Gcaud9581.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9581.t1
Unique NameGcaud9581.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length356
Homology
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A2V3IT28_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT28_9FLOR)

HSP 1 Score: 506 bits (1304), Expect = 7.750e-161
Identity = 270/449 (60.13%), Postives = 307/449 (68.37%), Query Frame = 0
Query:    1 MLTPKMGYSPLLAINAKFNGWIYDPKIREIRVSSEQVLELS--ASSPAAXXXXXXXXXXXXPA-----QSPSRGVDTVTVDATIVQKRGRGKAFVVSEAAGFVSPTTGDGLEFDADRVDERVVAHAHGAGEMFEQFFHVEICLRHLAELHAKYTSVWVEWIYNDMVIDRSVIRDLSTSAEWKGFGASFDNYTLQGE---------------------------------------------------------------------------------------YRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITVVPPGG 355
            + TP +GYSPLLAINAK NGWIYDPKIREIRV+ +  + ++  AS  +A            PA      +P R  D    +  IVQKR RG+AFV+SE  GFVS   GDGLEFDA+R+ ER+V H+ G GEMFEQ+FHVEICLRHL+ELHA YTSVWVEW+YND+VIDRSVIRD+++S +WKGFGASFDNYTLQGE                                                                                       YRAA LRASARITPVDSSSYSYR+MLS+LPNGEWTVRVNVFELRNLR +D+SGSSDPFV ATVMGITKKTGRQ+QTLSCMVN+LLFFSSVRTGLEFEDEKIV++VMDW+RTGAPK+IGVYTVDAKRML+LP HE+YRKWFALQ+P GGKRPAGFIKMSITVVPPGG
Sbjct:  298 LATPNLGYSPLLAINAKLNGWIYDPKIREIRVTDDDQVTVTHPASPSSAAERSLPHSESESPAGTAASPAPKRTADGNNHNTPIVQKRDRGQAFVLSEGNGFVSQPKGDGLEFDAERITERLVPHSEGGGEMFEQYFHVEICLRHLSELHANYTSVWVEWLYNDVVIDRSVIRDITSSNDWKGFGASFDNYTLQGEVRLPMRADTTVVKGGFVDVPVRLVLRGRHGLPLYGNDGARRYMRDSPHASVIGEIQLSALRIGIGTDIDGITRSELRIPLHALGCEQYRAAVLRASARITPVDSSSYSYRQMLSQLPNGEWTVRVNVFELRNLRGVDNSGSSDPFVSATVMGITKKTGRQKQTLSCMVNQLLFFSSVRTGLEFEDEKIVIDVMDWSRTGAPKQIGVYTVDAKRMLELPAHEMYRKWFALQDPRGGKRPAGFIKMSITVVPPGG 746          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A2V3IYT3_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYT3_9FLOR)

HSP 1 Score: 266 bits (680), Expect = 1.670e-83
Identity = 142/204 (69.61%), Postives = 158/204 (77.45%), Query Frame = 0
Query:  163 SVIRDLSTSAEWKGFGASFDNYTLQG-----------EYRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITVVPPGG 355
            SVI ++  SA   G G   D  T               YRAA  RAS RITPVDSSSYSYR+MLS+L NGEWTVRVNVFELRNL+ +D S SSD FV ATVM ITKKTGRQ+Q L+CMVN+LLF SSVRTGLEFEDEK V+EVMDW+ T A K+IGVYTVDAKRM++LP HE+YRKWFALQ+P GGKR AGFIKMSITVVPPGG
Sbjct:   51 SVICEIQLSALQIGIGTDIDGITRSEVRIPLHALGCENYRAAIFRASGRITPVDSSSYSYRQMLSQLLNGEWTVRVNVFELRNLQGVDISESSDRFVSATVMVITKKTGRQKQMLTCMVNKLLFSSSVRTGLEFEDEKTVIEVMDWSCTDASKQIGVYTVDAKRMIELPAHEMYRKWFALQDPRGGKRRAGFIKMSITVVPPGG 254          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A2V3IHU3_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHU3_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 2.950e-70
Identity = 123/183 (67.21%), Postives = 142/183 (77.60%), Query Frame = 0
Query:  163 SVIRDLSTSAEWKGFGASFDN----------YTLQGE-YRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNP 334
            SVI ++  SA   G G   D           + L  E YRAA  RASARITPVDSSSYSYR+MLS+L N EWTVRVNVFELRNLR ++ S SSD FV ATVM ITKKTG Q+QT++CMVN+LLFFSSVRTGLEFEDEKIV+E +DW+ T A K+IGVYTVD+KRML+LP HE+YRKWFALQ+P
Sbjct:    8 SVIGEIQLSALQIGIGTDIDGIARSEVRIPLHALGCENYRAAIFRASARITPVDSSSYSYRQMLSQLLNAEWTVRVNVFELRNLRGVEISESSDRFVSATVMVITKKTGLQKQTMTCMVNQLLFFSSVRTGLEFEDEKIVIEYIDWSCTYASKQIGVYTVDSKRMLELPAHEMYRKWFALQDP 190          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A2V3IKZ9_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKZ9_9FLOR)

HSP 1 Score: 227 bits (579), Expect = 5.030e-70
Identity = 112/142 (78.87%), Postives = 125/142 (88.03%), Query Frame = 0
Query:  214 MLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITVVPPGG 355
            ML+ LPNGEWTVRVNVFELRNLR +D S SSD FV ATV  ITKKTGRQ+QTL+C+ N+LLFFSSVRTGLEFEDEKI +++MDWNRTGA K+IGVYTVDAKRML+LP HE+YR WFALQ+P GGKR AGFIKMSI VVPP G
Sbjct:    1 MLNPLPNGEWTVRVNVFELRNLRGVDISESSDTFVFATVTVITKKTGRQQQTLTCIANQLLFFSSVRTGLEFEDEKIDIDIMDWNRTGASKQIGVYTVDAKRMLELPAHEIYRTWFALQDPRGGKRRAGFIKMSIIVVPPVG 142          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A2V3IGX1_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGX1_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 2.230e-67
Identity = 109/134 (81.34%), Postives = 121/134 (90.30%), Query Frame = 0
Query:  189 EYRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGH 322
            +Y AA LRASARITPVDSSSYSYR+MLS+LPNGEW VRVN FELRNLR +D S SSDPFV ATV+ ITKKTG Q+QTLSCMVN+LLFFSSVRTGLEFEDEKIV++VMDW+RTG PK+I VYTVDAKRML+ PGH
Sbjct:   45 QYPAAVLRASARITPVDSSSYSYRQMLSQLPNGEWRVRVNAFELRNLRGVDISESSDPFVPATVIVITKKTGCQKQTLSCMVNQLLFFSSVRTGLEFEDEKIVIDVMDWSRTGTPKQIAVYTVDAKRMLEFPGH 178          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A2V3ILC1_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILC1_9FLOR)

HSP 1 Score: 218 bits (555), Expect = 8.510e-66
Identity = 110/137 (80.29%), Postives = 119/137 (86.86%), Query Frame = 0
Query:  219 PNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITVVPPGG 355
            PNGEWTVRVNVFELRNLR +D S  SD F+ ATVM ITKKTG Q+QTL+ MVN LLFFSSV TGLEFEDEKIV+EVMDW+RT A KKIGVYTVDAKRML+LP HE+YRKWFALQ+P  GK  AGFIKMSITVVPPGG
Sbjct:   37 PNGEWTVRVNVFELRNLRGVDISEGSDRFLSATVMVITKKTGCQKQTLTFMVNLLLFFSSVHTGLEFEDEKIVIEVMDWSRTDASKKIGVYTVDAKRMLELPAHEMYRKWFALQDPREGKHRAGFIKMSITVVPPGG 173          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A1X6NMX4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMX4_PORUM)

HSP 1 Score: 204 bits (519), Expect = 6.450e-55
Identity = 101/166 (60.84%), Postives = 125/166 (75.30%), Query Frame = 0
Query:  190 YRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITVVPPGG 355
            YR+A L A A I  V++SSYSYR+ LS LP GEWTVR  V ELRNLR +D SGSSDP+V  T +  TK T  QR+TL+C+V++LLFFS V TG++ E +++ VEVMDWNR  A   IG YT+DA+++LD PG E+  KWFAL NP GGKRPAGFIK+S+ V PPGG
Sbjct:  421 YRSAVLVARATIDTVNASSYSYRQYLSPLPAGEWTVRATVHELRNLRGVDLSGSSDPYVSITALDGTKSTDTQRKTLTCVVDQLLFFSKVLTGVQMEQQRVKVEVMDWNRFAASVVIGTYTLDARKILDAPGGEIAAKWFALSNPMGGKRPAGFIKLSVAVQPPGG 586          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A5J4YJM4_PORPP (Dysferlin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJM4_PORPP)

HSP 1 Score: 154 bits (389), Expect = 1.160e-37
Identity = 72/167 (43.11%), Postives = 104/167 (62.28%), Query Frame = 0
Query:  189 EYRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITVVPPGG 355
            +Y  A       +T V  SSYSYR  +S LP+G+W++R+++FE+R L   DD+GSSDP+V       TK T   RQTLSC+V+E+L F+   TG E E+ K  + V DWN   +PK IG    D   +  LP  E+YR+WFA+ +P  G +  G++K+S++V+ PGG
Sbjct:  724 DYHCAVAFVKTSVTVVHHSSYSYRERVSSLPSGDWSLRIHIFEMRALSAADDTGSSDPYVEVEAFKTTKTTNMFRQTLSCVVDEMLVFNQALTGSELEEAKAKLSVFDWNFMSSPKLIGQIFFDVSNIYRLPNQEIYRQWFAVYHPEKGSKAQGYLKLSVSVLAPGG 890          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A7S0BG31_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BG31_9RHOD)

HSP 1 Score: 136 bits (342), Expect = 7.510e-32
Identity = 76/172 (44.19%), Postives = 105/172 (61.05%), Query Frame = 0
Query:  190 YRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSV-RTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGK-----RPAGFIKMSITVVPPGG 355
            YRAA L  +A +  VD++SYSYR   + +P GEWTVRVNV+E R+L V+   GSSDPF   T+ G+ K+T +     SC+V+E L+F  V  +  EF  E I ++V DW   G  K +G   ++ K + ++  HE++R+WF L  PS  K        GFIK+SITVVPP G
Sbjct:  306 YRAAVLHCNAEVRLVDNTSYSYRDKATSIPVGEWTVRVNVYEFRSLHVIASGGSSDPFAEVTLFGLKKRTKKVSNATSCVVDETLYFRKVVDSPAEFATEDIRIDVTDWGLFGN-KPLGHLIMNLKSIYEMDNHELFREWFPLIVPSSMKVVNPFSANGFIKLSITVVPPKG 476          
BLAST of Gcaud9581.t1 vs. uniprot
Match: A0A7S3A4P5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A4P5_9RHOD)

HSP 1 Score: 132 bits (331), Expect = 4.950e-30
Identity = 73/172 (42.44%), Postives = 105/172 (61.05%), Query Frame = 0
Query:  190 YRAAGLRASARITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCATVMGITKKTGRQRQTLSCMVNELLFFSSV-RTGLEFEDEKIVVEVMDWNRTGAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGK-----RPAGFIKMSITVVPPGG 355
            YRAA L  +A +  VD++SYSYR  ++ +P GEWTVRVNV+E R+L V+   GSSDPF   ++ G  K+T +     SC+V+E L+F  V  +  EF  E I ++V DW   G  K +G   ++ K + ++  HE++R+WF L  P+  K        GFIK+SITV+PP G
Sbjct:  630 YRAAVLHCNAEVRLVDNTSYSYRDKVTSVPVGEWTVRVNVYEFRSLHVISSGGSSDPFAEVSLFGKKKRTKKVSNATSCVVDETLYFRKVVDSPAEFATEDIRIDVTDWGFFGN-KALGHLIMNLKSIYEMDSHEIFREWFPLIVPASMKVANPFSANGFIKLSITVMPPKG 800          
The following BLAST results are available for this feature:
BLAST of Gcaud9581.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A2V3IT28_9FLOR7.750e-16160.13Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IYT3_9FLOR1.670e-8369.61Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IHU3_9FLOR2.950e-7067.21Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IKZ9_9FLOR5.030e-7078.87Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IGX1_9FLOR2.230e-6781.34Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3ILC1_9FLOR8.510e-6680.29Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A1X6NMX4_PORUM6.450e-5560.84Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YJM4_PORPP1.160e-3743.11Dysferlin n=1 Tax=Porphyridium purpureum TaxID=356... [more]
A0A7S0BG31_9RHOD7.510e-3244.19Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S3A4P5_9RHOD4.950e-3042.44Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 224..325
e-value: 3.0E-5
score: 33.5
IPR000008C2 domainPFAMPF00168C2coord: 223..331
e-value: 1.2E-10
score: 41.6
IPR000008C2 domainPROSITEPS50004C2coord: 203..329
score: 13.70978
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 222..356
e-value: 3.7E-18
score: 68.0
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 220..352
NoneNo IPR availablePANTHERPTHR12546:SF33C2 CALCIUM-DEPENDENT MEMBRANE TARGETINGcoord: 218..354
IPR037721Ferlin familyPANTHERPTHR12546FER-1-LIKEcoord: 218..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_247_length_34315_cov_4.656002contigNODE_247_length_34315_cov_4.656002:33016..34315 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9581.t1Gcaud9581.t1Gracilaria caudata M_176_S67 malemRNANODE_247_length_34315_cov_4.656002 33016..34315 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9581.t1 ID=Gcaud9581.t1|Name=Gcaud9581.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=356bp
MLTPKMGYSPLLAINAKFNGWIYDPKIREIRVSSEQVLELSASSPAAAAS
ASASASAHSPAQSPSRGVDTVTVDATIVQKRGRGKAFVVSEAAGFVSPTT
GDGLEFDADRVDERVVAHAHGAGEMFEQFFHVEICLRHLAELHAKYTSVW
VEWIYNDMVIDRSVIRDLSTSAEWKGFGASFDNYTLQGEYRAAGLRASAR
ITPVDSSSYSYRRMLSRLPNGEWTVRVNVFELRNLRVMDDSGSSDPFVCA
TVMGITKKTGRQRQTLSCMVNELLFFSSVRTGLEFEDEKIVVEVMDWNRT
GAPKKIGVYTVDAKRMLDLPGHEVYRKWFALQNPSGGKRPAGFIKMSITV
VPPGGX
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf
IPR037721Ferlin