Gcaud2292.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud2292.t1
Unique Name	Gcaud2292.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	603

Homology

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BLAST of Gcaud2292.t1 vs. uniprot
Match: A0A2V3IM16_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM16_9FLOR)

HSP 1 Score: 395 bits (1015), Expect = 3.240e-127
Identity = 276/591 (46.70%), Postives = 353/591 (59.73%), Query Frame = 0

Query:   36 MFMITDTSPASPLVKQRSLHSPHGKVQEKKQLRSPTSYTSAITQSPAVSQSATSDEAKVVRNH--VTFDSPN-AHSSASTVPKHPHSFPSKQNPTNVAQVTLFRAESVAHSPKVSK---IPVSAGNATRAPSGDKVGHDEFGTPKLAPAKSSTRKPAKSIVADFTPPPSKIPTRKRRTPSYARSTKASKRRSQWTKLSTVQRETDRGTNVQHATRLNFSNTIPVSPEVLHRKTGRIRKMPSPKKSTGFKPNPTPRYLHKPRPVVRPTAKSEAVLLGRTRTPPVPSPPSFAQRKPTPTVSKPFNIGSIELHENRMQQIQARRKTQEQEEHRRRNVRPVKLQREILDGPTFVPNLDNKVATVPVDPVPWAAERRERTLAFEAAQRARIAEMDAMKEKAQKMRELAEEERLREEYERKRFRPRPIPRSHYKPDTPPKRRASLAFMYLKEENAERMEDEDGNELGSFFSKLGITDEIHTTSTREQRDENVRRRLSLKAT---------------ERKDLYSIVEQEHETKPSLDQREVGEIQTMNEAN-----KENAVPKSMATHKTTRDSGKQQRQSGLGPMRLFAEIRNTLLG 600
            MF ITDTSP SPL++ R +HS   +  +KKQ  +P S TSA+T+SP VSQSAT    +  R H  V FD  + A SS S  P    +  S  + T   Q+    A S ++   + K    PV    +T   S +  G  E  T K A    S+ KP KSI  +  P PS+IP+ +RRTP YARSTKAS+RRS+      +Q +       +  T ++F+ TIP SPEVL RK  R  K  SP++ T FK  P PRYL  PRPVVRPTAKSEA+L G   +   P PP  A  K + TV KPF + S+ELHE RM++I A+RK +++E  RRR + P+ L RE+L+GPTFVP LD K  T+PVD +PWAAERRERTLA+EAAQRARI EM+AMKE AQ+ RELAEEERLRE+YERK+FRPRP+PRSHY PDTPPKR+A++A + +KE+ A RME E+  EL S FS L ++  +   ST +  +  +       AT               ER     ++    E   S D + V +  ++ E N     KEN +P   A  K   D  +Q  Q  LGPMRLF EIRNTLLG
Sbjct:    1 MFAITDTSPGSPLIQHRRIHSNFKEQPDKKQFGTPNSCTSAVTESPPVSQSATHCSLRHSRPHTRVRFDDTSTARSSGSVTPVPSRTTLSGHDTTPQKQIGSTPATSTSYIRNLQKSAVTPVVEKRSTLVQS-ESFGEHETVTLKSATDFFSSEKPRKSITDNVKPLPSRIPSSRRRTPGYARSTKASRRRSEMRSALFLQSQRKHNNTSKPTTEIDFTKTIPKSPEVLRRKFARTPKEVSPRRRTTFKAKPVPRYLTMPRPVVRPTAKSEAILHGLASS--APMPPVLAACKLSGTVPKPFKLASVELHEARMKKICAKRKAEQEEAERRRVLHPLALNREMLEGPTFVPCLDKKNLTMPVDLLPWAAERRERTLAYEAAQRARIEEMEAMKEIAQRQRELAEEERLREDYERKKFRPRPVPRSHYYPDTPPKRKAAIAVIRIKEDIARRMECEE-EELESVFSALAVSQNLENFSTLKTPENLLSGNDPSSATSKTAEKVGIENAFSSERGRSKQVINTSKENTDS-DSQVVPKNDSLKEGNAIEVGKENIIPVGEAKQK---DRRRQGTQVVLGPMRLFNEIRNTLLG 583

The following BLAST results are available for this feature:

BLAST of Gcaud2292.t1 vs. uniprot

BLAST of Gcaud2292.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IM16_9FLOR	3.240e-127	46.70	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 415..444
None	No IPR available	COILS	Coil	Coil	coord: 336..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 214..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..570
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..589

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_220_length_36054_cov_4.510163	contig	NODE_220_length_36054_cov_4.510163:23082..24890 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2292.t1	Gcaud2292.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_220_length_36054_cov_4.510163 23082..24890 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud2292.t1 ID=Gcaud2292.t1|Name=Gcaud2292.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=603bp
MSEPKKASGDHEESFFTALADVTNRSQKSVRSSGKMFMITDTSPASPLVK
QRSLHSPHGKVQEKKQLRSPTSYTSAITQSPAVSQSATSDEAKVVRNHVT
FDSPNAHSSASTVPKHPHSFPSKQNPTNVAQVTLFRAESVAHSPKVSKIP
VSAGNATRAPSGDKVGHDEFGTPKLAPAKSSTRKPAKSIVADFTPPPSKI
PTRKRRTPSYARSTKASKRRSQWTKLSTVQRETDRGTNVQHATRLNFSNT
IPVSPEVLHRKTGRIRKMPSPKKSTGFKPNPTPRYLHKPRPVVRPTAKSE
AVLLGRTRTPPVPSPPSFAQRKPTPTVSKPFNIGSIELHENRMQQIQARR
KTQEQEEHRRRNVRPVKLQREILDGPTFVPNLDNKVATVPVDPVPWAAER
RERTLAFEAAQRARIAEMDAMKEKAQKMRELAEEERLREEYERKRFRPRP
IPRSHYKPDTPPKRRASLAFMYLKEENAERMEDEDGNELGSFFSKLGITD
EIHTTSTREQRDENVRRRLSLKATERKDLYSIVEQEHETKPSLDQREVGE
IQTMNEANKENAVPKSMATHKTTRDSGKQQRQSGLGPMRLFAEIRNTLLG
HR*