++NREPH+A P+    +S  +F P                             R  +                   AA  PL  P +  +    V+      A +       P+S    P R R+              + L  +  +V  ++    +      P+  +  N   ERE++V +L S + ++V WAL TLNAL          S   R+     E     +PG+LDAL+++L+ ++ED+ R R + +    E  +    R   L   D+ A+      PG G + R +       S+LQ Y + L N  D IA +R Q +++ +N LRNMSF   N I LA   ++ + +  +++         + L+DMW+N++          + NA+                                                         G A SA       L T I  LD  +  A   R     E++A+ A   E NE  +++ F  +LPRLVDM+   +  ++       A+L AL + SAF+W AR+RIARTPR +  LV                  G+ S +E +PR            AAL LLNLAE P+NR +L+ YE  +V  A+    A   +AS+L EL  D
Sbjct:  100 VSQEMQRKQASGKLDPAATPEDNWYADLWAYLAENNLPRGKLPTLGGAPLDLYKLFVLIIQRGGLQKTIDARDFKNVAKELALPPTCTAAAFALRQAYERLAYVYEQKFLFNREPHEAPPIRQAVKSSMSFVPRPGGSDGATPEDSVSRIAFRGFEGEQATSRSLVRFGGDGLVSGSHGNATSGSAAGAPLTAPPTGQQHTVRVSKQVLRDALMGAGGLLLPFSGVSVPYRERIKQEVAATESPKRRRSALRGNGRSVGSQRGHWKERAPPWLPY--FAENLNSEREKLVLSLQSGVREEVRWALTTLNALCSGAPAGTSVSIGGRSTSGRLELRCALYPGLLDALNDLLDAYLEDLERRRQWSLSMPQELREC---RGAHLA--DLSASALETLEPGAGNNERALDTPE---SSLQGYRAGLMNCRDTIAKERAQYSLLVTNALRNMSFTTGNEIALATHPALRSTTLRLLRHPDTQPACVDDLLDMWLNIASSVTLVSRTDWANAAGSGVADMNTLRTNAEHAASVIVNGVDETSRPAAQVDAPAPSSGWRESNTVRRGLAVTGDAHSAHSSRVDALDTIIDWLDATHPNASVQRLCKAAEIVAQFATRLE-NETIMITRFPVLLPRLVDMVAPGTGTHLASVQLSMAALDALASLSAFEWQARERIARTPRLVPTLVRVVAAAVAQQEPELLHRAGVPSPSETSPRVTATIGASLSARAALVLLNLAENPHNRRLLLPYELVLVYGAMTDKVAGTALASVLHELVAD 858          
BLAST of Gcaud9036.t1 vs. uniprot
Match: A0A7S3ELY9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELY9_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 4.060e-35
Identity = 106/328 (32.32%), Postives = 164/328 (50.00%), Query Frame = 0
Query:  106 DEAMARNQQAATEIGVK-LQAKMSIGQSISGNRRTDFITDHYRFMNEIGR-PFKLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSR--RAFNPFRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPS-----SRPRRHAAVAASTAVAAAVSDDPYSYPVFPRRSRLTG-------LDEHSLTVHDEQLLEDQVVN------------------ESAPHAIYVPNQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLD 399
            ++A+ + +    EIG + +  +M  G   SG+ + DF+ DH  FM EIG   FK+  +GG+ L++Y L+  V+++GGL  VI TRAFK+V + L LP++CTSAA++LR  YEK+LY YEQ  V+ R+  Q   L  +++ +   A N  + + +                 P+A    ++PS      RP+R AA  A TAVAA+VS D +     P   R  G       L   +            V N                  E  P A++  + P +RE++V ++   + + VAW LG  NALS D R   + ++FPG++D
Sbjct:   32 EDAIQKYKAVVPEIGRRFISEQMKNGSMGSGSPKDDFLADHKHFMTEIGELNFKVPTLGGSPLNIYQLFVEVMDQGGLNNVIETRAFKIVTRKLVLPRSCTSAAYMLRQSYEKILYQYEQHFVFGRDA-QRTKLLLMEKKKLIEAENQLKQEASR---ANEQQVDPGLGAQPSASEAAKEPSVTSGRERPKRKAAETAVTAVAASVSIDTFGVNPSPNMPRRRGRPPSAEKLAARAAXXXXXXXXXXAVPNGGYAHGGAEGRNLYCANIEPPPQAVFNYDNPQDREKLVLSIAGDVREQVAWGLGAANALSCDNRRNLLVRDFPGLVD 355          
BLAST of Gcaud9036.t1 vs. uniprot
Match: A0A7J7IJ54_9RHOD (AT rich interactive domain 5A (MRF1-like) n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJ54_9RHOD)

HSP 1 Score: 132 bits (331), Expect = 6.340e-29
Identity = 130/460 (28.26%), Postives = 194/460 (42.17%), Query Frame = 0
Query:  119 IGVKLQAKMSIGQ-SISGNRRTDFITDHYRFMNEIGRPF-KLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELPKTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSRRAFNP-------------------FRHQIALPPPXXXXXXXXXXXXAPAAVHPLQKPSSRPRRHAAVAASTA-------VAAAVSDD----------PYSYPVFPRRSR----LTGLDEHSLTVHDEQLLEDQVVNE-------SAPHAIYVPNQPG-ERERVVAALWSPIHDDVAWALGTLNAL---------------SFDLRNIFVAQEFPGVLDALHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDTGPGVGVSHRRMREDHLRSSTLQQYSNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLA 513
            +  ++Q K + G+   +     ++  D + F+ E   P  KL  +GG+ LDLY L+  +++RGGLQ+ I +R FK VA+ L LP TCT+AAF LR  YE+  Y+YEQK +++R+PH+  P+    ++   + P                   FR                     P  +             AA+A+ T        V+  V  D          P+S    P R R    L+  D         + L      E       S P   Y       ERER+V +L S + ++V WAL TLNAL               S   R       +PG+LDAL+++L  ++ED+ R R +G+ A  E       R   LPA++++         G         E  L+ S       LFN  DPI+ +R + A + +N LRN+SF   N I LA
Sbjct:   27 VSAEMQRKQAAGELDPNATAEENWYADLWAFLAEHNLPRGKLPTLGGSPLDLYRLFVLIIQRGGLQSTIDSRDFKNVAKELALPPTCTAAAFALRQAYERFAYVYEQKFLFHRDPHEVPPIRQAVKTSLTYVPRPGGGSDGATPDDSASRLIFRGPEGEQATSSGIGRFAGDASVPLGLAGTSTGLGGASNAAAMASPTPTQQHMVRVSKQVLRDALLGAGGLLLPFSGASVPYRERVKQELSSADSSKRRRSAARALSRSPRRERSRWKERSPPWLPYFAEAHCYERERLVLSLQSGLREEVRWALTTLNALCSGAPAGTSVTIGGRSTSGRLEVRCALYPGLLDALNDLLKPYLEDLERKRQYGLSAIEEMRRSCGARLALLPALELEPLAMNGNVEGAA-------EQQLQPSLQSYRPGLFNTRDPISRERAEYARLVTNALRNLSFTTGNEIALA 479          
BLAST of Gcaud9036.t1 vs. uniprot
Match: A0A7S1EQX0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQX0_9RHOD)

HSP 1 Score: 127 bits (319), Expect = 8.800e-29
Identity = 89/256 (34.77%), Postives = 140/256 (54.69%), Query Frame = 0
Query:  467 RSSTLQQYSNLFNIADPIAVDREQCAVVASNVLRNMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYLNASPGSAGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERN----EAAIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPA-RDRIARTPRALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNPSPAADTVASILFELTHD 717
            RSS L  +   F++     + RE   +  SN+LRN+S   RNA  +   + +   SA +IQ   +   +R+ L+DM++N+S  L+    S    +L   + LLDP +    +       +++A L+AS ++N    E AI+S  D +LP LVD++   +   V A+L A+CN SAF+  + R ++AR    + RL+ ML     + RAALTLLNLAE P NR +L+ YE   +  A   +PA++ +A +L EL  D
Sbjct:   51 RSSALY-FREYFDVKSVDEMMREDWVLSVSNILRNVSMISRNAKAMNECVDLFKTSADIIQHGSISKLVRQNLVDMFLNLSLSLSEDEQSI-EILLQAAMNLLDPKSVHVHRRWQAESAQLIANLSASFQQNNDASERAIISKLDAILPLLVDLMHSANEPQVEAALHAVCNISAFENESVRRKLARAVSLIPRLIAMLGIGVKSVRAALTLLNLAEIPANRFILLQYEQTFIYYAFCENPASEIIARVLKELVLD 304          
The following BLAST results are available for this feature:
BLAST of Gcaud9036.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J548_9FLOR0.000e+090.14Armadillo repeat-containing protein LFR n=1 Tax=Gr... [more]
R7Q3S0_CHOCR9.390e-24266.54ARID domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S3A7B0_9RHOD2.050e-12037.90Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI001E1DFADF5.370e-10764.02armadillo repeat-containing protein LFR-like n=1 T... [more]
M2XJD9_GALSU1.640e-8030.95ARID/BRIGHT DNA binding domain containing protein ... [more]
UPI001E1D2F203.310e-6044.08uncharacterized protein LOC123543557 n=1 Tax=Merce... [more]
M1V5R5_CYAM11.050e-5027.66Similar to DNA binding protein, dead ringer n=2 Ta... [more]
A0A7S3ELY9_9RHOD4.060e-3532.32Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IJ54_9RHOD6.340e-2928.26AT rich interactive domain 5A (MRF1-like) n=1 Tax=... [more]
A0A7S1EQX0_9RHOD8.800e-2934.77Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM01014ARID_2coord: 132..222
e-value: 1.2E-19
score: 81.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..99
NoneNo IPR availablePANTHERPTHR12656:SF5TRITHORAX GROUP PROTEIN OSAcoord: 10..289
coord: 586..716
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..717
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
IPR001606ARID DNA-binding domainSMARTSM00501bright_3coord: 136..227
e-value: 2.3E-18
score: 77.0
IPR001606ARID DNA-binding domainPFAMPF01388ARIDcoord: 138..222
e-value: 5.3E-11
score: 43.1
IPR001606ARID DNA-binding domainPROSITEPS51011ARIDcoord: 135..226
score: 21.988213
IPR036431ARID DNA-binding domain superfamilyGENE3D1.10.150.60coord: 112..244
e-value: 1.6E-23
score: 84.5
IPR036431ARID DNA-binding domain superfamilySUPERFAMILY46774ARID-likecoord: 137..229
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 458..717
e-value: 6.7E-9
score: 37.3
IPR021906SWI/SNF-like complex subunit BAF250/OsaPANTHERPTHR12656BRG-1 ASSOCIATED FACTOR 250 BAF250coord: 10..289
coord: 586..716
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 371..686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_276_length_32607_cov_4.055265contigNODE_276_length_32607_cov_4.055265:21738..23891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9036.t1Gcaud9036.t1Gracilaria caudata M_176_S67 malemRNANODE_276_length_32607_cov_4.055265 21738..23891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9036.t1 ID=Gcaud9036.t1|Name=Gcaud9036.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=718bp
MSAAVHTAPSTAAASTATSAAAAGTPADSQSPVAAVADAVADGDAAAAAA
TTSPSSAPPSSAPPSSAPAPAAQADEPSSNTANNSQQPPQIPVASNLSSV
PDVLTDEAMARNQQAATEIGVKLQAKMSIGQSISGNRRTDFITDHYRFMN
EIGRPFKLRRIGGAELDLYGLYKAVLERGGLQAVICTRAFKMVAQALELP
KTCTSAAFILRIEYEKLLYMYEQKHVWNREPHQAAPLYAVDRSRRAFNPF
RHQIALPPPPPSPPPPPPAPTAPAAVHPLQKPSSRPRRHAAVAASTAVAA
AVSDDPYSYPVFPRRSRLTGLDEHSLTVHDEQLLEDQVVNESAPHAIYVP
NQPGERERVVAALWSPIHDDVAWALGTLNALSFDLRNIFVAQEFPGVLDA
LHEVLNRHMEDIVRARPFGVEAGMEEFDPLAPRDVPLPAMDVQAAGYFDT
GPGVGVSHRRMREDHLRSSTLQQYSNLFNIADPIAVDREQCAVVASNVLR
NMSFFDRNAIFLANSMSILNISAVMIQTLQVPANLREALMDMWINVSPYL
NASPGSAGSAVLATCIKLLDPFNDGAEQSRFMNCGEVLARLAASPERNEA
AIVSTFDDVLPRLVDMLGGRSRRYVNASLAALCNFSAFDWPARDRIARTP
RALERLVGMLSDAELAPRAALTLLNLAEAPNNRSVLMYYESRMVELALNP
SPAADTVASILFELTHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001606ARID_dom
IPR036431ARID_dom_sf
IPR011989ARM-like
IPR021906BAF250/Osa
IPR016024ARM-type_fold