Gcaud3523.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3523.t1
Unique NameGcaud3523.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length358
Homology
BLAST of Gcaud3523.t1 vs. uniprot
Match: A0A2V3J694_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J694_9FLOR)

HSP 1 Score: 336 bits (862), Expect = 7.280e-111
Identity = 189/365 (51.78%), Postives = 242/365 (66.30%), Query Frame = 0
Query:    1 MEDWFQAALIAYTTRSADRFHQTRQQKANASEPVLVRSQLDA-SLKAFERVTFPALEEYLAKAAKAYDEWKLRKHVSDNERAPPQKLGSGEPVQALFASLRRERWLLSLVRRAHFVRAPLPLPVAQIVVCGIPEDIRHSAHQRYMARKSSFSQRHNIRRDRPPSPV------LGILQENEQLTLCVS-LITRDNGYLIHTSRCRLLCSEGKRVLVRVSQAMLGTPEDDFEEVRRRYLGKPDELYRRKTARKFSRWRRLQREQEKEKQAAELRAEREMKRRRGFDHRLTTREARDATFAPFLYDTNCTAYAYSSKITEAPKLRKVMITKYNDFSSSAGDEPDQWERAREAAKTNPLFHTRVMNRFS 357
            ME WF+AA+ AY  R+A  FH+ +  K +        S ++  S+  ++RV FPALE++L  AA+AY   K R   S  ++   QKLGSGEPV+ALFA +RRERWL +    AH  RA   +     V CGIP DIR  AH RY+  +SS  Q+          PV      LG   +    +  +S ++T++ GY++H SRCR   ++G+  LV ++   L    D FEEV+ RY GKPDELYRRKTARKF+RWRR +RE E+EK A EL+AE+EMKRRRG+D RLT+REARD++FAPFL++TNC AYAYS+KITEAPKLRKVMI KYND   +    PDQWERA +AAK+ PLFHTRVMNRFS
Sbjct:    1 MEKWFKAAIAAYRDRAATDFHERQSVKHDELTAATHASSIETDSITCYKRVLFPALEDFLRHAAEAYGVSKQRASSSIKKKTAAQKLGSGEPVEALFACVRRERWLTAAATAAHLTRASPTVSFVTTVFCGIPADIRDQAHARYIELRSSIRQQ-------AIEPVVHFGHALGAYTDTTNGSDILSAVVTKEEGYVVHVSRCRNNYAQGRTSLVWMNTPNLENRYDTFEEVKSRYAGKPDELYRRKTARKFARWRRKRREGEQEKLAVELKAEKEMKRRRGYDQRLTSREARDSSFAPFLFETNCQAYAYSTKITEAPKLRKVMIQKYNDSDEAKQHVPDQWERALQAAKSTPLFHTRVMNRFS 358          
BLAST of Gcaud3523.t1 vs. uniprot
Match: S0F3U5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3U5_CHOCR)

HSP 1 Score: 182 bits (463), Expect = 1.740e-51
Identity = 137/327 (41.90%), Postives = 173/327 (52.91%), Query Frame = 0
Query:   46 AFERVTFPALEEYLAKAAKAY-DEWKLRKHVSDNERAPPQKLGSGEPVQALFASLRRERWLLSLVRRAHFVRAPLPLPVAQ---IVVCGIPEDIRHSAHQRYMARKSSFSQRHNIRRDRPPSPVLGILQENEQLT-LCVSLITRDN-GYLIHTSRCR---------LLCSEGKRVLVRVSQAMLGTPEDDFEEVRRRYLGKPDELYRRKTARKFSRWRRLQREQEKEKQAAELRAEREMKRRRGFDHRLTTREARDATFAPFLYDTNCTAYAYSSKITEAPKLRKVMITKYNDFSSSAGDEPDQWERAREAAKTNPLFHTRVMNRFS 357
            A++R  FPAL  YLAKAA  + D  +               LG GE V AL    RR RW      R H +RA     V Q   ++  G+P D+R   H R++ R++   +R    R+     V G+   +E+L  +C   I  D  GY+   +R R         LL   GK V V           D FEEVR+RY G+PDELYRRKTAR+F+RW                    EMKRRRG+DH LT R A D++FAPFLY+    AYA+SSKITEAPKLRKVMI KY+  +       D WERA++ A+ NPLFHTRVMNRF+
Sbjct:    6 AYKRPLFPALTAYLAKAAGEFRDAPRAAIATPRTVTKIVLPLGHGELVVALAGERRRARWARLQAERMHEIRAF----VGQRDYVLPGGVPLDVRQGKHARWLERRAE--ERRQDAREVVERRVGGLEAGSEELRRVCGRGIRADRRGYVQFLARAREGFDCGMPGLLSMGGKGVAVG----------DTFEEVRKRYAGRPDELYRRKTARRFARWXXXXXXXXXXXXXXXXXXXSEMKRRRGYDHLLTDRRAGDSSFAPFLYELEGNAYAFSSKITEAPKLRKVMIDKYS--ARDGATVTDGWERAQQVAEQNPLFHTRVMNRFT 314          
BLAST of Gcaud3523.t1 vs. uniprot
Match: A0A7S0ZAW6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAW6_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 4.780e-13
Identity = 52/132 (39.39%), Postives = 78/132 (59.09%), Query Frame = 0
Query:  228 YLGKPDELYRRKTARKFSRWRRLQREQEKEKQAAELRAEREMKRRRGF--DHRLTTREARDATFAPFLYDTNCTAYAYSSKITEAPKLRKVMITKYNDFSSSAGDEPDQWERAREAAKTNPLFHTRVMNRFS 357
            Y G PDE+Y+RK ++KF+ +RR + + E+        AE  +++ RG   DH  T     +  F PFL++   T +AY+S IT+  K R+ MI KY +  SSA  E +    A++ A+  P+FHTRVMNRF+
Sbjct:  242 YCGLPDEVYKRKQSKKFAVYRRQKLQSERIAADRVRLAECGLRKSRGKQNDHIGTNNAYGNNGFRPFLFNNEHTTFAYTSSITQNHKHRENMIRKYVELGSSAEQEQNALIAAQQLAREKPMFHTRVMNRFT 373          
The following BLAST results are available for this feature:
BLAST of Gcaud3523.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J694_9FLOR7.280e-11151.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
S0F3U5_CHOCR1.740e-5141.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZAW6_9RHOD4.780e-1339.39Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_25_length_75543_cov_4.432116contigNODE_25_length_75543_cov_4.432116:51773..52846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3523.t1Gcaud3523.t1Gracilaria caudata M_176_S67 malemRNANODE_25_length_75543_cov_4.432116 51773..52846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3523.t1 ID=Gcaud3523.t1|Name=Gcaud3523.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=358bp
MEDWFQAALIAYTTRSADRFHQTRQQKANASEPVLVRSQLDASLKAFERV
TFPALEEYLAKAAKAYDEWKLRKHVSDNERAPPQKLGSGEPVQALFASLR
RERWLLSLVRRAHFVRAPLPLPVAQIVVCGIPEDIRHSAHQRYMARKSSF
SQRHNIRRDRPPSPVLGILQENEQLTLCVSLITRDNGYLIHTSRCRLLCS
EGKRVLVRVSQAMLGTPEDDFEEVRRRYLGKPDELYRRKTARKFSRWRRL
QREQEKEKQAAELRAEREMKRRRGFDHRLTTREARDATFAPFLYDTNCTA
YAYSSKITEAPKLRKVMITKYNDFSSSAGDEPDQWERAREAAKTNPLFHT
RVMNRFS*
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