Gcaud233.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud233.t1
Unique NameGcaud233.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length348
Homology
BLAST of Gcaud233.t1 vs. uniprot
Match: A0A2V3ICK7_9FLOR (Uncharacterized protein n=5 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICK7_9FLOR)

HSP 1 Score: 164 bits (415), Expect = 4.490e-44
Identity = 92/214 (42.99%), Postives = 127/214 (59.35%), Query Frame = 0
Query:  131 EIIDLTLESNADDITDGNGVNRSAILDDTNADSSGTYPTQTAWRIWINSLMKKNPRFFDSPEALLMSRRKTRQGISAYKGIGATTKNCEGLRSVIEYFLDTECQ-GSSEALKQKKLSNLGTTVSQFLRWCVASSSCHAYDAWRRDCLFHNICNLMLVEQFVAYFQVRCENRTAKQKADDLLVVCEAAYPTLGR-RKSEVDRVSIVLESIANARR 342
            ++IDL  E  ++  T   G +     + +N + + T  T+ AWR  I +L KKNPR FD+ EA +  R K +QG + Y GIG  T NC+GLRSV+++    E     SE  K++    L TTVSQFLRWCVA+S+CH YD W+R  LF N+ N  LVE F+ YF  RC  RT   KA+ L  +CEAA PTL   ++ ++  V  +L+SI +  R
Sbjct:  140 DVIDLVSEGESETSTGVKGEDCGG--EPSNGNGNVTSRTEAAWRFRIKALKKKNPRIFDNKEARMEIRTKAKQGHTVYMGIGVDTSNCDGLRSVMDFVCCPEFNLNPSERWKKE----LRTTVSQFLRWCVANSACHKYDVWKRSALFENVSNKTLVETFLGYFLERCSTRTFYSKAEQLSAICEAARPTLNESQRGKLGEVIAILDSIGHRTR 347          
BLAST of Gcaud233.t1 vs. uniprot
Match: A0A2V3IBT3_9FLOR (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT3_9FLOR)

HSP 1 Score: 87.8 bits (216), Expect = 2.190e-15
Identity = 58/188 (30.85%), Postives = 88/188 (46.81%), Query Frame = 0
Query:  161 ADSSGTY----PTQTAWRIWINSLMKKNPRFFDSPEALLMSRRKTRQGISAYKGIGATTKNCEGLRSVIEYFLDTECQGSSEALKQKKLSNLGTTVSQFLRWCVASSSCHAYDAWRRDCLFHNICNLMLVEQFVAYFQVRCENRTAKQKADDLLVVCEAAYPTLGRRK--SEVDRVSIVLESIANARR 342
            A+  GTY      ++ W   +  L K +P+ F+     L+  R    G   +KGIGAT KNC GLR V E +     Q + +       ++L TTVSQFLRW + +S+C   D W+   LF  + +  +V +F+    +R    T K +   +  VC+      G       +  V IVL+ + NA R
Sbjct:  122 AELKGTYLLERSYESRWYEQLRHLEKCHPKLFE-----LLEVRDAGPGTFYFKGIGATVKNCLGLRRVYETYYKPRLQNNGKGAAA--FTHLSTTVSQFLRWAICTSTCSRKDVWKEHVLFRALADQKVVNRFIEMLMLRSSPGTVKNRITSMKRVCDVGVIISGDTAIGMRLKLVLIVLQHMENASR 302          
The following BLAST results are available for this feature:
BLAST of Gcaud233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ICK7_9FLOR4.490e-4442.99Uncharacterized protein n=5 Tax=Gracilariopsis cho... [more]
A0A2V3IBT3_9FLOR2.190e-1530.85Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2399_length_5807_cov_4.808083contigNODE_2399_length_5807_cov_4.808083:536..1579 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud233.t1Gcaud233.t1Gracilaria caudata M_176_S67 malemRNANODE_2399_length_5807_cov_4.808083 536..1579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud233.t1 ID=Gcaud233.t1|Name=Gcaud233.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=348bp
MAYRFPYMRSRTNDAHFHEILSSNSDEEYPFPPMCLSDDEHHTSVPGRVP
PGELESSANEGLAVSGIGIVYDDDVSASAAKCLSRGRKRRYNEHDEGTTR
PRKVSKKTPSNPTQASSTSVRRRSVEAARVEIIDLTLESNADDITDGNGV
NRSAILDDTNADSSGTYPTQTAWRIWINSLMKKNPRFFDSPEALLMSRRK
TRQGISAYKGIGATTKNCEGLRSVIEYFLDTECQGSSEALKQKKLSNLGT
TVSQFLRWCVASSSCHAYDAWRRDCLFHNICNLMLVEQFVAYFQVRCENR
TAKQKADDLLVVCEAAYPTLGRRKSEVDRVSIVLESIANARRGRSKH*
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