Gcaud9462.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9462.t1
Unique NameGcaud9462.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length185
Homology
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A2V3ICL6_9FLOR (Thioredoxin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICL6_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 3.750e-82
Identity = 117/182 (64.29%), Postives = 151/182 (82.97%), Query Frame = 0
Query:    2 LGKSKESMEQSRDFIIDRDIKDKRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFPGLRLDELRQASE 183
            LGKSKES+E++RD ++ +   DKRKRY +A  + L+G AAFL QK DPNSG +LL  M+  S   SV+GTNNKP+++EFS TWC NC+ +AR VF+LE KY  ++NFLVFNG+DPKNAE++DR+SVDGIPQFSMI+RDG+VKGNLVGRIPR+VLA+DL+ALL+ +ELPFPGL  DE+R A++
Sbjct:   89 LGKSKESLEEARDNVMQQSKADKRKRYASAITATLVGVAAFLVQKLDPNSGVNLLRLMFESSAPASVVGTNNKPSMIEFSATWCENCRYTARSVFELEKKYGNEINFLVFNGEDPKNAEVVDRFSVDGIPQFSMISRDGTVKGNLVGRIPRNVLAEDLEALLKDEELPFPGLPFDEIRAAAK 270          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S2ZJY3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJY3_9RHOD)

HSP 1 Score: 131 bits (330), Expect = 5.210e-35
Identity = 62/156 (39.74%), Postives = 98/156 (62.82%), Query Frame = 0
Query:   23 DKRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFPGLRLDEL 178
            + R+R   A + V+LG A +L +K+   +  ++L  M   S +  V  +N KPT+LEF   WC +CK  A  V  LE ++ G VNF+V NG++P   E+L +Y VDG+P F+++  DG ++  L+G+IP  VL  DL+AL+ G+ELP+ G  L+++
Sbjct:   68 EMRQRIAKALLGVVLGVAFYLGEKYTMGNPITMLHGMEQLSPTYEVAISNAKPTMLEFYADWCESCKTMAPKVSKLETQFAGSVNFVVMNGENPNYRELLYKYRVDGVPHFALLGADGKLQTTLIGKIPVSVLEDDLNALVNGEELPYIGFDLEDM 223          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S0G739_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G739_9RHOD)

HSP 1 Score: 131 bits (329), Expect = 7.550e-35
Identity = 63/154 (40.91%), Postives = 95/154 (61.69%), Query Frame = 0
Query:   25 RKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFPGLRLDEL 178
            R++   A   V LG A +L +K+   +  +LL  M   S +  V  +N KPT+LEF   WC +CK  A  V  LE ++ G VNF+V NG++P   E+L +Y VDG+P F+++  DG ++  L+G+IP  VL  DL+AL+ G+ELP+ G  ++EL
Sbjct:   70 RQKLAKALFGVFLGVAFYLGEKYTFGNPITLLHGMEQLSPTYEVAVSNAKPTVLEFYADWCESCKKMAPKVSKLETEFAGSVNFVVMNGENPDYRELLQKYRVDGVPHFALLGADGKLQTTLIGKIPMSVLEDDLNALVNGEELPYIGFDIEEL 223          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S2V5P4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P4_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.290e-30
Identity = 61/171 (35.67%), Postives = 97/171 (56.73%), Query Frame = 0
Query:    2 LGKSKESMEQSRDFIIDRDIKDKRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFPG 172
            L K   S E +++  ++   K+++     A  SVL     F  Q+F P    SLL  M A S     + TN KPT+++F   WC  CK  A  +  +E ++ G+VNF+  NG DPKNA+++ ++ VDGIP  + +  +G V+   VG +P+DVL +++DAL + + LP+ G
Sbjct:    5 LEKKASSKESAQEMQVEVT-KERKNNLLIACSSVLAAVCLFATQRFFPPDSLSLLRAMEAESTPLIAVQTNGKPTVVDFYADWCGYCKTMAPSMRTVEKEFAGRVNFVTVNGADPKNADLVYKFKVDGIPHIAFMDGEGYVETAFVGLVPKDVLEEEVDALAKHKALPYEG 174          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S3XXL6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXL6_HETAK)

HSP 1 Score: 117 bits (292), Expect = 5.760e-30
Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = 0
Query:   30 AAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFPG 172
            AA  S L     F  Q+  P     LL  M   S   +V   N KPT+++F   WCSNCKA A  +  LE +Y G+VNFL  +G DP+NA+++ R+ VDGIP  ++I  D  V+  L+G +P+ +L +++DALL  + LP+ G
Sbjct:   11 AAAASALAAVGLFCYQRAHPPEPLQLLRAMARESPPLAVCLANGKPTVVDFYADWCSNCKAMAPTMRALEKEYAGRVNFLAVDGADPRNADLVGRFRVDGIPHLALITADHEVETALIGMVPKPILEEEMDALLAAKPLPWVG 153          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S2IDK6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IDK6_9EUKA)

HSP 1 Score: 106 bits (265), Expect = 3.560e-25
Identity = 52/150 (34.67%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   23 DKRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFPG 172
            ++R+    A  + L   A +  Q+ +P +  +LL  M   S S      + +PTL+EF   WC++CK SA  +  +E +Y  +VNF+V NGDD +NA+++  + VDG+P  S+I  +  ++  L+G IP  V+   +DAL  GQ  P  G
Sbjct:   79 ERRRNVALAIAAPLAAAAVYFNQRANPVNPVALLARMEERSPSLRDALDSGRPTLVEFYAPWCTSCKESAASMMRIEKQYGDRVNFVVVNGDDERNAQLVRLFGVDGVPHLSLINEERKLQSTLIGAIPESVVRASIDALAAGQPAPTFG 228          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S3FAP4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FAP4_9VIRI)

HSP 1 Score: 105 bits (261), Expect = 6.450e-25
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 0
Query:   18 DRDIKDKRKRYTAAFVSVLLGTAAFLAQKF--DPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQ-ELPF 170
            + D K++ K    A  SV  G A FL  KF  +P + A  L  + A +       TN KP+L+EF   WC+ C+A A  V  +E  +   VNF++ N D+PK    LD Y VDGIP F+ ++ D + +  +VG +PR+V+A +LDAL  G+ ELP+
Sbjct:   18 EEDPKERNKLLAGA--SVAAGVALFLGTKFGVNPAAAAPTLATLEARAVDLDTALTNGKPSLVEFYADWCAECRAMAPTVAAVEGDFDRDVNFVMVNVDNPKWYGELDEYGVDGIPHFAFLSGDDTERARMVGVLPREVMAANLDALRAGRVELPY 171          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A2G5E9K0_AQUCA (Thioredoxin domain-containing protein n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5E9K0_AQUCA)

HSP 1 Score: 103 bits (257), Expect = 3.220e-24
Identity = 58/160 (36.25%), Postives = 88/160 (55.00%), Query Frame = 0
Query:    7 ESMEQSRDFIIDRDIKDKRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQ 166
            +S EQ+  FI   +   K      A  S L     FL+ + D   G SL +   A       + +N KPT++EF   WC  C+  A  V+ +E +Y G VNF++ N D+ K  + LD + V+GIP F+ + RDG+ +GN+VGR+PR  L +++DAL  G+
Sbjct:   31 QSSEQNAGFI---EFPTKTINRIVALASTLAAVGLFLSARLD--FGVSLKDLSAAALPYEEAL-SNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKGNVNFVMLNVDNTKWEQELDEFGVEGIPHFTFLDRDGNEEGNVVGRLPRQYLLENVDALARGE 184          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A7S2Y9T4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9T4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.380e-23
Identity = 51/147 (34.69%), Postives = 86/147 (58.50%), Query Frame = 0
Query:   22 KDKRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQEL 168
            + +++    A  S+LL  +++L Q   P +   LL  M  +S   SVIG N KPT+++F   WC NCK  A  +  +E +Y  +VNF++ +GD  ++   ++ + VD IP  ++++ +G V+  L+G IP+ VL  DLD LL+  +L
Sbjct:  124 ESRQRNLAVAVTSILLAISSYLWQFTHPITPVQLLFGMQQNSQPISVIGNNQKPTVVDFWAPWCENCKLIAPTLRQVEEEYKDRVNFVMVDGDKGESWPYIEAFGVDAIPHLALVSAEGDVETALIGPIPKHVLEADLDVLLDNAKL 270          
BLAST of Gcaud9462.t1 vs. uniprot
Match: A0A1Z5JSP5_FISSO (Thioredoxin domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSP5_FISSO)

HSP 1 Score: 102 bits (253), Expect = 2.620e-23
Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 0
Query:   24 KRKRYTAAFVSVLLGTAAFLAQKFDPNSGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLENKYMGQVNFLVFNGD--DPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRIPRDVLAKDLDALLEGQELPFP 171
            +++    A V++ L    +  Q   P +  SLL  M   S +P +IGTNNKPTL++F   WC NC+  A  +  L  +Y  Q+NF+  N D  D     +++ + VD IP  +++   G V+  L+G +P+ +L+ DLD LL    +  P
Sbjct:   51 RQRNVVVAIVAIALAIGQYAWQFTHPVTPVSLLMQMTQESSAPQIIGTNNKPTLVDFWAPWCENCRIMAPTLRALHEEYKDQINFVTINADATDRNPWPLINAFGVDAIPHLALVNAQGDVETALIGLVPKSILSADLDVLLRNAAIDCP 200          
The following BLAST results are available for this feature:
BLAST of Gcaud9462.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ICL6_9FLOR3.750e-8264.29Thioredoxin domain-containing protein n=1 Tax=Grac... [more]
A0A7S2ZJY3_9RHOD5.210e-3539.74Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G739_9RHOD7.550e-3540.91Hypothetical protein (Fragment) n=2 Tax=Rhodosorus... [more]
A0A7S2V5P4_9STRA1.290e-3035.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXL6_HETAK5.760e-3040.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2IDK6_9EUKA3.560e-2534.67Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3FAP4_9VIRI6.450e-2539.10Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A2G5E9K0_AQUCA3.220e-2436.25Thioredoxin domain-containing protein n=2 Tax=Aqui... [more]
A0A7S2Y9T4_9STRA1.380e-2334.69Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5JSP5_FISSO2.620e-2333.33Thioredoxin domain-containing protein n=2 Tax=Fist... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 69..160
e-value: 1.1E-11
score: 44.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 35..164
score: 12.508444
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 63..167
e-value: 6.7E-19
score: 69.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..184
IPR044241Thiol:disulfide interchange protein TxlA/HCF164PANTHERPTHR47353THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTICcoord: 19..167
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 67..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_258_length_33686_cov_5.184015contigNODE_258_length_33686_cov_5.184015:31303..31857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9462.t1Gcaud9462.t1Gracilaria caudata M_176_S67 malemRNANODE_258_length_33686_cov_5.184015 31303..31857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9462.t1 ID=Gcaud9462.t1|Name=Gcaud9462.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=185bp
MLGKSKESMEQSRDFIIDRDIKDKRKRYTAAFVSVLLGTAAFLAQKFDPN
SGASLLEFMYAHSDSPSVIGTNNKPTLLEFSTTWCSNCKASARGVFDLEN
KYMGQVNFLVFNGDDPKNAEILDRYSVDGIPQFSMIARDGSVKGNLVGRI
PRDVLAKDLDALLEGQELPFPGLRLDELRQASEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR044241TxlA/HCF164
IPR036249Thioredoxin-like_sf