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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 136037.KDR23112 |
| Preferred name | MED13L |
| PFAMs | Med13_C,Med13_N |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K15164 |
| KEGG Pathway | ko04919,map04919 |
| GOs | GO:0000428,GO:0001654,GO:0001667,GO:0001755,GO:0002009,GO:0002164,GO:0002165,GO:0003002,GO:0003674,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0006928,GO:0007154,GO:0007165,GO:0007275,GO:0007389,GO:0007423,GO:0007444,GO:0007447,GO:0007450,GO:0007478,GO:0007480,GO:0007525,GO:0007526,GO:0007552,GO:0007560,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010469,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0014031,GO:0014032,GO:0014033,GO:0014070,GO:0016070,GO:0016477,GO:0016591,GO:0016592,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022416,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030111,GO:0030154,GO:0030177,GO:0030374,GO:0030518,GO:0030521,GO:0030522,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032870,GO:0032991,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035218,GO:0035220,GO:0035222,GO:0035239,GO:0035257,GO:0035282,GO:0035285,GO:0035295,GO:0036011,GO:0038023,GO:0040011,GO:0042221,GO:0042592,GO:0042632,GO:0042809,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043433,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045165,GO:0045498,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046966,GO:0048190,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048762,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0048870,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051090,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051427,GO:0051674,GO:0051716,GO:0055029,GO:0055088,GO:0055090,GO:0055092,GO:0060089,GO:0060255,GO:0060429,GO:0060485,GO:0060562,GO:0060828,GO:0061061,GO:0061695,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070328,GO:0070847,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0080090,GO:0090263,GO:0090304,GO:0090575,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1904167,GO:1904168,GO:1990234,GO:2000112,GO:2000272,GO:2001141 |
| Evalue | 2.1e-11 |
| EggNOG OGs | KOG3600@1|root,KOG3600@2759|Eukaryota,38B95@33154|Opisthokonta,3BGDF@33208|Metazoa,3CRF7@33213|Bilateria,41W4M@6656|Arthropoda,3SHCU@50557|Insecta |
| Description | Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors |
| COG category | K |
| BRITE | ko00000,ko00001,ko03021 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud3580.t1.start1 | Gcaud3580.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_1059_length_14467_cov_3.827977 97..99 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud3580.t1.stop1 | Gcaud3580.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_1059_length_14467_cov_3.827977 5095..5097 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud3580.t1 ID=Gcaud3580.t1|Name=Gcaud3580.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1667bp MQPPPTFKPPVSVSVLALQNLSTVPFIRLALRSNPLTNLASPVARRAKWL EHGVGPQTAFPAVALALLAEQLPAALASLVRPSPPKPSPKPSRNPLTTGS LWVFGATPTLESAKSLLSDVFLVEEQGMWTAASSPVHTHAFTTAIHRAIV LALQSQGALRVANQVVHPSVGLSYTFSVSLSAPPESRIIIRVAVKNSKAR KIADHDLLRDSKSPLNVVTAPLGTPAVLSPRAPAGDALTESVLNRWREAG MYPCGPSSSADLDTSVVFVKFENGLEAPFPRAVVLTNEPLAPPEPIRSTD ISRASLHVKKSAKASNLWKSRKRPRSPSPCSPPAGNTGVAPSVPSEPPPS CEEPSEPYVDDAPTAQTINAAIRSLQQNGNKDSIPVLQHPLVEPVFAPVL GSSDPTKSPLQSSLKGDPTIAQGGSATGDVGLSVAQEQKSEPVPVSEQNV KTEPSTFAINAGNGLDSFPLDGDVSTSQDFLHGGAGIGMTDFSTLDEVAE FFRDGVDERLQEEQNNPVANDNSAHPRPENTQGLTEHNLNVADAMQQVSK PEGQTARMDVDSVPIDSSVTRMGVSDGLSVSDDKLKSMSPTDLVRAALRS FRSPMVPDKPSNSGVKEKLSAFFEDDFTERRRARLCTSQRITKARRLSKL YNPQSRFRLLKTSQDDDSKGFLKSDEGISNEGEGISNRKTLYIPRKKLKA FSRLRQLGEVKDLSLLRTESTWEFSESDDESEPKAHESPKTSFSSATLLS LNDLDRSSQKGDHQATIGERNSETDALKLADSVAIDCASACYVLSAERTP QPGFPSALAENAFSPSPSHGVREEDQKPAATVQISHNANKRFLPHPSTKT HMPPISGSPCGRSSTKRDGDMYNLMSLLEMQLFSMNELSLFRGNMNDFTD CKQRASTEMETDMVSSATMRRVLLGLPRALETSQVFKTCLESLGCGPKLS ENNAREFCIPDTETKTDSPEQNVPSVLGPLTINEYMGRSAAVFPLNPPKV CVGYDKEWMETFGGAIPTWEKAGLEPYSERKNVEYVAIAPEDIQEDVNVF LRDVSSAYEECSFGTHSLFPFERVAFISNSMVESTSSDSGNGAGLSEVER AMTEQYQLYVKALGTKLASLTRDSRRNPISAPTNIVAYVISPFEKKRTAA NVALMRAVSPLVNAVPDAIPSGMGATPPIPNLPAAPWRASSSKGIVSLTV RILPREVVDRNLSGSAETDRMSDRSLRPQLMKAVSFAVFNSIRTKRVRIP SIDSEVASVLSRASLMPDDLMSPMTPDIVAESPGGASITPVSPLGANTED GVSHTTQVAAQGLHVGHVDQSCALSPSFLYEPAIVLAGVGKHMGQTNSRA DIVLHLAYTFCDATSRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFW GMWARGQRWRISYVDEVHATVSRLGQMTPGELEDWDWVIGKVMSSKSSLS EKSSDEDNVSVVRRFPPLQQQKPDDVNDVYTEFSTPATPGVSQPTSSGAA SKGAPSIDVKMPPVCSVSVVSVCNLETHLFLEESMDLNADRRDFAIVGKE RLSRGKNVQATAVLVRYESEGMKALEVNVLRHYGSAGHSEEMSDERSPWD SLDVQTIAHTIASNFHELRYTTSPPCWPAQKWLSMYPVHMDAIRGYQANL RLLHRHGLGAQSASSR* back to topspliced messenger RNA >Gcaud3580.t1 ID=Gcaud3580.t1|Name=Gcaud3580.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5001bp|location=Sequence derived from alignment at NODE_1059_length_14467_cov_3.827977:97..5097+ (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGCCCCCTCCAACCTTCAAGCCCCCCGTCAGTGTCTCCGTGCTTGC CCTTCAGAACCTCTCCACAGTCCCGTTCATCCGCCTCGCGCTTCGCTCCA ACCCACTGACAAACCTCGCTTCGCCTGTCGCCCGCCGCGCGAAGTGGCTG GAACATGGAGTGGGCCCTCAAACCGCTTTCCCCGCCGTCGCACTTGCGCT TCTTGCCGAGCAGCTTCCCGCCGCGCTTGCCTCCCTTGTACGCCCGTCCC CGCCAAAGCCATCGCCAAAGCCTTCTCGCAATCCTCTGACGACCGGCTCG TTGTGGGTGTTTGGAGCCACTCCAACATTAGAATCCGCCAAAAGCTTGCT CTCAGATGTCTTCCTTGTGGAAGAACAAGGAATGTGGACCGCCGCCTCAT CTCCGGTTCATACCCACGCGTTCACCACCGCCATTCACCGCGCCATCGTG CTAGCCCTTCAATCGCAAGGCGCACTCCGCGTTGCTAATCAGGTCGTACA CCCTTCGGTTGGCCTCTCCTATACCTTCTCTGTATCGCTCTCTGCCCCAC CCGAATCTCGCATTATCATTCGAGTCGCTGTCAAGAATTCAAAGGCGCGC AAAATCGCCGACCATGACCTGCTGCGCGACTCTAAGAGCCCCTTAAACGT TGTAACTGCACCCCTTGGCACCCCAGCCGTGTTGTCTCCTCGTGCGCCGG CTGGTGATGCTTTGACAGAGTCTGTTCTCAACAGATGGCGGGAGGCTGGC ATGTATCCTTGTGGACCATCCTCTTCAGCGGACTTGGACACTTCAGTGGT GTTTGTCAAGTTCGAAAATGGATTAGAAGCTCCCTTTCCAAGAGCTGTAG TTCTTACCAACGAGCCGCTGGCACCTCCTGAGCCAATTAGGTCCACGGAC ATATCTCGAGCTTCTCTTCATGTCAAGAAGAGTGCCAAAGCTTCGAACTT GTGGAAGTCGAGAAAGCGGCCCAGGTCTCCTTCCCCGTGTAGCCCTCCTG CTGGCAATACTGGTGTTGCTCCCTCAGTACCTTCGGAACCCCCGCCGTCT TGTGAGGAGCCTTCTGAGCCATACGTCGATGATGCTCCGACTGCACAGAC AATCAATGCTGCAATTCGATCCCTTCAGCAAAATGGAAACAAAGACTCTA TTCCCGTTTTGCAACATCCACTCGTTGAACCGGTTTTTGCGCCTGTACTG GGCAGTTCTGACCCTACCAAGTCGCCCTTGCAAAGCTCATTGAAAGGGGA TCCAACCATTGCACAAGGTGGAAGTGCGACAGGAGACGTTGGCCTGAGTG TTGCTCAGGAGCAGAAGAGTGAGCCAGTTCCCGTCTCGGAACAGAACGTG AAGACTGAGCCTTCAACATTTGCTATTAACGCCGGCAATGGACTGGACTC TTTCCCACTGGATGGCGATGTTTCCACCTCACAAGATTTCCTGCACGGTG GGGCTGGGATAGGCATGACAGACTTCAGTACTCTAGACGAAGTTGCTGAA TTCTTCCGAGACGGTGTAGACGAACGCCTTCAGGAAGAACAGAATAACCC TGTTGCAAACGACAATTCGGCTCATCCTCGCCCTGAAAATACACAAGGAT TGACCGAACATAACTTGAACGTTGCAGATGCAATGCAGCAGGTTAGTAAA CCTGAGGGGCAGACTGCAAGAATGGATGTAGATTCAGTGCCCATTGATTC ATCTGTCACACGCATGGGCGTTAGCGATGGTCTATCTGTGTCAGATGACA AATTGAAATCAATGTCACCCACTGATCTTGTGCGCGCAGCTTTGAGAAGC TTTCGTTCTCCTATGGTTCCAGACAAACCATCGAATTCGGGTGTCAAGGA AAAGCTCAGTGCGTTTTTCGAGGACGATTTCACTGAACGTCGTCGTGCAA GGCTGTGTACCTCTCAGCGAATCACTAAAGCCAGGAGACTGTCAAAGCTA TACAACCCGCAATCGAGGTTTCGTCTCCTGAAGACGTCTCAGGACGATGA CTCTAAAGGATTTCTAAAAAGTGATGAGGGCATTAGCAATGAAGGCGAGG GCATAAGCAACCGTAAGACTTTGTATATACCTCGGAAAAAGCTGAAAGCT TTCTCTAGACTCCGTCAGCTAGGAGAAGTCAAAGACCTGTCGCTGCTAAG AACAGAATCAACATGGGAATTCTCAGAATCAGATGACGAATCCGAACCTA AGGCCCACGAATCGCCAAAGACATCGTTTTCGTCTGCAACTTTGCTGTCC TTAAACGACCTTGATCGCTCTAGTCAAAAAGGCGACCATCAAGCCACGAT CGGGGAACGCAATTCTGAGACCGATGCGTTGAAACTGGCAGACTCGGTTG CCATTGACTGTGCAAGCGCGTGTTACGTGTTATCTGCAGAACGCACCCCA CAACCTGGGTTTCCGTCGGCCCTCGCCGAGAACGCTTTCTCGCCGAGCCC TTCGCATGGAGTCCGGGAGGAGGATCAGAAGCCTGCAGCTACAGTTCAAA TATCTCACAATGCGAACAAAAGGTTCCTACCGCATCCGTCGACTAAGACA CATATGCCTCCAATATCAGGTTCCCCTTGTGGAAGGTCTTCGACAAAGAG AGATGGAGACATGTACAATCTTATGTCCCTACTTGAAATGCAACTGTTCT CAATGAATGAACTCTCCTTGTTTCGAGGAAATATGAATGATTTTACAGAT TGTAAGCAAAGGGCATCTACGGAGATGGAGACAGATATGGTTTCTTCAGC TACAATGCGGCGAGTACTCTTGGGGCTGCCACGAGCTTTGGAAACAAGTC AGGTATTCAAAACATGCTTGGAGTCTCTTGGGTGCGGTCCCAAGTTATCG GAGAACAACGCTCGAGAGTTTTGCATACCGGATACCGAGACCAAAACTGA TAGCCCGGAACAAAACGTGCCCAGTGTGCTAGGTCCGCTTACTATCAATG AGTACATGGGACGATCTGCGGCCGTGTTTCCTCTAAACCCTCCAAAAGTG TGTGTCGGCTATGATAAGGAATGGATGGAGACTTTTGGTGGGGCTATCCC GACTTGGGAGAAAGCTGGGCTTGAGCCGTATAGTGAGCGGAAGAATGTGG AATACGTTGCGATTGCACCGGAGGACATCCAAGAAGATGTGAACGTGTTC CTTCGAGATGTGTCATCTGCGTACGAGGAGTGTTCATTTGGGACACATTC CCTCTTTCCGTTCGAACGAGTTGCTTTCATTTCCAACTCAATGGTAGAAT CGACTTCCTCGGATAGTGGCAATGGTGCGGGTTTATCTGAAGTAGAGAGG GCTATGACAGAGCAATACCAATTGTACGTCAAAGCCCTAGGCACAAAACT GGCTTCCTTAACTCGCGATAGCCGAAGGAACCCGATATCGGCTCCAACCA ATATTGTTGCTTACGTCATCTCGCCGTTTGAGAAAAAGCGGACTGCGGCG AATGTAGCGCTCATGCGTGCCGTTTCCCCATTGGTGAACGCCGTCCCTGA TGCCATACCCTCAGGTATGGGTGCCACACCACCCATCCCAAACCTTCCTG CTGCTCCATGGAGGGCCTCTTCATCGAAGGGGATCGTCTCCTTGACCGTA AGGATTCTCCCTCGGGAAGTTGTTGATCGGAATCTTTCTGGTTCTGCTGA GACGGACCGCATGAGTGATCGCTCTTTACGGCCCCAGCTGATGAAAGCCG TCTCGTTCGCTGTGTTCAATTCCATTCGCACGAAGAGAGTGAGGATACCA AGCATTGACAGTGAAGTTGCGAGTGTCCTCTCACGTGCATCACTCATGCC GGACGATCTTATGTCCCCAATGACGCCGGACATTGTGGCAGAGTCACCTG GAGGAGCCTCGATAACTCCTGTGTCACCGTTAGGTGCCAACACCGAAGAT GGTGTGTCGCATACCACGCAAGTTGCTGCTCAAGGCTTGCATGTCGGACA CGTTGATCAGAGTTGTGCGCTTTCCCCCTCATTTCTTTATGAGCCGGCCA TCGTATTAGCAGGGGTAGGAAAGCACATGGGACAAACTAATTCACGTGCC GACATTGTTCTGCATCTAGCGTACACGTTCTGCGATGCGACCTCTAGGTT TGTGTTTGCCTGGACAGATCAAAGGGGCGAACTACTAGATATCGCCACGG TACCTGTTGTCAGAGCCGCTATGACATCATCAAGGCGGAAGGCCTTCTGG GGCATGTGGGCTCGAGGGCAGAGATGGAGAATATCATATGTCGACGAAGT TCATGCGACTGTGTCCCGACTTGGCCAAATGACTCCAGGGGAACTGGAAG ACTGGGACTGGGTAATCGGGAAAGTAATGTCATCGAAGTCGAGCTTGTCT GAAAAGAGCTCTGACGAAGATAATGTTTCTGTAGTGAGGAGATTCCCACC ACTGCAGCAGCAAAAACCCGATGACGTGAACGATGTCTATACAGAGTTCT CGACACCCGCAACCCCAGGTGTATCGCAACCGACTAGTTCTGGAGCAGCG TCTAAAGGAGCACCGTCGATTGACGTGAAAATGCCGCCCGTGTGTTCAGT GTCCGTGGTGAGTGTTTGTAATCTAGAGACGCATTTGTTCTTGGAGGAGT CAATGGATCTGAACGCAGACAGACGGGATTTCGCTATAGTTGGGAAGGAG CGCCTGTCTAGAGGGAAGAACGTACAAGCCACCGCTGTACTAGTTCGGTA TGAGAGTGAAGGCATGAAAGCGCTTGAGGTCAACGTGTTGCGGCATTATG GTAGTGCTGGGCATAGTGAGGAAATGTCGGACGAACGGTCGCCGTGGGAT TCGCTTGATGTGCAGACTATAGCACATACAATTGCTTCGAACTTCCATGA GCTGAGGTACACGACGTCACCTCCGTGTTGGCCCGCGCAAAAGTGGCTTA GCATGTATCCCGTCCATATGGATGCAATTCGTGGCTACCAAGCGAATTTG AGATTGCTGCATCGACATGGACTCGGAGCGCAGTCCGCAAGCTCGCGGTA G back to topprotein sequence of Gcaud3580.t1 >Gcaud3580.t1 ID=Gcaud3580.t1|Name=Gcaud3580.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1667bp
MQPPPTFKPPVSVSVLALQNLSTVPFIRLALRSNPLTNLASPVARRAKWL EHGVGPQTAFPAVALALLAEQLPAALASLVRPSPPKPSPKPSRNPLTTGS LWVFGATPTLESAKSLLSDVFLVEEQGMWTAASSPVHTHAFTTAIHRAIV LALQSQGALRVANQVVHPSVGLSYTFSVSLSAPPESRIIIRVAVKNSKAR KIADHDLLRDSKSPLNVVTAPLGTPAVLSPRAPAGDALTESVLNRWREAG MYPCGPSSSADLDTSVVFVKFENGLEAPFPRAVVLTNEPLAPPEPIRSTD ISRASLHVKKSAKASNLWKSRKRPRSPSPCSPPAGNTGVAPSVPSEPPPS CEEPSEPYVDDAPTAQTINAAIRSLQQNGNKDSIPVLQHPLVEPVFAPVL GSSDPTKSPLQSSLKGDPTIAQGGSATGDVGLSVAQEQKSEPVPVSEQNV KTEPSTFAINAGNGLDSFPLDGDVSTSQDFLHGGAGIGMTDFSTLDEVAE FFRDGVDERLQEEQNNPVANDNSAHPRPENTQGLTEHNLNVADAMQQVSK PEGQTARMDVDSVPIDSSVTRMGVSDGLSVSDDKLKSMSPTDLVRAALRS FRSPMVPDKPSNSGVKEKLSAFFEDDFTERRRARLCTSQRITKARRLSKL YNPQSRFRLLKTSQDDDSKGFLKSDEGISNEGEGISNRKTLYIPRKKLKA FSRLRQLGEVKDLSLLRTESTWEFSESDDESEPKAHESPKTSFSSATLLS LNDLDRSSQKGDHQATIGERNSETDALKLADSVAIDCASACYVLSAERTP QPGFPSALAENAFSPSPSHGVREEDQKPAATVQISHNANKRFLPHPSTKT HMPPISGSPCGRSSTKRDGDMYNLMSLLEMQLFSMNELSLFRGNMNDFTD CKQRASTEMETDMVSSATMRRVLLGLPRALETSQVFKTCLESLGCGPKLS ENNAREFCIPDTETKTDSPEQNVPSVLGPLTINEYMGRSAAVFPLNPPKV CVGYDKEWMETFGGAIPTWEKAGLEPYSERKNVEYVAIAPEDIQEDVNVF LRDVSSAYEECSFGTHSLFPFERVAFISNSMVESTSSDSGNGAGLSEVER AMTEQYQLYVKALGTKLASLTRDSRRNPISAPTNIVAYVISPFEKKRTAA NVALMRAVSPLVNAVPDAIPSGMGATPPIPNLPAAPWRASSSKGIVSLTV RILPREVVDRNLSGSAETDRMSDRSLRPQLMKAVSFAVFNSIRTKRVRIP SIDSEVASVLSRASLMPDDLMSPMTPDIVAESPGGASITPVSPLGANTED GVSHTTQVAAQGLHVGHVDQSCALSPSFLYEPAIVLAGVGKHMGQTNSRA DIVLHLAYTFCDATSRFVFAWTDQRGELLDIATVPVVRAAMTSSRRKAFW GMWARGQRWRISYVDEVHATVSRLGQMTPGELEDWDWVIGKVMSSKSSLS EKSSDEDNVSVVRRFPPLQQQKPDDVNDVYTEFSTPATPGVSQPTSSGAA SKGAPSIDVKMPPVCSVSVVSVCNLETHLFLEESMDLNADRRDFAIVGKE RLSRGKNVQATAVLVRYESEGMKALEVNVLRHYGSAGHSEEMSDERSPWD SLDVQTIAHTIASNFHELRYTTSPPCWPAQKWLSMYPVHMDAIRGYQANL RLLHRHGLGAQSASSR* back to topmRNA from alignment at NODE_1059_length_14467_cov_3.827977:97..5097+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud3580.t1 ID=Gcaud3580.t1|Name=Gcaud3580.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5001bp|location=Sequence derived from alignment at NODE_1059_length_14467_cov_3.827977:97..5097+ (Gracilaria caudata M_176_S67 male) ATGCAGCCCCCTCCAACCTTCAAGCCCCCCGTCAGTGTCTCCGTGCTTGC
CCTTCAGAACCTCTCCACAGTCCCGTTCATCCGCCTCGCGCTTCGCTCCA
ACCCACTGACAAACCTCGCTTCGCCTGTCGCCCGCCGCGCGAAGTGGCTG
GAACATGGAGTGGGCCCTCAAACCGCTTTCCCCGCCGTCGCACTTGCGCT
TCTTGCCGAGCAGCTTCCCGCCGCGCTTGCCTCCCTTGTACGCCCGTCCC
CGCCAAAGCCATCGCCAAAGCCTTCTCGCAATCCTCTGACGACCGGCTCG
TTGTGGGTGTTTGGAGCCACTCCAACATTAGAATCCGCCAAAAGCTTGCT
CTCAGATGTCTTCCTTGTGGAAGAACAAGGAATGTGGACCGCCGCCTCAT
CTCCGGTTCATACCCACGCGTTCACCACCGCCATTCACCGCGCCATCGTG
CTAGCCCTTCAATCGCAAGGCGCACTCCGCGTTGCTAATCAGGTCGTACA
CCCTTCGGTTGGCCTCTCCTATACCTTCTCTGTATCGCTCTCTGCCCCAC
CCGAATCTCGCATTATCATTCGAGTCGCTGTCAAGAATTCAAAGGCGCGC
AAAATCGCCGACCATGACCTGCTGCGCGACTCTAAGAGCCCCTTAAACGT
TGTAACTGCACCCCTTGGCACCCCAGCCGTGTTGTCTCCTCGTGCGCCGG
CTGGTGATGCTTTGACAGAGTCTGTTCTCAACAGATGGCGGGAGGCTGGC
ATGTATCCTTGTGGACCATCCTCTTCAGCGGACTTGGACACTTCAGTGGT
GTTTGTCAAGTTCGAAAATGGATTAGAAGCTCCCTTTCCAAGAGCTGTAG
TTCTTACCAACGAGCCGCTGGCACCTCCTGAGCCAATTAGGTCCACGGAC
ATATCTCGAGCTTCTCTTCATGTCAAGAAGAGTGCCAAAGCTTCGAACTT
GTGGAAGTCGAGAAAGCGGCCCAGGTCTCCTTCCCCGTGTAGCCCTCCTG
CTGGCAATACTGGTGTTGCTCCCTCAGTACCTTCGGAACCCCCGCCGTCT
TGTGAGGAGCCTTCTGAGCCATACGTCGATGATGCTCCGACTGCACAGAC
AATCAATGCTGCAATTCGATCCCTTCAGCAAAATGGAAACAAAGACTCTA
TTCCCGTTTTGCAACATCCACTCGTTGAACCGGTTTTTGCGCCTGTACTG
GGCAGTTCTGACCCTACCAAGTCGCCCTTGCAAAGCTCATTGAAAGGGGA
TCCAACCATTGCACAAGGTGGAAGTGCGACAGGAGACGTTGGCCTGAGTG
TTGCTCAGGAGCAGAAGAGTGAGCCAGTTCCCGTCTCGGAACAGAACGTG
AAGACTGAGCCTTCAACATTTGCTATTAACGCCGGCAATGGACTGGACTC
TTTCCCACTGGATGGCGATGTTTCCACCTCACAAGATTTCCTGCACGGTG
GGGCTGGGATAGGCATGACAGACTTCAGTACTCTAGACGAAGTTGCTGAA
TTCTTCCGAGACGGTGTAGACGAACGCCTTCAGGAAGAACAGAATAACCC
TGTTGCAAACGACAATTCGGCTCATCCTCGCCCTGAAAATACACAAGGAT
TGACCGAACATAACTTGAACGTTGCAGATGCAATGCAGCAGGTTAGTAAA
CCTGAGGGGCAGACTGCAAGAATGGATGTAGATTCAGTGCCCATTGATTC
ATCTGTCACACGCATGGGCGTTAGCGATGGTCTATCTGTGTCAGATGACA
AATTGAAATCAATGTCACCCACTGATCTTGTGCGCGCAGCTTTGAGAAGC
TTTCGTTCTCCTATGGTTCCAGACAAACCATCGAATTCGGGTGTCAAGGA
AAAGCTCAGTGCGTTTTTCGAGGACGATTTCACTGAACGTCGTCGTGCAA
GGCTGTGTACCTCTCAGCGAATCACTAAAGCCAGGAGACTGTCAAAGCTA
TACAACCCGCAATCGAGGTTTCGTCTCCTGAAGACGTCTCAGGACGATGA
CTCTAAAGGATTTCTAAAAAGTGATGAGGGCATTAGCAATGAAGGCGAGG
GCATAAGCAACCGTAAGACTTTGTATATACCTCGGAAAAAGCTGAAAGCT
TTCTCTAGACTCCGTCAGCTAGGAGAAGTCAAAGACCTGTCGCTGCTAAG
AACAGAATCAACATGGGAATTCTCAGAATCAGATGACGAATCCGAACCTA
AGGCCCACGAATCGCCAAAGACATCGTTTTCGTCTGCAACTTTGCTGTCC
TTAAACGACCTTGATCGCTCTAGTCAAAAAGGCGACCATCAAGCCACGAT
CGGGGAACGCAATTCTGAGACCGATGCGTTGAAACTGGCAGACTCGGTTG
CCATTGACTGTGCAAGCGCGTGTTACGTGTTATCTGCAGAACGCACCCCA
CAACCTGGGTTTCCGTCGGCCCTCGCCGAGAACGCTTTCTCGCCGAGCCC
TTCGCATGGAGTCCGGGAGGAGGATCAGAAGCCTGCAGCTACAGTTCAAA
TATCTCACAATGCGAACAAAAGGTTCCTACCGCATCCGTCGACTAAGACA
CATATGCCTCCAATATCAGGTTCCCCTTGTGGAAGGTCTTCGACAAAGAG
AGATGGAGACATGTACAATCTTATGTCCCTACTTGAAATGCAACTGTTCT
CAATGAATGAACTCTCCTTGTTTCGAGGAAATATGAATGATTTTACAGAT
TGTAAGCAAAGGGCATCTACGGAGATGGAGACAGATATGGTTTCTTCAGC
TACAATGCGGCGAGTACTCTTGGGGCTGCCACGAGCTTTGGAAACAAGTC
AGGTATTCAAAACATGCTTGGAGTCTCTTGGGTGCGGTCCCAAGTTATCG
GAGAACAACGCTCGAGAGTTTTGCATACCGGATACCGAGACCAAAACTGA
TAGCCCGGAACAAAACGTGCCCAGTGTGCTAGGTCCGCTTACTATCAATG
AGTACATGGGACGATCTGCGGCCGTGTTTCCTCTAAACCCTCCAAAAGTG
TGTGTCGGCTATGATAAGGAATGGATGGAGACTTTTGGTGGGGCTATCCC
GACTTGGGAGAAAGCTGGGCTTGAGCCGTATAGTGAGCGGAAGAATGTGG
AATACGTTGCGATTGCACCGGAGGACATCCAAGAAGATGTGAACGTGTTC
CTTCGAGATGTGTCATCTGCGTACGAGGAGTGTTCATTTGGGACACATTC
CCTCTTTCCGTTCGAACGAGTTGCTTTCATTTCCAACTCAATGGTAGAAT
CGACTTCCTCGGATAGTGGCAATGGTGCGGGTTTATCTGAAGTAGAGAGG
GCTATGACAGAGCAATACCAATTGTACGTCAAAGCCCTAGGCACAAAACT
GGCTTCCTTAACTCGCGATAGCCGAAGGAACCCGATATCGGCTCCAACCA
ATATTGTTGCTTACGTCATCTCGCCGTTTGAGAAAAAGCGGACTGCGGCG
AATGTAGCGCTCATGCGTGCCGTTTCCCCATTGGTGAACGCCGTCCCTGA
TGCCATACCCTCAGGTATGGGTGCCACACCACCCATCCCAAACCTTCCTG
CTGCTCCATGGAGGGCCTCTTCATCGAAGGGGATCGTCTCCTTGACCGTA
AGGATTCTCCCTCGGGAAGTTGTTGATCGGAATCTTTCTGGTTCTGCTGA
GACGGACCGCATGAGTGATCGCTCTTTACGGCCCCAGCTGATGAAAGCCG
TCTCGTTCGCTGTGTTCAATTCCATTCGCACGAAGAGAGTGAGGATACCA
AGCATTGACAGTGAAGTTGCGAGTGTCCTCTCACGTGCATCACTCATGCC
GGACGATCTTATGTCCCCAATGACGCCGGACATTGTGGCAGAGTCACCTG
GAGGAGCCTCGATAACTCCTGTGTCACCGTTAGGTGCCAACACCGAAGAT
GGTGTGTCGCATACCACGCAAGTTGCTGCTCAAGGCTTGCATGTCGGACA
CGTTGATCAGAGTTGTGCGCTTTCCCCCTCATTTCTTTATGAGCCGGCCA
TCGTATTAGCAGGGGTAGGAAAGCACATGGGACAAACTAATTCACGTGCC
GACATTGTTCTGCATCTAGCGTACACGTTCTGCGATGCGACCTCTAGGTT
TGTGTTTGCCTGGACAGATCAAAGGGGCGAACTACTAGATATCGCCACGG
TACCTGTTGTCAGAGCCGCTATGACATCATCAAGGCGGAAGGCCTTCTGG
GGCATGTGGGCTCGAGGGCAGAGATGGAGAATATCATATGTCGACGAAGT
TCATGCGACTGTGTCCCGACTTGGCCAAATGACTCCAGGGGAACTGGAAG
ACTGGGACTGGGTAATCGGGAAAGTAATGTCATCGAAGTCGAGCTTGTCT
GAAAAGAGCTCTGACGAAGATAATGTTTCTGTAGTGAGGAGATTCCCACC
ACTGCAGCAGCAAAAACCCGATGACGTGAACGATGTCTATACAGAGTTCT
CGACACCCGCAACCCCAGGTGTATCGCAACCGACTAGTTCTGGAGCAGCG
TCTAAAGGAGCACCGTCGATTGACGTGAAAATGCCGCCCGTGTGTTCAGT
GTCCGTGGTGAGTGTTTGTAATCTAGAGACGCATTTGTTCTTGGAGGAGT
CAATGGATCTGAACGCAGACAGACGGGATTTCGCTATAGTTGGGAAGGAG
CGCCTGTCTAGAGGGAAGAACGTACAAGCCACCGCTGTACTAGTTCGGTA
TGAGAGTGAAGGCATGAAAGCGCTTGAGGTCAACGTGTTGCGGCATTATG
GTAGTGCTGGGCATAGTGAGGAAATGTCGGACGAACGGTCGCCGTGGGAT
TCGCTTGATGTGCAGACTATAGCACATACAATTGCTTCGAACTTCCATGA
GCTGAGGTACACGACGTCACCTCCGTGTTGGCCCGCGCAAAAGTGGCTTA
GCATGTATCCCGTCCATATGGATGCAATTCGTGGCTACCAAGCGAATTTG
AGATTGCTGCATCGACATGGACTCGGAGCGCAGTCCGCAAGCTCGCGGTA
G back to topCoding sequence (CDS) from alignment at NODE_1059_length_14467_cov_3.827977:97..5097+ >Gcaud3580.t1 ID=Gcaud3580.t1|Name=Gcaud3580.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=5001bp|location=Sequence derived from alignment at NODE_1059_length_14467_cov_3.827977:97..5097+ (Gracilaria caudata M_176_S67 male) ATGCAGCCCCCTCCAACCTTCAAGCCCCCCGTCAGTGTCTCCGTGCTTGC CCTTCAGAACCTCTCCACAGTCCCGTTCATCCGCCTCGCGCTTCGCTCCA ACCCACTGACAAACCTCGCTTCGCCTGTCGCCCGCCGCGCGAAGTGGCTG GAACATGGAGTGGGCCCTCAAACCGCTTTCCCCGCCGTCGCACTTGCGCT TCTTGCCGAGCAGCTTCCCGCCGCGCTTGCCTCCCTTGTACGCCCGTCCC CGCCAAAGCCATCGCCAAAGCCTTCTCGCAATCCTCTGACGACCGGCTCG TTGTGGGTGTTTGGAGCCACTCCAACATTAGAATCCGCCAAAAGCTTGCT CTCAGATGTCTTCCTTGTGGAAGAACAAGGAATGTGGACCGCCGCCTCAT CTCCGGTTCATACCCACGCGTTCACCACCGCCATTCACCGCGCCATCGTG CTAGCCCTTCAATCGCAAGGCGCACTCCGCGTTGCTAATCAGGTCGTACA CCCTTCGGTTGGCCTCTCCTATACCTTCTCTGTATCGCTCTCTGCCCCAC CCGAATCTCGCATTATCATTCGAGTCGCTGTCAAGAATTCAAAGGCGCGC AAAATCGCCGACCATGACCTGCTGCGCGACTCTAAGAGCCCCTTAAACGT TGTAACTGCACCCCTTGGCACCCCAGCCGTGTTGTCTCCTCGTGCGCCGG CTGGTGATGCTTTGACAGAGTCTGTTCTCAACAGATGGCGGGAGGCTGGC ATGTATCCTTGTGGACCATCCTCTTCAGCGGACTTGGACACTTCAGTGGT GTTTGTCAAGTTCGAAAATGGATTAGAAGCTCCCTTTCCAAGAGCTGTAG TTCTTACCAACGAGCCGCTGGCACCTCCTGAGCCAATTAGGTCCACGGAC ATATCTCGAGCTTCTCTTCATGTCAAGAAGAGTGCCAAAGCTTCGAACTT GTGGAAGTCGAGAAAGCGGCCCAGGTCTCCTTCCCCGTGTAGCCCTCCTG CTGGCAATACTGGTGTTGCTCCCTCAGTACCTTCGGAACCCCCGCCGTCT TGTGAGGAGCCTTCTGAGCCATACGTCGATGATGCTCCGACTGCACAGAC AATCAATGCTGCAATTCGATCCCTTCAGCAAAATGGAAACAAAGACTCTA TTCCCGTTTTGCAACATCCACTCGTTGAACCGGTTTTTGCGCCTGTACTG GGCAGTTCTGACCCTACCAAGTCGCCCTTGCAAAGCTCATTGAAAGGGGA TCCAACCATTGCACAAGGTGGAAGTGCGACAGGAGACGTTGGCCTGAGTG TTGCTCAGGAGCAGAAGAGTGAGCCAGTTCCCGTCTCGGAACAGAACGTG AAGACTGAGCCTTCAACATTTGCTATTAACGCCGGCAATGGACTGGACTC TTTCCCACTGGATGGCGATGTTTCCACCTCACAAGATTTCCTGCACGGTG GGGCTGGGATAGGCATGACAGACTTCAGTACTCTAGACGAAGTTGCTGAA TTCTTCCGAGACGGTGTAGACGAACGCCTTCAGGAAGAACAGAATAACCC TGTTGCAAACGACAATTCGGCTCATCCTCGCCCTGAAAATACACAAGGAT TGACCGAACATAACTTGAACGTTGCAGATGCAATGCAGCAGGTTAGTAAA CCTGAGGGGCAGACTGCAAGAATGGATGTAGATTCAGTGCCCATTGATTC ATCTGTCACACGCATGGGCGTTAGCGATGGTCTATCTGTGTCAGATGACA AATTGAAATCAATGTCACCCACTGATCTTGTGCGCGCAGCTTTGAGAAGC TTTCGTTCTCCTATGGTTCCAGACAAACCATCGAATTCGGGTGTCAAGGA AAAGCTCAGTGCGTTTTTCGAGGACGATTTCACTGAACGTCGTCGTGCAA GGCTGTGTACCTCTCAGCGAATCACTAAAGCCAGGAGACTGTCAAAGCTA TACAACCCGCAATCGAGGTTTCGTCTCCTGAAGACGTCTCAGGACGATGA CTCTAAAGGATTTCTAAAAAGTGATGAGGGCATTAGCAATGAAGGCGAGG GCATAAGCAACCGTAAGACTTTGTATATACCTCGGAAAAAGCTGAAAGCT TTCTCTAGACTCCGTCAGCTAGGAGAAGTCAAAGACCTGTCGCTGCTAAG AACAGAATCAACATGGGAATTCTCAGAATCAGATGACGAATCCGAACCTA AGGCCCACGAATCGCCAAAGACATCGTTTTCGTCTGCAACTTTGCTGTCC TTAAACGACCTTGATCGCTCTAGTCAAAAAGGCGACCATCAAGCCACGAT CGGGGAACGCAATTCTGAGACCGATGCGTTGAAACTGGCAGACTCGGTTG CCATTGACTGTGCAAGCGCGTGTTACGTGTTATCTGCAGAACGCACCCCA CAACCTGGGTTTCCGTCGGCCCTCGCCGAGAACGCTTTCTCGCCGAGCCC TTCGCATGGAGTCCGGGAGGAGGATCAGAAGCCTGCAGCTACAGTTCAAA TATCTCACAATGCGAACAAAAGGTTCCTACCGCATCCGTCGACTAAGACA CATATGCCTCCAATATCAGGTTCCCCTTGTGGAAGGTCTTCGACAAAGAG AGATGGAGACATGTACAATCTTATGTCCCTACTTGAAATGCAACTGTTCT CAATGAATGAACTCTCCTTGTTTCGAGGAAATATGAATGATTTTACAGAT TGTAAGCAAAGGGCATCTACGGAGATGGAGACAGATATGGTTTCTTCAGC TACAATGCGGCGAGTACTCTTGGGGCTGCCACGAGCTTTGGAAACAAGTC AGGTATTCAAAACATGCTTGGAGTCTCTTGGGTGCGGTCCCAAGTTATCG GAGAACAACGCTCGAGAGTTTTGCATACCGGATACCGAGACCAAAACTGA TAGCCCGGAACAAAACGTGCCCAGTGTGCTAGGTCCGCTTACTATCAATG AGTACATGGGACGATCTGCGGCCGTGTTTCCTCTAAACCCTCCAAAAGTG TGTGTCGGCTATGATAAGGAATGGATGGAGACTTTTGGTGGGGCTATCCC GACTTGGGAGAAAGCTGGGCTTGAGCCGTATAGTGAGCGGAAGAATGTGG AATACGTTGCGATTGCACCGGAGGACATCCAAGAAGATGTGAACGTGTTC CTTCGAGATGTGTCATCTGCGTACGAGGAGTGTTCATTTGGGACACATTC CCTCTTTCCGTTCGAACGAGTTGCTTTCATTTCCAACTCAATGGTAGAAT CGACTTCCTCGGATAGTGGCAATGGTGCGGGTTTATCTGAAGTAGAGAGG GCTATGACAGAGCAATACCAATTGTACGTCAAAGCCCTAGGCACAAAACT GGCTTCCTTAACTCGCGATAGCCGAAGGAACCCGATATCGGCTCCAACCA ATATTGTTGCTTACGTCATCTCGCCGTTTGAGAAAAAGCGGACTGCGGCG AATGTAGCGCTCATGCGTGCCGTTTCCCCATTGGTGAACGCCGTCCCTGA TGCCATACCCTCAGGTATGGGTGCCACACCACCCATCCCAAACCTTCCTG CTGCTCCATGGAGGGCCTCTTCATCGAAGGGGATCGTCTCCTTGACCGTA AGGATTCTCCCTCGGGAAGTTGTTGATCGGAATCTTTCTGGTTCTGCTGA GACGGACCGCATGAGTGATCGCTCTTTACGGCCCCAGCTGATGAAAGCCG TCTCGTTCGCTGTGTTCAATTCCATTCGCACGAAGAGAGTGAGGATACCA AGCATTGACAGTGAAGTTGCGAGTGTCCTCTCACGTGCATCACTCATGCC GGACGATCTTATGTCCCCAATGACGCCGGACATTGTGGCAGAGTCACCTG GAGGAGCCTCGATAACTCCTGTGTCACCGTTAGGTGCCAACACCGAAGAT GGTGTGTCGCATACCACGCAAGTTGCTGCTCAAGGCTTGCATGTCGGACA CGTTGATCAGAGTTGTGCGCTTTCCCCCTCATTTCTTTATGAGCCGGCCA TCGTATTAGCAGGGGTAGGAAAGCACATGGGACAAACTAATTCACGTGCC GACATTGTTCTGCATCTAGCGTACACGTTCTGCGATGCGACCTCTAGGTT TGTGTTTGCCTGGACAGATCAAAGGGGCGAACTACTAGATATCGCCACGG TACCTGTTGTCAGAGCCGCTATGACATCATCAAGGCGGAAGGCCTTCTGG GGCATGTGGGCTCGAGGGCAGAGATGGAGAATATCATATGTCGACGAAGT TCATGCGACTGTGTCCCGACTTGGCCAAATGACTCCAGGGGAACTGGAAG ACTGGGACTGGGTAATCGGGAAAGTAATGTCATCGAAGTCGAGCTTGTCT GAAAAGAGCTCTGACGAAGATAATGTTTCTGTAGTGAGGAGATTCCCACC ACTGCAGCAGCAAAAACCCGATGACGTGAACGATGTCTATACAGAGTTCT CGACACCCGCAACCCCAGGTGTATCGCAACCGACTAGTTCTGGAGCAGCG TCTAAAGGAGCACCGTCGATTGACGTGAAAATGCCGCCCGTGTGTTCAGT GTCCGTGGTGAGTGTTTGTAATCTAGAGACGCATTTGTTCTTGGAGGAGT CAATGGATCTGAACGCAGACAGACGGGATTTCGCTATAGTTGGGAAGGAG CGCCTGTCTAGAGGGAAGAACGTACAAGCCACCGCTGTACTAGTTCGGTA TGAGAGTGAAGGCATGAAAGCGCTTGAGGTCAACGTGTTGCGGCATTATG GTAGTGCTGGGCATAGTGAGGAAATGTCGGACGAACGGTCGCCGTGGGAT TCGCTTGATGTGCAGACTATAGCACATACAATTGCTTCGAACTTCCATGA GCTGAGGTACACGACGTCACCTCCGTGTTGGCCCGCGCAAAAGTGGCTTA GCATGTATCCCGTCCATATGGATGCAATTCGTGGCTACCAAGCGAATTTG AGATTGCTGCATCGACATGGACTCGGAGCGCAGTCCGCAAGCTCGCGGTA G back to top
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