Gcaud8093.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8093.t1
Unique NameGcaud8093.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length654
Homology
BLAST of Gcaud8093.t1 vs. uniprot
Match: A0A2V3J5K0_9FLOR (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 885 bits (2286), Expect = 0.000e+0
Identity = 458/696 (65.80%), Postives = 524/696 (75.29%), Query Frame = 0
Query:    1 MGIIGFQKWFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKK--TTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRT---------------------------------------GTRGKRQNYVISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRMGAEMSPVVRK---KQGYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIESASEG--STTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFLIQAPISRSRPLLPHEAAMAVLPKHAKHLLPVPLQRMYDNPAMLKKIFTGKDEVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNPRVKKPGQRFEEVRHRPVIYRVPFTMTTLPPCYEWPKGSIPSMLDLSYKTVRGSLLRAKNNVP----AENNGSASKLSERPQRRTHRGVRHIRPRTSPSRRD 646
            MGIIGFQKW LG FP++VRVQ G +FGE YDHVAFDINQILHQ +R+ATNRQTLAAAIFRELDQILKNC+PRKSVFFAFDGPAPLAKL TQRRR  ++   +EYVSDY+DENGV RK K  +PAID LEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNV+IRISGADVPGEGELKL+D+CRT                                       G+RG+RQ+YVISVWEL R FER+FPNESSSVRLDFVLLAILNGNDYIPKVRGISL+RTW RY++LKL S GG   PF G SLVDAEKRTLNWPMFYALMD VGVPV SIAEAEQEK       P  RK   K+GY+S SDSEV E IVYTGNEDG+PMD LDD       ES SE   S TDS +  S++        FDEEQEHIQTL+ LSG+++KFYDT RWVRALLWN+QMYVDG CGDY F+YGKPYGPPI EIL YIR HDGDPFL QAP+S  RPLLPH+AAMAVLPK AKHLLP PLQR+YD+P  ++KIF  KD+V+V S++ E  RIP+SEFS+EELLRT  G+PILLR  R  D + Y NP V++PGQ+FEE+  RPVIYR PF +T+ PPCY+WP+G++ ++L+L YKTV G  LR K   P    +E    + +  ++ +RR HR  R  R R SP R D
Sbjct:    1 MGIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWPMFYALMDRVGVPVSSIAEAEQEKESTPAGVPPRRKRRGKEGYVSYSDSEVGERIVYTGNEDGVPMDCLDDDSVPTRDESFSENGVSETDSYEDSSEYNXXXXXXXFDEEQEHIQTLVTLSGNSSKFYDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQAPVSNWRPLLPHQAAMAVLPKQAKHLLPKPLQRIYDDPVAVRKIFGSKDDVDVPSLIAETDRIPKSEFSSEELLRTFHGTPILLRHQRPQDQLPYSNPWVRRPGQKFEEIASRPVIYRAPFAVTSAPPCYKWPRGTVANLLELPYKTVGGFHLRPKKGAPLPTYSEQAARSRENVDKSRRRAHRSRRQFRHRASPRRTD 696          
BLAST of Gcaud8093.t1 vs. uniprot
Match: R7Q4K1_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4K1_CHOCR)

HSP 1 Score: 343 bits (879), Expect = 4.340e-108
Identity = 191/435 (43.91%), Postives = 268/435 (61.61%), Query Frame = 0
Query:  227 DYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRMGAEM----------SPVVRKKQGYMSMSDSE--VEEHIVYTGNEDGIPMDR------LDDGPNSEEIESASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFLIQAPISRSRPLLPHEAAMAVLPKHAKHLLPVPLQRMYDNPAMLKKIFTGKDEVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNPRVKKPGQRFEEVRHRPVIYRVPFTMTTLPPCYEWPKGSIPSMLDLSYKTVRGSLLRAKNNVPAENN--GSASKLSERPQRRTHRGVRHIRPRTS 641
            DYIPK+RG+SL RTWRRY+SLKL   G    PF G  +VDAEKRT NW   +AL+D VGVPV  + +  + ++   ++          S V    Q  +++ +S    ++ IVYTGNEDG+PM+       LDD  ++E++        T+S++SG +  + E ++  D EQ HI+ L+A++G++TKFYDT R+ RALLW L MY+DG C DY FQY KPYGP  + + KYI+ H+GDPF+IQAP++ + PL P++AA A+LP+HA HLLP P+Q++  NPA+ K++F  KDEVN+ ++V  I  IP S +S  E  R   G P LLR P   D     N  V +PG +FE++R +PVIY      T  PPC+ WP GS P ML+L Y  V G  L+   + PAE+N  G A K++   +     G   +RPR +
Sbjct:    6 DYIPKIRGVSLGRTWRRYLSLKLSGDGNKEAPFKGQLIVDAEKRTFNWQFLHALIDKVGVPVRPVEQELRAQQSALDVAANTLSDVGSSHVASDGQSLIALDNSTEIADDRIVYTGNEDGVPMEDEVEWHGLDD--DNEDVLDPLIDCDTESDESG-ELTDDEIDEAVDAEQAHIENLVAITGNSTKFYDTERFFRALLWTLHMYIDGFCSDYTFQYAKPYGPSCDVLSKYIKDHNGDPFVIQAPVANTSPLRPYQAAAAMLPRHAVHLLPKPVQQVVQNPALSKRLFLPKDEVNIFALVQAIDEIPLSAYSETERQRLECGLPFLLRRPIRGDFCPRANAPVPRPGPKFEQIRAQPVIYYRNLRATDAPPCHAWPSGSTPGMLNLPYVQVGGLRLQRPRSNPAESNVAGPAPKVASSKKCAGQIGKGPVRPRNA 437          
BLAST of Gcaud8093.t1 vs. uniprot
Match: M1US37_CYAM1 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 303 bits (775), Expect = 9.300e-90
Identity = 222/672 (33.04%), Postives = 312/672 (46.43%), Query Frame = 0
Query:    1 MGIIGFQKWFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRK-YRNVDIRISGADVPGEGELKLVDYCRT-----------------------------------------------GTRGKRQNY---VISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVP-VPSIAEA--EQEKRMGAEMSPVVRKKQ-GYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIESASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFL-IQAPISRSRPLLPHEAAMAVLPKHAKHLLPVPL--------QRMYDNPAMLKKIFTGKDEV---------------NVASMVTEISRIPESEFSTEELLRTVFGSPILLRLP--------RLNDSVQYMNPRVKKPG-QRFEEVRHRPVIYRVP-FTMTTLPPCYEW 583
            MGI GFQ+W+L  FP  V    G    E +DHV FD+NQ++H   R A NR      +FR LD IL+ CVP+KSVF AFDGPAPLAKLVTQ+RR   ++ +            RK K  R  +D L ++PG E +     +VE++  SRLQ+ R  Y+NV   +SG  VPGEGE+K++DY                                                  GT  KRQ     VISVW+  R  +R FP E+ S+RLD V++ ++ GNDY+PK+RG S    W  Y +LKL     D  P  G  LV  E+R+ +W   YALM  +  P VP++ +   E  +         +R  Q G  S+  S   E       E  +    L+DG   +          TD ED      EK D          I   I++  D  K YDT  W+R LLW L MY+DG C D+Y  Y + YGP   +I+++++ +DGDP L +Q P+S + PL PH A +A++P  A  LLP P+        Q+  +N     ++ T  DE                N + ++  +  I + E+   E  RT   S +   L         R   S Q   P++ +P  QRF ++      + +    +T+ PPC  W
Sbjct:    1 MGIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRT--------RKRK-RRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKL-----DKGPMRGKYLVCREQRSFDWEFLYALMKRLINPLVPNLTKELIEMYREASIRGQEALRLAQAGNASVEASSSCESESKDSVERNVHPSDLEDGTEPDAAHGEISADVTDPED----ILEKVD----------IPEGISVDDDE-KLYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAARLLPQPIFKRVLLRSQQQAENSESAAEMGTNADETAKLITFILQDDGRRTNRSLLLRVVEGIRDDEYEEIEKHRTRLSSSVAFALRQGDMSGNGRTCASSQERAPKLPEPPVQRFAKLSLSGAEFSIEGVQLTSTPPCRSW 643          
BLAST of Gcaud8093.t1 vs. uniprot
Match: A0A7J7IHE6_9RHOD (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 302 bits (774), Expect = 1.330e-89
Identity = 218/684 (31.87%), Postives = 317/684 (46.35%), Query Frame = 0
Query:    1 MGIIGFQKWFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRK-YRNVDIRISGADVPGEGELKLVDY-------------------------------------------CRTGTRGKRQNY-------VISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVP-VPSIA--------EAEQEKRMGAEMSPVVRKKQGYMSMSD----SEVEEHIVYTGN-EDGIPMDRLDDGPNSEEIESASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTK-FYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPF-LIQAPISRSRPLLPHEAAMAVLPKHAKHLLPVPLQR---------------------MYDNPAMLKKIFTGKD--EVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNPRVK----------KPGQRFEEVRHRPVIYRVPFTM-TTLPPCYEW 583
            MGI GFQ+WFL TFP            E +DHV FD+NQ++H   R A NR      ++R LD++L+ CVP++SVF AFDGPAPLAKLVTQ+RR   +  +             +PK  R  +D L ++PG E +     ++E++  SRLQ+ R  YRN+   +SG  VPGEGE+K++DY                                            +  +RG  + +        ISVW+  R  +R+FP E++ VRLD  LL ++ GNDY+PK+RG S    W  Y +LK+  + G   P  G  L+  E+RT+N    YALM S+  P VP +         EA    +  A ++ +   + G     D    S+VE+ I+Y G+ E   P       P  +  +                          D+  E ++T   +S D  +  +DT  W+R LLW L MYVDG C D+YF Y KPYGP   +I+++++  DGDP   +Q P+S + PL PH A +A++P  A  LLP PL +                     M D  A L       D    N   ++  I +IPE+E+   E+ RT FGS +   L     + +  +P  K           P QRF ++    + + +     T+ PPCY W
Sbjct:    1 MGIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKL--------EPK-KRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEPHHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKM--RQG---PMSGRYLLCGEQRTINLEFLYALMSSLENPLVPQLTKQLVEMYREASIRGQEMARLAELESTRTGATETPDNDSISDVEQ-ILYNGDLEKPSPCKETTKEPVIDMTDP-------------------------DDMLEMVETPEGVSYDNDETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPSTAAKLLPRPLYKRVLLRARGSDENPENAGLSGMMSDETAKLITFILRDDGRRTNRTILLRVIEKIPENEYEDLEIPRTRFGSSVAFELTCRGANSRKSDPSTKYTASYETLPKPPVQRFAKLSPSWIDFFIQTVQFTSAPPCYSW 644          
BLAST of Gcaud8093.t1 vs. uniprot
Match: A0A7S1TFG2_9RHOD (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 299 bits (765), Expect = 1.150e-88
Identity = 206/654 (31.50%), Postives = 315/654 (48.17%), Query Frame = 0
Query:    9 WFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRT-------GTR-------------------------------------GKRQNYVISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRMGAEMSPVVRKKQGYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIESASEGSTTDSEDSGSDFAEKE-------DEDYFDEEQEHIQTLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDG----------------------DP-FLIQAPISRSRPLLPHEAAMAVLPKHAKHLLPVPLQRMYDNPAMLKKIFTGKDEVNVASMVTE-ISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNPRVKKPGQRFEEVRHRPVIYRVPFTMTTLPPCYEWPKGS 587
            W+   F  VVR+ +G       DHV FD+NQ++H  LR++ N + L   +FR +D  LK C+P++SV+FAFDGP P+AKL+TQR R                   ++   A   ID   +TPG E +Y ++D+++Y+A SRL+ D KY  VD+RISG DVPGEGE+K+ D+  +       GT+                                      + +  VIS+  L +  E  FP ES  VRLDF++L ++NGNDY+PKVRG+     W  Y+++K   KG +   F G  L+D+ +RT NWP   AL++++   V        EK +  E    + +++  +    +E+   I+YTG+                   +++  +  D +D   D A+         D+  +D E  + +T    S +  + +D   ++R +LWN+QMYVDG C DY + Y + Y P    I+ +++ HDG                      DP F IQ P+S  +PL PH+AA+A+LP  A HLLP P+Q +  +   L +       +   S V + +  IP S ++  EL RT FG+  L+R      +   + P    P  RF  +R    + R+  T TT PPC  W   S
Sbjct:    8 WYSVDF--VVRIGYG-----FLDHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANS------------QRKVLANRHIDPNAITPGTELMYMLQDALDYFACSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIK---KGRE--QFQGQYLLDSTRRTFNWPFLVALLETIRSVVIEPHVLLAEKSLQVEEPSRMNEEEHDVPPDPNEI---ILYTGDMTAS---------------ASTSAAIPDVDDDEEDHADXXXXXXSVGDDGEYDYESAYDETNTGESPN--RLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLPSSASHLLPGPIQELGASCTALDRARRDSMYLRELSKVLDAVDSIPRSLYTRAELRRTRFGNVHLIRKTSRPRAASQLPP---PPVARFRSLRVPSHLNRMLVTTTTAPPCLRWTSAS 614          
BLAST of Gcaud8093.t1 vs. uniprot
Match: A0A7S2ZT58_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT58_9RHOD)

HSP 1 Score: 199 bits (505), Expect = 1.780e-52
Identity = 165/583 (28.30%), Postives = 255/583 (43.74%), Query Frame = 0
Query:    1 MGIIGFQKWFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDA-LEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRTGTRGKRQNYVI-----------------SVWELARTFERIFPNESSSVRL---------------DFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRMGAEMSPVVRKKQGYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIESASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFLIQAPISRSRPLLPHEAAMAV-LPKHAKHLLPVPLQRMYDNPAMLKKIFTGKDEVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNP 549
            MGI GFQKW   TFPE V        G+ +D+V  D+N +LH V  R+ + Q L   +F ELD++LK C P K+V  A DGPAPLAK+ T R+R      +YVS         RK        D  LE TPG   ++ + +S+EY+   RL N  K+  +D   SG++V GEGE+K++DY       K +N  +                  ++     F    P    SVRL               DFVLL +L+GNDY+PK+RG +L++  ++Y  ++  +K          S++      +NW  F  ++D             +  RM A+M+   R      +   ++          EDG  +D +DD                                      + ++    L+GD    YD   +++ LLWN+QMY+DG   D  F Y   Y PP++ +L +  +  G    +  P+S +RP +  + A+ + LP  A  L P  LQ +  + A +       D V V   V EI   P S ++ EE  RT+  + ++ R  + ++   +  P
Sbjct:    1 MGISGFQKWIRTTFPEAVD-DVPESAGDRFDYVCIDVNHVLHSVANRSPDHQLLPLLLFAELDRLLKACQPLKAVVLAMDGPAPLAKVATARKRRE----QYVS---------RKQYNNASGHDYYLEFTPGTAMMHQLGNSIEYFICQRLLNGSKFGKIDFVFSGSNVHGEGEIKILDYLNLCVAPKNENSSVVIIGGDSDIILQALCTPQIYNFFVYFRSGGPTSCVSVRLLGSLIDEVLGDNQRLDFVLLCLLSGNDYLPKLRGYNLSKAMKKYSRIRRRTK---------QSVIGGPPLGINWETFCQVID-------------KHNRM-AKMAKASRSSSSVNAFPSAQ---------EEDGEDLDGVDD--------------------------------------DELEDDAVLTGD----YDVETYIKGLLWNMQMYIDGYPPDQLFYYRFKYAPPVDAVLDFF-LEKGMYTQVDLPVS-NRPAITSQLALTLMLPSAAWSLAPGRLQPLVKSGASIS------DFVEVRKRVQEI---PFSTYTGEE--RTMLRTGVVWRYRKGSEPEPFTRP 482          
BLAST of Gcaud8093.t1 vs. uniprot
Match: A0A6H5KZW9_9PHAE (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 3.030e-48
Identity = 165/568 (29.05%), Postives = 259/568 (45.60%), Query Frame = 0
Query:    2 GIIGFQKWFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQR--RRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRTGTRGKRQNYVI---------------------------------SVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSI-AEAEQEKRMGAEMSPVVRK------------KQGYMSMSDSEVEEHIV---YTGNEDGIPMDR--------------LDDGPNSEEIESASEGSTTDS-EDSGSDFAEKE-----DEDYFDEEQEHIQTLI-----ALSG-------DTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFL-IQAPISRSRPLLPHEAAMAVLPK--HAKHLLPVPLQ 483
            GI GF KWF+  FP  V         E +DHV  D+NQILH  +R+A +       IFR+++  LK C PRKSV FAFDG APLAKL+ QR  R   K+ ++Y                    + AL ++PG + +  V  ++EY+A+        Y+ V   ISGA+VPGEGELK +D+ +   +      ++                                 S+WE+ R+ E +FP +S+ VR+D  +L +LNGNDY+PKVRG+S +R ++ Y +LK   +G     F    L+D +K+++ W     L D +   +PSI AEAE    +  E   +  +            +QG +     E+E H +    +G+  G    +              L  G     +  A+E    +   D   +F E+E     ++   D+E E I + +     A +G         T  +D   ++  +LWNLQMY+DG   ++Y++Y   Y P   +I+ ++++   D    +  P+  + PL    A + +LP     K  LP  LQ
Sbjct:   21 GINGFHKWFVQEFPTAVT---DASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKY-------------------RMSALHLSPGTKFMDDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK---RGKHRDNF----LIDGDKKSICWEF---LQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLG-DGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQ 554          
BLAST of Gcaud8093.t1 vs. uniprot
Match: A0A7S2ZT80_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT80_9RHOD)

HSP 1 Score: 164 bits (415), Expect = 6.440e-40
Identity = 156/586 (26.62%), Postives = 248/586 (42.32%), Query Frame = 0
Query:    1 MGIIGFQKWFLGTFPEVVRVQHGPKFGE-VYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRTGTRGKRQN-----------------------------------YVISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRMGAEMSPVVRKKQGYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIESASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFLIQAPISRSRPLLPHEAAMAV-LPKHAKHLLPVPLQRMYDNPAMLKKIFTGKDEVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNP 549
            MGI GFQKW   TFP+ V  Q+ PK  +  +D+V  D+N ++H V R +  R+ L   +  EL++IL  C PR++VF A DGP PLAK+ T R    K  ++   D       L            LE TPG   ++ + + +E++   +LQ   K R +    S ++VPGEGE+K+ D+        R+N                                   + +SV  L    +++        RLDFVLL +L+GNDY+PK+RG + +    +Y  ++  +K          S++      +NW  F  ++D     V  +A A +       +SP V+    +     S  EEH         I +                +G   D                       +Q    L+GD    YD   +++ LLWN+QMY+DG   D  F Y   Y PP++ +L +  +  G    +  P+S +RP +  + A+ + LP  A  L P  LQ +  + A +       D V V   V EI   P S ++ EE  RT+  + ++ R  + ++   +  P
Sbjct:    1 MGIRGFQKWIRRTFPDAV--QYVPKNSQDFFDYVCIDMNLVIHNVARSSPGRRQLCDLLSDELNRILNVCKPRRAVFLAMDGPPPLAKVATVREWREKYFSKNQYDSASGGDYL------------LEFTPGTALMHELANEIEWFICQKLQKF-KSRKIQFIFSSSNVPGEGEVKIQDFLNQCVAPNRKNPSVVVIGGDSDSILMGLCKPQIYNLFVFLRSGHAGHCVSVGLLGSRIDQLLGENQ---RLDFVLLCLLSGNDYLPKLRGYNFSEAIGKYRQIRNRTK---------KSVIGGPPLGINWETFCQIIDKHDFLV-RMARASR-------LSPSVKAHTSW-----SPHEEHF------QDIRVXXXXXXXXXXXXXXXVDGLHEDG----------------------VQDDAVLTGD----YDVETYIKGLLWNMQMYIDGYPPDQLFYYRFKYAPPVDAVLDFF-LEKGMYTQVDLPVS-NRPAITSQLALTLMLPSAAWSLAPGRLQPLVKSGASIS------DFVEVRKRVQEI---PFSTYTGEE--RTMLRTGVVWRYRKGSEPEPFTRP 501          
BLAST of Gcaud8093.t1 vs. uniprot
Match: L1I795_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I795_GUITC)

HSP 1 Score: 161 bits (408), Expect = 1.770e-38
Identity = 153/600 (25.50%), Postives = 252/600 (42.00%), Query Frame = 0
Query:    7 QKWFLGTFPE-VVRVQ-HGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRT------------------------GTRGKRQN----YVISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLVSKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRMGAEMSPVVRKKQGYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIESASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQ-TLIALSGDTTKFYDTCRWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFLIQAPISRSRPLLPHEAAMAVLPKHAKHLLPVPLQR-MYDNPAMLKKIFTGKD-----EVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNPRVKKPGQRFEEVRHRPVIYR 569
            ++W   +FP+ V+ +    P F   +DHV FD+N +LH   R   N   +   +FR++D  L+   P KSV   FDGP P+AK+  Q     K+T                 K A   +D++++TPG   +  VR+         L+    YR++   +S +DV GEGELKLV++  T                          RG  Q     + IS+ EL +  E IFP+ S  +R D +LL I NGNDY+P ++  +L  ++  Y  +K   K      F    L+D  ++T ++                   AE  K++ A      R K   +S    E+ +++     E  +   + +      E  SAS               +K  +D+ D    H + T I    +  +  +  R+++ +LWN++MY+DG   D+ F Y    GP    ++ +I      P L +A  S SRPL P E  +AV P  A   LP+  +  + D      + F  KD      + +  +  E++RI  +  + EE       S   L     N  ++    +    G++  E  +RP+ ++
Sbjct:   23 KRWLEASFPKCVIPISPRSPSFK--FDHVLFDMNDMLHTCARNCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQVESREKRT-----------------KVASSTLDSIDITPGTRFMSEVRELCFAHVVQSLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKDRILFIGGDSDLTIQSLALRGHSQRIKPMHFISLSELKKELETIFPDHSDIIRFDLLLLIIFNGNDYLPPLKHFNLQVSFEVYTLMKSQEK------FRSRFLLDGREKTFDYEFL----------------AEFLKQVDA------RLKTWKISNPIVELHQYVQEGSLEYSVEDLQFEFSQEIREEHSAS--------------IDKHQKDFVDLLTNHRKGTSIPKRYEPPEMIE--RYLKGVLWNIKMYIDGFVPDFEFMYSFKKGPSSSSVVNWIE-SKVKPSL-KAESSNSRPLAPAELCLAVTPVRAADRLPLQYRNILLDETCQFHRHFKAKDALFQPHLFLPLLRKELTRIDPNLMTDEEKFIVAMNSAWTLLFHVRNRHMESYLQQGFWEGRKNTEWSNRPLPFQ 557          
BLAST of Gcaud8093.t1 vs. uniprot
Match: L1JQ07_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 144 bits (364), Expect = 1.210e-35
Identity = 84/260 (32.31%), Postives = 129/260 (49.62%), Query Frame = 0
Query:   37 INQILHQVLRRATNRQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRXXKKTTEYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVDIRISGADVPGEGELKLVDYCRT-----------------------------------------------GTRGKRQ-NYVISVWELARTFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLK 248
            +N +LH   R+A + +     +++ELD  L+  +P KSV  AFDGP PLAKL+TQR+R  K +                 K ++  +  L +TPG + +  +R++ EY+A  RL    K++NV   ISGADV GEGE+K++++                                                    +GK   + V+S+WE+ R+ ER+FP +S +VR D ++L I+NGNDY+PKVRG S    +R Y  +K
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSS-----------------KASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243          
The following BLAST results are available for this feature:
BLAST of Gcaud8093.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5K0_9FLOR0.000e+065.805'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
R7Q4K1_CHOCR4.340e-10843.91Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1US37_CYAM19.300e-9033.04XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7J7IHE6_9RHOD1.330e-8931.87XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
A0A7S1TFG2_9RHOD1.150e-8831.50Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
A0A7S2ZT58_9RHOD1.780e-5228.30Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A6H5KZW9_9PHAE3.030e-4829.05XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2ZT80_9RHOD6.440e-4026.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
L1I795_GUITC1.770e-3825.50Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
L1JQ07_GUITC1.210e-3532.31Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 1..185
e-value: 3.0E-31
score: 108.7
NoneNo IPR availableGENE3D3.40.50.12390coord: 1..107
e-value: 6.7E-18
score: 67.1
coord: 124..196
e-value: 1.8E-7
score: 32.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 608..622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 607..653
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 639..653
NoneNo IPR availableCDDcd09897H3TH_FEN1-XPG-likecoord: 217..256
e-value: 0.00269764
score: 34.8806
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 1..183
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 211..616
IPR0164945'-3' exoribonuclease 1PANTHERPTHR12341:SF75'-3' EXORIBONUCLEASE 1coord: 211..616
IPR0164945'-3' exoribonuclease 1PANTHERPTHR12341:SF75'-3' EXORIBONUCLEASE 1coord: 1..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_211_length_36859_cov_4.689676contigNODE_211_length_36859_cov_4.689676:16756..19016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8093.t1Gcaud8093.t1Gracilaria caudata M_176_S67 malemRNANODE_211_length_36859_cov_4.689676 16756..19016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8093.t1 ID=Gcaud8093.t1|Name=Gcaud8093.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=654bp
MGIIGFQKWFLGTFPEVVRVQHGPKFGEVYDHVAFDINQILHQVLRRATN
RQTLAAAIFRELDQILKNCVPRKSVFFAFDGPAPLAKLVTQRRRRRKKTT
EYVSDYVDENGVLRKPKFARPAIDALEMTPGVETLYFVRDSVEYWAYSRL
QNDRKYRNVDIRISGADVPGEGELKLVDYCRTGTRGKRQNYVISVWELAR
TFERIFPNESSSVRLDFVLLAILNGNDYIPKVRGISLTRTWRRYVSLKLV
SKGGDLPPFHGHSLVDAEKRTLNWPMFYALMDSVGVPVPSIAEAEQEKRM
GAEMSPVVRKKQGYMSMSDSEVEEHIVYTGNEDGIPMDRLDDGPNSEEIE
SASEGSTTDSEDSGSDFAEKEDEDYFDEEQEHIQTLIALSGDTTKFYDTC
RWVRALLWNLQMYVDGNCGDYYFQYGKPYGPPIEEILKYIRIHDGDPFLI
QAPISRSRPLLPHEAAMAVLPKHAKHLLPVPLQRMYDNPAMLKKIFTGKD
EVNVASMVTEISRIPESEFSTEELLRTVFGSPILLRLPRLNDSVQYMNPR
VKKPGQRFEEVRHRPVIYRVPFTMTTLPPCYEWPKGSIPSMLDLSYKTVR
GSLLRAKNNVPAENNGSASKLSERPQRRTHRGVRHIRPRTSPSRRDYPTK
PHS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0270735_3_exoribonuclease
IPR0164945_3_exoribonuclease_1