Gcaud2913.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2913.t1
Unique NameGcaud2913.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length177
Homology
[Close]
BLAST of Gcaud2913.t1 vs. uniprot
Match: A0A2V3IXD3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXD3_9FLOR)

HSP 1 Score: 195 bits (495), Expect = 9.910e-61
Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = 0 
Query:    1 MNIDSPPREPLGDEALAPVAELQQYGASIVEELDRAETELTSAENQPFNGISPQVMEDISRLREKQFEMFRQHVEIEQQYKIQNAVTEENNVQKMAFGAIAKTMRKKEKATAALLQHLERFDDELREVMDKFETCRATQEEAAASSEID 149
            MN D+P +E L  + LAPVAELQ+YGASI+ ELDRAE EL  +ENQPF+GISPQVM+DIS LR+KQF+MFRQHVEIEQQYKIQNAV+E NNV +  F +IAKT+RKKEKATA LL  LE+FD +LR+VMDKFETCRA Q E  +S + D
Sbjct:    1 MNADTPSQEHLTTDTLAPVAELQEYGASIISELDRAEAELNDSENQPFSGISPQVMQDISELRKKQFDMFRQHVEIEQQYKIQNAVSEGNNVHQPGFTSIAKTLRKKEKATAGLLHKLEQFDGQLRDVMDKFETCRAAQREQDSSVQTD 149
[Close]
BLAST of Gcaud2913.t1 vs. uniprot
Match: M2X399_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X399_GALSU)

HSP 1 Score: 60.1 bits (144), Expect = 2.110e-8
Identity = 35/112 (31.25%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:   21 ELQQYGASIVEELDRAETELTSAENQPFNGISPQVMEDISRLREKQFEMFRQHVEIEQQYKIQNA-VTEENNVQKMAFGAIAKTMRKKEKATAALLQHLERFDDELREVMDK 131
            +L +    +  EL  AE  L  + N+PF    P+++E + RLR KQFE++    E+E+++   +   +     + ++FG  A+++R++E AT  +LQ +   D ELR V+ K
Sbjct:   12 QLDELEEGLEAELAAAEARLADSRNRPFGERGPELLEQVERLRRKQFEVYIDQAELERRFPFPSKKFSSSGEKEDLSFGTFAESLREREVATDRILQKITDLDVELRSVLTK 123
The following BLAST results are available for this feature:
BLAST of Gcaud2913.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXD3_9FLOR9.910e-6169.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M2X399_GALSU2.110e-831.25Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_18_length_79438_cov_4.566121contigNODE_18_length_79438_cov_4.566121:71483..72013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2913.t1Gcaud2913.t1Gracilaria caudata M_176_S67 malemRNANODE_18_length_79438_cov_4.566121 71483..72013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2913.t1 ID=Gcaud2913.t1|Name=Gcaud2913.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=177bp
MNIDSPPREPLGDEALAPVAELQQYGASIVEELDRAETELTSAENQPFNG
ISPQVMEDISRLREKQFEMFRQHVEIEQQYKIQNAVTEENNVQKMAFGAI
AKTMRKKEKATAALLQHLERFDDELREVMDKFETCRATQEEAAASSEIDK
TGSAQRRTSPEQSANDDTSIHGQNGR*
back to top