Gcaud2189.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2189.t1
Unique NameGcaud2189.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length151
Homology
BLAST of Gcaud2189.t1 vs. uniprot
Match: A0A2V3J309_9FLOR (Ubiquitin-conjugating enzyme E2 N n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A2V3J309_9FLOR)

HSP 1 Score: 290 bits (741), Expect = 5.460e-99
Identity = 142/150 (94.67%), Postives = 145/150 (96.67%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME 150
            MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYA GRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNN+AAELWK NE  AMQTARDWTKQ+A +
Sbjct:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYATGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNEAAELWKNNEPRAMQTARDWTKQYAQQ 150          
BLAST of Gcaud2189.t1 vs. uniprot
Match: A0A1X6PB77_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PB77_PORUM)

HSP 1 Score: 250 bits (639), Expect = 2.640e-83
Identity = 115/148 (77.70%), Postives = 134/148 (90.54%), Query Frame = 0
Query:    3 SLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME 150
            +LPKRI+KETERL S+PVPGI+AVP D NAR FSVVI+GP++SPYA G F+LELFLP+DYPMAPPKVRFLTR+YHPNIDRLGRICLD++K  WSPALQIRTVLLSIQALL+APNPDDPLNN+AA+LWK +E  A+  ARDWT+QHA +
Sbjct:    8 ALPKRILKETERLLSDPVPGINAVPHDDNARYFSVVILGPQDSPYAGGTFRLELFLPDDYPMAPPKVRFLTRLYHPNIDRLGRICLDVIKKMWSPALQIRTVLLSIQALLAAPNPDDPLNNEAADLWKRDEAAALAKARDWTRQHASD 155          
BLAST of Gcaud2189.t1 vs. uniprot
Match: UPI001E1D510E (ubiquitin-conjugating enzyme E2 N n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D510E)

HSP 1 Score: 249 bits (637), Expect = 3.930e-83
Identity = 116/148 (78.38%), Postives = 132/148 (89.19%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHA 148
            MA LP+RI+KET+RL  EPVPGI AVP ++NAR F VV+ GPE SPY  G FKLELFLPE+YPM+ PKVRF+T+IYHPNID+LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNN+ AE WKTNEVLA+QTA++WT+ HA
Sbjct:    1 MAGLPRRIIKETQRLMQEPVPGIQAVPDEANARYFKVVVAGPEGSPYEHGTFKLELFLPEEYPMSAPKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNEVAEQWKTNEVLAIQTAKEWTRHHA 148          
BLAST of Gcaud2189.t1 vs. uniprot
Match: C1BTV9_LEPSM (UBE2N n=14 Tax=Bilateria TaxID=33213 RepID=C1BTV9_LEPSM)

HSP 1 Score: 249 bits (637), Expect = 4.060e-83
Identity = 117/150 (78.00%), Postives = 133/150 (88.67%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME 150
            MA LP+RI+KET+RL  EPVPGISA+P + NAR F VV+ GPEESP+  G FKLELFLPEDYPM+ PKVRF+T+IYHPNID+LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL ND AELWK NEV A++ ARDWT+++AME
Sbjct:    1 MAGLPRRIVKETQRLMKEPVPGISAIPDEGNARYFHVVVAGPEESPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKENEVEAIRNARDWTRKYAME 150          
BLAST of Gcaud2189.t1 vs. uniprot
Match: A0A6T6KX91_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6KX91_9RHOD)

HSP 1 Score: 249 bits (635), Expect = 7.170e-83
Identity = 117/145 (80.69%), Postives = 130/145 (89.66%), Query Frame = 0
Query:    4 LPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHA 148
            LPKRI+KETE+L++EPVPGISAVP DSN R F+V+I GPEESPY  G FKLELFLPE+YPM PPK+RFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQ LLS+PNPDDPLNN+AAELW  NE  A+QTA DWT+ +A
Sbjct:    2 LPKRIIKETEKLEAEPVPGISAVPHDSNPRYFNVIIQGPEESPYGGGTFKLELFLPENYPMGPPKIRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQVLLSSPNPDDPLNNEAAELWLKNEATALQTAMDWTQLYA 146          
BLAST of Gcaud2189.t1 vs. uniprot
Match: A0A5J4Z487_PORPP (Ubiquitin-conjugating enzyme E2 N n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z487_PORPP)

HSP 1 Score: 249 bits (635), Expect = 1.000e-82
Identity = 120/150 (80.00%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME 150
            MA LPKRI KETERLQ+EP PGISAVP D+N R F+V+I GP ESPY+ G FKLELFLPEDYPM PPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNN+AA+ WK +E  A+QTA+ WT  +A E
Sbjct:    8 MAGLPKRIQKETERLQAEPAPGISAVPHDNNPRHFNVIINGPNESPYSGGIFKLELFLPEDYPMGPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNEAADRWKKDEQQAIQTAKTWTATYARE 157          
BLAST of Gcaud2189.t1 vs. uniprot
Match: UPI0014031305 (ubiquitin-conjugating enzyme E2 N-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014031305)

HSP 1 Score: 248 bits (633), Expect = 1.710e-82
Identity = 117/148 (79.05%), Postives = 130/148 (87.84%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHA 148
            MA LPKRI+KET+RL +EPVPGISA P +SNAR F V+IIGP +SP+  G FKLELFLPEDYPMAPPKVRF+T+IYHPN+D+LGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL ND AELWK NE  A++ AR WTK HA
Sbjct:    1 MAELPKRIIKETQRLMTEPVPGISAEPDESNARHFHVIIIGPPDSPFEGGTFKLELFLPEDYPMAPPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAQALEKARAWTKLHA 148          
BLAST of Gcaud2189.t1 vs. uniprot
Match: D6W8B6_TRICA (Ubiquitin-conjugating enzyme E2 N-like Protein n=173 Tax=Pancrustacea TaxID=197562 RepID=D6W8B6_TRICA)

HSP 1 Score: 248 bits (632), Expect = 2.350e-82
Identity = 115/150 (76.67%), Postives = 134/150 (89.33%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME 150
            MA+LP+RI+KET+RL  EPVPGISAVP DSNAR F V++ GPE+SP+  G FKLELFLPEDYPM+ PKVRF+T+IYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL ND AELWK NE  A++ A++WT+++AM+
Sbjct:    1 MAALPRRIIKETQRLMQEPVPGISAVPDDSNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYAMD 150          
BLAST of Gcaud2189.t1 vs. uniprot
Match: A0A1B0DKC3_PHLPP (UBC core domain-containing protein n=10 Tax=Endopterygota TaxID=33392 RepID=A0A1B0DKC3_PHLPP)

HSP 1 Score: 246 bits (627), Expect = 1.360e-81
Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME 150
            MA LP+RI+KET+RL  EPVPGISAVP +SNAR F V++ GPE+SP+  G FKLELFLPEDYPM+ PKVRF+T+IYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL ND AELWK NE  A++ AR+WT+++AM+
Sbjct:    1 MAVLPRRIIKETQRLLQEPVPGISAVPDESNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQRYAMD 150          
BLAST of Gcaud2189.t1 vs. uniprot
Match: A0A1B0DAL7_PHLPP (Bendless n=3 Tax=Phlebotominae TaxID=7198 RepID=A0A1B0DAL7_PHLPP)

HSP 1 Score: 245 bits (625), Expect = 2.650e-81
Identity = 113/148 (76.35%), Postives = 132/148 (89.19%), Query Frame = 0
Query:    1 MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAGRFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHA 148
            M +LP+RI+KET+RL  EPVPGISA+P ++NAR F VV+ GP++SP+  G FKLELFLPE+YP++ PKVRF+TRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL ND AELWK NEV A+Q ARDWT+++A
Sbjct:    1 MENLPRRIIKETQRLMQEPVPGISAIPDETNARYFHVVVAGPKDSPFEGGNFKLELFLPEEYPLSAPKVRFITRIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKMNEVAAIQNARDWTRKYA 148          
The following BLAST results are available for this feature:
BLAST of Gcaud2189.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J309_9FLOR5.460e-9994.67Ubiquitin-conjugating enzyme E2 N n=2 Tax=Rhodymen... [more]
A0A1X6PB77_PORUM2.640e-8377.70UBC core domain-containing protein n=1 Tax=Porphyr... [more]
UPI001E1D510E3.930e-8378.38ubiquitin-conjugating enzyme E2 N n=1 Tax=Mercenar... [more]
C1BTV9_LEPSM4.060e-8378.00UBE2N n=14 Tax=Bilateria TaxID=33213 RepID=C1BTV9_... [more]
A0A6T6KX91_9RHOD7.170e-8380.69Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z487_PORPP1.000e-8280.00Ubiquitin-conjugating enzyme E2 N n=1 Tax=Porphyri... [more]
UPI00140313051.710e-8279.05ubiquitin-conjugating enzyme E2 N-like n=1 Tax=Pet... [more]
D6W8B6_TRICA2.350e-8276.67Ubiquitin-conjugating enzyme E2 N-like Protein n=1... [more]
A0A1B0DKC3_PHLPP1.360e-8176.67UBC core domain-containing protein n=10 Tax=Endopt... [more]
A0A1B0DAL7_PHLPP2.650e-8176.35Bendless n=3 Tax=Phlebotominae TaxID=7198 RepID=A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..149
e-value: 3.0E-70
score: 249.4
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..147
NoneNo IPR availablePANTHERPTHR24068:SF263UBIQUITIN-CONJUGATING ENZYME E2 36-LIKE ISOFORM X1coord: 3..147
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 7..142
e-value: 2.1E-48
score: 163.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 3..149
score: 57.566544
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 5..144
e-value: 3.22455E-66
score: 195.884
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..150
e-value: 2.7E-65
score: 220.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 5..149
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 76..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:28259..28819 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2189.t1Gcaud2189.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 28259..28819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2189.t1 ID=Gcaud2189.t1|Name=Gcaud2189.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=151bp
MASLPKRIMKETERLQSEPVPGISAVPSDSNARLFSVVIIGPEESPYAAG
RFKLELFLPEDYPMAPPKVRFLTRIYHPNIDRLGRICLDILKDKWSPALQ
IRTVLLSIQALLSAPNPDDPLNNDAAELWKTNEVLAMQTARDWTKQHAME
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS