Gcaud7216.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7216.t2
Unique NameGcaud7216.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length491
Homology
BLAST of Gcaud7216.t2 vs. uniprot
Match: A0A2V3IN29_9FLOR (58 kDa phosphoprotein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN29_9FLOR)

HSP 1 Score: 475 bits (1222), Expect = 1.240e-160
Identity = 278/478 (58.16%), Postives = 328/478 (68.62%), Query Frame = 0
Query:    2 NPTDIHDSRLAFLRSFLVSFNAELPSPDSKQDVVRTVDGLPSWKALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIKTAAESDTDATXXXXXXXXXXXXXXXXREGAQADVQEEADLEDDDEKALLEENALIEELNRDAGVLPVEERDENPEELPLGDIHAELSEADVDRMIELKQEASQMAAAKDWNAALYKYNELMTLKPSTLALAKRAEVLLHLKRPYAGIRDCETALKENESSAKALKTR---------------------------EAGQAETEVEMRWNQIRELRLKRDAKKRDLAAAKERKERERRRQEAVKRYEEEKAKETAQREFKPSQSEQDVPPGGMAGLDGLLSGLNLSSDVKEKLKKPEVKEKLMTIFQELQGSTPDKAMSNVLKYISDPDVGPVVQAVMASMMGGA 452
            NP++IHDSRL FLRS+L S NAE+P+  S    VR+VD L SWK LL EAGSTPVVVDAFATWCGPC+AI+P Y++ A EY+GRVIF+R+DVD+A DLA EMN+SAMPTFR+FK+G EI S +GADP KLE MIK AAE  TD                   +  Q             +KA+ EE+AL+EE NRDAGVL +E+RD NP ELP+GD+HA+LSEAD+DRMI LKQEASQ AA+++W AAL KYNELM L PSTL+LAKRA+VLLHLKRP A IRDCETAL EN+SSAKALKTR                           EAG+AETEVEMRWNQIRELRLKRDAK+R+ A  KE+K                            +  EQD   G    LD LL  LNL +DVKEK+K+PEV+ KLM +FQE+Q STPDKAMS++LKYI DPDVGP+VQA M+SMMGGA
Sbjct:   19 NPSEIHDSRLTFLRSYLASLNAEMPAVQSGP--VRSVDSLESWKKLLDEAGSTPVVVDAFATWCGPCKAIAPLYEKFAVEYKGRVIFSRYDVDKATDLAAEMNVSAMPTFRLFKDGKEIGSLVGADPNKLEDMIKKAAEDRTDTNGGMKEEHVHEEKM---EDAQQXXXXXXXXXXXXXKKAIEEEHALVEEFNRDAGVLAMEDRDTNPSELPVGDMHAKLSEADIDRMISLKQEASQYAASEEWEAALEKYNELMGLSPSTLSLAKRADVLLHLKRPCAAIRDCETALAENDSSAKALKTRGKAYAMIGEWEKAAKDLQKGNALDFDEEAGRAETEVEMRWNQIRELRLKRDAKRREKAVEKEKKXXXXXXXXXXXXXXX--XXXXXXXXXXANFKEQDST-GSTPNLDTLLGSLNLPADVKEKVKRPEVRAKLMKVFQEMQSSTPDKAMSSILKYIGDPDVGPIVQAAMSSMMGGA 488          
BLAST of Gcaud7216.t2 vs. uniprot
Match: R7QLG7_CHOCR (Thioredoxin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG7_CHOCR)

HSP 1 Score: 257 bits (657), Expect = 1.150e-75
Identity = 186/535 (34.77%), Postives = 272/535 (50.84%), Query Frame = 0
Query:    2 NPTDIHDSRLAFLRSFLVSFNAELPSPDSKQDV---VRTVDGLPSWKALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIKTAAESDTDATXXXXXXXXXXXXXXXXREGAQADVQEEADLEDDDEKALLEENA---LIEELNRDAGVLPVEERDENPEELPLGDIHAELSEADVDRMIELKQEASQMAAAKDWNAALYKYNELMTLKPSTLALAKRAEVLLHLKRPYAGIRDCETALKENESSAKALKTR---------------------------EAGQAETEVEMRWNQIRELRLKRDAKKRDLAAAKERKERERRRQEAVKRYEEEKAKETAQREFKPSQSEQDVPPGGMA--------------------------------------------------------------GLDGLLSGLNLSSDVKEKLKKPEVKEKLMTIFQELQGSTPDKAMSNVLKYISDPDVGPVV 441
            +P  +HD  L+FL+ +LVS  A LP  ++  +    +RT+  L    AL AE GS P++ D +A WCGPC+ I+P +  L++++   V+FA+ +VD A D+AR+ ++S+MPTF +  NG ++   +GA P KLEAM++ AA   T                    EG    V +   L+D +E+A  +E A   LI+ L  DA VLP ++RD NP E+P+G    ELSEAD+D+ IELK +AS + A+ D   A+  +NE++ +  S L LAKRA+V L LK+P+A IRDC+ AL  N  SAK+LK R                            AG+ +  VE RWN+IRE RL+++A+ RD    K+ + +   R  A++ YE   A++ A  E   S S     PGGM                                                                ++ +L GL+L +DV+ K+  P VKEKL T+F ELQG+ P  AM   +KY+ DPDVGP++
Sbjct:   15 SPALLHDPELSFLKDYLVSLGATLPPAETASNSKPGMRTISSLADLDALSAEVGSKPIIADFYADWCGPCKVIAPLFKTLSEKHTN-VVFAKVNVDLAEDVARKYDVSSMPTFIVLVNGEQVAQTIGAVPAKLEAMVEKAAGGVT----------------ADEDEGEATPVPDPEPLDDMEEEARKDEEAERDLIQHLENDADVLPEDQRDVNPAEVPMGAFDVELSEADMDKQIELKGKASGLVASGDLQGAIAVWNEVIAISASPLTLAKRADVFLKLKQPHAAIRDCDKALSANPDSAKSLKIRGMAYHLLGDWEQAAHSLQKGNGLDYDETAGEVQRVVEERWNKIREFRLQKEARARDRDVKKKAQVKAAARAAAIREYE---AQKKADEEAASSGSRG--MPGGMXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXXXXXXXXXMPGGXXXGXXXXXXXXXXXXXXDAESVEKMLDGLDLPADVQAKMDDPAVKEKLKTVFTELQGN-PTAAMGTAMKYMGDPDVGPIL 526          
BLAST of Gcaud7216.t2 vs. uniprot
Match: A0A3S3QB26_9ACAR (Thioredoxin n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3QB26_9ACAR)

HSP 1 Score: 104 bits (260), Expect = 1.790e-23
Identity = 51/102 (50.00%), Postives = 68/102 (66.67%), Query Frame = 0
Query:   35 VRTVDGLPSWKALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIK 136
            V  V     + A L EAGS  VVVD FATWCGPC+AI+P  ++LA++ +  V+F + DVD+   +A E  I+AMPTF+ FKN  EID F GA+ KKL  +I+
Sbjct:    3 VHLVKDQADFNAKLEEAGSKLVVVDFFATWCGPCKAIAPCIEKLAEQLKDSVVFLKVDVDENESIATEYKITAMPTFKFFKNKTEIDEFSGANEKKLTELIE 104          
BLAST of Gcaud7216.t2 vs. uniprot
Match: A0A7S1XCA8_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XCA8_9RHOD)

HSP 1 Score: 112 bits (279), Expect = 2.180e-23
Identity = 91/265 (34.34%), Postives = 137/265 (51.70%), Query Frame = 0
Query:  214 PLGDIHAELSEADVDRMIELKQEASQMAAAKDWNAALYKYNELMTLKPSTLALAKRAEVLLHLKRPYAGIRDCETALKENESSAKALKTR---------------------------EAGQAETEVEMRWNQIRELRLKRDAKKRDLAAAKERKERERRRQEAVKRYEEEKAKETAQREFKPSQSEQDVPPGGMAGLDGLLSGLNLSSDVKEKLKKPEVKEKLMTIFQELQGSTPDKAMSNVLKYISDPDVGPVVQAVMASMMGG 451
            P+GD  AE+++AD+++  E +  A ++ +   +  AL K+N+++ ++PS L  AKRAEV L LK+P A IRDC  AL  N  SAK+ K R                           E  + E  V+ RW+ IR  RL++ AK R+  AA  R+ER R           E AK  A+   + ++  ++ P GG  G  G+    ++    KE++K P V+EKL  +  +LQ S P     N LKY+SDPD+ P++Q +M    GG
Sbjct:  105 PMGDPAAEVTDADLEKQAEARAAAQELLSEGKYEDALDKWNQVIEIRPSPLLYAKRAEVFLILKKPNAAIRDCTAALSINPDSAKSFKVRGKAYRMLGDWERSAHDLQEGNRIDFDEETFEVEKLVDSRWHIIRTQRLRKLAKVREKEAA-ARRERAR-----------EAAKAHAEAARRAAEETENSPSGG--GFGGM-PPFSMDEATKERMKDPAVQEKLTQMLADLQ-SNP----MNALKYMSDPDLAPILQGLMGQFAGG 349          
BLAST of Gcaud7216.t2 vs. uniprot
Match: UPI00077A561A (thioredoxin-2-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A561A)

HSP 1 Score: 103 bits (258), Expect = 4.050e-23
Identity = 47/89 (52.81%), Postives = 65/89 (73.03%), Query Frame = 0
Query:   48 LAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIK 136
            L EAG   VVVD FATWCGPC+ +SPT  +LA+EY  +V FA+ DVD+  D A E  ISAMPTF ++K+  ++DSF GA+ +KL+ +++
Sbjct:   22 LKEAGEKLVVVDFFATWCGPCKKMSPTIKKLAEEYADKVFFAKVDVDENADTAEEQEISAMPTFMLYKSRRKVDSFTGANAEKLKELVQ 110          
BLAST of Gcaud7216.t2 vs. uniprot
Match: A0A0C9RZK8_9HYME (Thioredoxin n=6 Tax=Endopterygota TaxID=33392 RepID=A0A0C9RZK8_9HYME)

HSP 1 Score: 103 bits (257), Expect = 4.560e-23
Identity = 49/95 (51.58%), Postives = 65/95 (68.42%), Query Frame = 0
Query:   45 KALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIKTAA 139
            K  L EAG+  VV+D FATWCGPC+ I+P  + LAKEY+GRV+  + DVD+  D+A E NIS+MPTF   K   +I SF GA+P+KL   ++  A
Sbjct:   12 KNQLKEAGAKLVVIDFFATWCGPCKIIAPRLEELAKEYEGRVVVLKVDVDECEDIAMEYNISSMPTFVFIKGSQQIYSFAGANPEKLADYVEKNA 106          
BLAST of Gcaud7216.t2 vs. uniprot
Match: W8BIP6_CERCA (Thioredoxin n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BIP6_CERCA)

HSP 1 Score: 102 bits (255), Expect = 8.650e-23
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0
Query:   48 LAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKL 131
            L EAG   VV+D FATWCGPC+ I+PT D LAKEY+GR++  + DVD+  D+A + N+S+MPTF   K   +I SF GA  KKL
Sbjct:   15 LKEAGEKLVVIDFFATWCGPCKIIAPTLDELAKEYEGRIVVLKVDVDECEDIAMQYNVSSMPTFVFIKQTKQISSFSGASAKKL 98          
BLAST of Gcaud7216.t2 vs. uniprot
Match: A0A3B3T8M9_9TELE (Thioredoxin n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T8M9_9TELE)

HSP 1 Score: 102 bits (254), Expect = 1.160e-22
Identity = 47/103 (45.63%), Postives = 68/103 (66.02%), Query Frame = 0
Query:   34 VVRTVDGLPSWKALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIK 136
            +VR ++    +   L +AG   VV+D  ATWCGPC+AI+P + +L+ +YQ  V+F + DVD+A D+A    +S MPTF+ +KNG +I  F GAD  KLE M+K
Sbjct:    1 MVREINNQADFDKTLKDAGQKLVVIDFTATWCGPCKAIAPIFQKLSDDYQN-VVFLKVDVDEAQDVASSCGVSCMPTFQFYKNGVKIGEFSGADKNKLEEMVK 102          
BLAST of Gcaud7216.t2 vs. uniprot
Match: R7QFI8_CHOCR (Thioredoxin domain containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFI8_CHOCR)

HSP 1 Score: 109 bits (273), Expect = 3.300e-22
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 0
Query:   38 VDGLPSWKALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIKTAAESDTDAT 146
            V  L +++ +L  +G   VVVD  ATWCGPC AI+P Y++L+++Y GR  F + DVD+A D+A+  ++SAMPTF M+  GN +  F GAD  KL A ++  A S +D +
Sbjct:    6 VSSLSAFQTILNTSGKKLVVVDFHATWCGPCHAIAPFYEKLSRKYAGRARFIKVDVDEAQDVAQHCSVSAMPTFHMYMKGNRVSDFSGADSSKLAAEVERCAPSSSDVS 114          
BLAST of Gcaud7216.t2 vs. uniprot
Match: UPI00038A5F66 (LECA THIOREDOXIN n=1 Tax=synthetic construct TaxID=32630 RepID=UPI00038A5F66)

HSP 1 Score: 100 bits (250), Expect = 4.280e-22
Identity = 46/102 (45.10%), Postives = 72/102 (70.59%), Query Frame = 0
Query:   34 VVRTVDGLPSWKALLAEAGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLAREMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMI 135
            +V  V     ++A+L+EA    VVVD FATWCGPC+ I+P ++ L++EY  +V+F + DVD+  D+A +  I++MPTF+ FKNG ++D  +GA+ +KL+ MI
Sbjct:    1 MVIQVTNKEEFEAILSEADKL-VVVDFFATWCGPCKMIAPFFEELSEEYPDKVVFIKVDVDEVPDVAAKYGITSMPTFKFFKNGKKVDELVGANQEKLKQMI 101          
The following BLAST results are available for this feature:
BLAST of Gcaud7216.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN29_9FLOR1.240e-16058.1658 kDa phosphoprotein n=1 Tax=Gracilariopsis chord... [more]
R7QLG7_CHOCR1.150e-7534.77Thioredoxin domain-containing protein n=1 Tax=Chon... [more]
A0A3S3QB26_9ACAR1.790e-2350.00Thioredoxin n=1 Tax=Dinothrombium tinctorium TaxID... [more]
A0A7S1XCA8_9RHOD2.180e-2334.34Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
UPI00077A561A4.050e-2352.81thioredoxin-2-like n=1 Tax=Acropora digitifera Tax... [more]
A0A0C9RZK8_9HYME4.560e-2351.58Thioredoxin n=6 Tax=Endopterygota TaxID=33392 RepI... [more]
W8BIP6_CERCA8.650e-2354.76Thioredoxin n=1 Tax=Ceratitis capitata TaxID=7213 ... [more]
A0A3B3T8M9_9TELE1.160e-2245.63Thioredoxin n=1 Tax=Paramormyrops kingsleyae TaxID... [more]
R7QFI8_CHOCR3.300e-2244.95Thioredoxin domain containing protein n=1 Tax=Chon... [more]
UPI00038A5F664.280e-2245.10LECA THIOREDOXIN n=1 Tax=synthetic construct TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..359
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 64..73
score: 61.67
coord: 56..64
score: 48.77
coord: 104..115
score: 35.56
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 27..150
e-value: 6.5E-32
score: 111.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..174
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 42..151
NoneNo IPR availablePANTHERPTHR46115THIOREDOXIN-LIKE PROTEIN 1coord: 42..151
NoneNo IPR availableCDDcd02947TRX_familycoord: 43..136
e-value: 1.13674E-30
score: 112.266
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 44..136
e-value: 4.8E-25
score: 87.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 14..140
score: 13.223242
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 197..367
e-value: 8.4E-11
score: 43.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 224..301
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 27..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2234_length_6365_cov_4.130379contigNODE_2234_length_6365_cov_4.130379:3378..5042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7216.t2Gcaud7216.t2Gracilaria caudata M_176_S67 malemRNANODE_2234_length_6365_cov_4.130379 3378..5042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7216.t2 ID=Gcaud7216.t2|Name=Gcaud7216.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=491bp
LNPTDIHDSRLAFLRSFLVSFNAELPSPDSKQDVVRTVDGLPSWKALLAE
AGSTPVVVDAFATWCGPCRAISPTYDRLAKEYQGRVIFARFDVDQAMDLA
REMNISAMPTFRMFKNGNEIDSFMGADPKKLEAMIKTAAESDTDATADAT
TEPAEQPATEAKREGAQADVQEEADLEDDDEKALLEENALIEELNRDAGV
LPVEERDENPEELPLGDIHAELSEADVDRMIELKQEASQMAAAKDWNAAL
YKYNELMTLKPSTLALAKRAEVLLHLKRPYAGIRDCETALKENESSAKAL
KTREAGQAETEVEMRWNQIRELRLKRDAKKRDLAAAKERKERERRRQEAV
KRYEEEKAKETAQREFKPSQSEQDVPPGGMAGLDGLLSGLNLSSDVKEKL
KKPEVKEKLMTIFQELQGSTPDKAMSNVLKYISDPDVGPVVQAVMASMMG
GAPGAGGGAGAGAGAGAGAGADAGAGGDCRAGCCPADEVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR011990TPR-like_helical_dom_sf
IPR036249Thioredoxin-like_sf