Gcaud6937.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6937.t1
Unique NameGcaud6937.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1263
Homology
BLAST of Gcaud6937.t1 vs. uniprot
Match: A0A2V3IQG1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQG1_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 1.050e-48
Identity = 103/207 (49.76%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    1 MAAPTVLPTTGFPYTEPAVSAQTAKTSTCCASIRGAPGRRFSSAPKSVTRGEPIVSHLRSFLEAASVK----PRPETELPQFTLGMHLKDGVAKRLEWKALEAEIARAEAVTAQTKSGLSPKARQRYLLDLKQSVSRAMYDLLKDERCEDEDMRSYVTDILVWSDPQNARKAIAKGVITEYAFELRAKAEEGYRYPVIILATEKAGF 203
            MAA   LPT   P   P+   QT  ++T   +++    RRF  AP S     PIV +LRS LE A+VK    P    + P F LGM +KDGVAKRLEWKAL  EIARA+AVTA T S +S K+RQ++L DL  S++ ++YDLLKDE CEDED R+YV D+ VW D QNARKAI   V++ +    ++  ++ YR+PV+ LAT KA F
Sbjct:    1 MAASVRLPTRAAPVNPPSKINQTPPSTTASRTLQPRSARRFIPAP-SPNLQPPIVQYLRSLLETATVKSKSIPPVPLDHPHFALGMQVKDGVAKRLEWKALLTEIARADAVTANTNSSISSKSRQQFLFDLSPSIANSVYDLLKDESCEDEDARTYVVDVFVWPDAQNARKAIINEVVSTFRRMPKSDVQQSYRFPVVTLATGKAAF 206          
BLAST of Gcaud6937.t1 vs. uniprot
Match: A0A2V3J098_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J098_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 1.380e-43
Identity = 87/190 (45.79%), Postives = 123/190 (64.74%), Query Frame = 0
Query:  116 SPKARQRYLLDLKQSVSRAMYDLLKDERCEDEDMRSYVTDILVWSDPQNARKAIAKGVITEYAFELRAKAEEGYRYPVIILATEKAGFQTDQGVISARNR-NSCYLKGDHIHFLEAWREAVTGEAEILTVVGDSAASMRDSLGAVLEGSDHHWVSTPILIVMYASCDSAITANLSSVRRLCDANGITLCV 304
            SPK RQ++L DL  S + +++DL KDE CE ED R+YVTD+LV SD Q+ARKAI   V++ +    ++  ++ YRYPV+ILATEKA F     V     + N+  + G    FL  WR AV  +A +L + G+++  ++ SL AVLE     W+STP+ +V+Y S DS ITANLSS+RR+C++  I  CV
Sbjct:   71 SPKTRQQFLFDLSASTANSIHDLPKDESCEGEDARTYVTDLLVCSDAQSARKAIFNDVVSTFRRMHKSDVQQSYRYPVVILATEKAAFFEPYQVRGDHEQTNAQNVYGAQAQFLALWRGAVAHDANVLALAGENSDRVKASLEAVLEADGLQWISTPVSLVLYVSFDSVITANLSSIRRICESQNIKFCV 260          
BLAST of Gcaud6937.t1 vs. uniprot
Match: A0A2V3IP27_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP27_9FLOR)

HSP 1 Score: 140 bits (353), Expect = 7.920e-35
Identity = 72/148 (48.65%), Postives = 100/148 (67.57%), Query Frame = 0
Query:   82 MHLKDGVAKRLEWKALEAEIARAEAVTAQTKSGLSPKARQRYLLDLKQSVSRAMYDLLKDERCEDEDMRSYVTDILVWSDPQNARKAIAKGVITEYAFELRAKAEEGYRYPVIILATEKAGFQTDQGVISARNRNSCY-LKGDHIHFL 228
            MH+K+GVAKRLEWKAL AE AR+++VTA T S +SPK +Q++L  L  S + +++DLLKDE CEDED R+YV D+L WS+ QNARKAI   V++ +    +   ++ YR+PV+IL+TEKA F     V+    + S   + G    FL
Sbjct:    1 MHVKEGVAKRLEWKALLAEAARSDSVTANTNSSISPKEQQQFLFYLSASNANSVHDLLKDEICEDEDARTYVIDVLAWSEAQNARKAIFSDVVSPFRRVHKPDVQQSYRFPVVILSTEKAAFLEPYQVLGDHEQTSAQNIYGAQAQFL 148          
BLAST of Gcaud6937.t1 vs. uniprot
Match: A0A2V3IUD6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUD6_9FLOR)

HSP 1 Score: 136 bits (343), Expect = 1.760e-33
Identity = 64/122 (52.46%), Postives = 91/122 (74.59%), Query Frame = 0
Query:   82 MHLKDGVAKRLEWKALEAEIARAEAVTAQTKSGLSPKARQRYLLDLKQSVSRAMYDLLKDERCEDEDMRSYVTDILVWSDPQNARKAIAKGVITEYAFELRAKAEEGYRYPVIILATEKAGF 203
            MH+KD V+KRLEWKAL AE AR++++TA T S +SPK +Q++L DL  S + +++DLLKDE CE+ED R+YV D+LVWS+ QNARKAI   V++ +    ++  ++ YR+PV IL+TE   F
Sbjct:    1 MHVKDAVSKRLEWKALLAEAARSDSITANTNSSISPKEQQQFLFDLSASNANSIHDLLKDESCEEEDARTYVIDLLVWSEAQNARKAIFNDVVSPFRRVHKSDVQQSYRFPVAILSTENGAF 122          
The following BLAST results are available for this feature:
BLAST of Gcaud6937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IQG1_9FLOR1.050e-4849.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J098_9FLOR1.380e-4345.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IP27_9FLOR7.920e-3548.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUD6_9FLOR1.760e-3352.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..1004
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 978..992
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 829..843
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1028..1046
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1139..1153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1018..1200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 855..872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1096..1112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 803..820
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1047..1095
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 927..941
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1154..1186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 944..959
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1120..1138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 744..800
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 898..921

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_184_length_39684_cov_4.240775contigNODE_184_length_39684_cov_4.240775:34233..38186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6937.t1Gcaud6937.t1Gracilaria caudata M_176_S67 malemRNANODE_184_length_39684_cov_4.240775 34233..38186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6937.t1 ID=Gcaud6937.t1|Name=Gcaud6937.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1263bp
MAAPTVLPTTGFPYTEPAVSAQTAKTSTCCASIRGAPGRRFSSAPKSVTR
GEPIVSHLRSFLEAASVKPRPETELPQFTLGMHLKDGVAKRLEWKALEAE
IARAEAVTAQTKSGLSPKARQRYLLDLKQSVSRAMYDLLKDERCEDEDMR
SYVTDILVWSDPQNARKAIAKGVITEYAFELRAKAEEGYRYPVIILATEK
AGFQTDQGVISARNRNSCYLKGDHIHFLEAWREAVTGEAEILTVVGDSAA
SMRDSLGAVLEGSDHHWVSTPILIVMYASCDSAITANLSSVRRLCDANGI
TLCVEGPGLAFLAQAARPSDPNECLQHADVLLTNPGSWFGFEECAFTSIH
SRHPSAPYSKRDYDHSQKATNLTSRIQLEDQRLEKAVAYVTKLWTVISQV
GVPRIRVKVDAVTHIAEALIYHMRDCQSLTTSYEGVGCVVRLSYELSTSE
RGFSKIEEAGVLSAINRSLYRFVSVEAKKVQVVLVVVENISMLQFSPLRL
LNAGTFWVPEDDEIRKFSTALRQRAEFYRMCRTGAMVFMERVSLCSDVEF
LEDDNVTEDVLHWYGAFRIVPDEWQGKWVNSSSGRHIVTFLTKMLVSELS
NSFASIVRCTPSLQQLLESCSSEGPESSKMVAGSGYGRQKTMNPFHYILR
GGSSTGKKSMDQSIIDLPFSFYIHYDDVTFNAPFVSVEPRGTFPVNRAYR
HACTAAEIIVAVLEVVLTKYRSQGAVESLNHDLVQDSVESGEALIQSSLS
PKSNTYKEHDSQPSRANASSLEESEMTSTDTTESRVDGFVSASNTLHARS
PMLSEVDRSHEHREDVSPHPMGDKCITPKQGDSEQDHKQDCNELPGEGVT
NEDLHITESPPSSLSATPAQLGKGCQSRIPLLGLLTAEHPSSDADSEGGD
GEYTEDEDSLFTEEEASTLTDEGSDYQDTGSSDHASEDGSSENESSEGSA
EEEYSSSEENEESEKSSSSSDTESEYENSILEDIRDSKTEAKAAPELTNG
NVTRSRWLHSWFRGRWVQPTSSKTDLKAQDSSPERNSAKTESSRRNASHF
KVPSTRNSTHASYSGSETGESESVISSESGQSSSTECSDANPSERSLETD
NPRRRSKEKSEAPTASRQWGWWKQKPSTSSGSEEASNSFDDQRNGRAEDA
DDISSSYDNGSVFPDAFSIPSSEYSSTSTQESESESEGVPELALRRTLTS
PEDPGFRTLVIMAPQVAGMQPTAEVWLALKKSRAHQIDVGDTDPFALKVV
KSACKQLKVLNR*
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