Gcaud7813.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7813.t1
Unique NameGcaud7813.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length299
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud7813.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..258
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..298
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..279
NoneNo IPR availableTMHMMTMhelixcoord: 157..179
NoneNo IPR availableTMHMMTMhelixcoord: 256..278

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_213_length_36751_cov_4.280933contigNODE_213_length_36751_cov_4.280933:21840..22736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7813.t1Gcaud7813.t1Gracilaria caudata M_176_S67 malemRNANODE_213_length_36751_cov_4.280933 21840..22736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7813.t1 ID=Gcaud7813.t1|Name=Gcaud7813.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=299bp
MENQGDATNIRPEAETDVEQSQQSDEQSSEATGNAQPDAADTAASSASND
ATHGSANSPDSPPPNLPATDIHEEVSEQSIQTNARIATVIYDMLIRGSGD
NTENEAYYTELINTFPVSAALAREYATHVAETIFQPMQYAIYVQHTMRRR
RLVLRRVSISSMAMLFGIGSAFLSSLWLWFVISLAIGATLARALNNETFT
STVQFFADPVLKNHGLTRLLYEWVFNFMNQENPIVAIRTHGSMAGIRTSF
SPNLHITTVFLIPIVIGLVYGVIGGVIAITMNMGLNAIGGIRYEAHDD*
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