Gcaud6925.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud6925.t1
Unique NameGcaud6925.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length91
Homology
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A2V3IR05_9FLOR (Mitochondrial import inner membrane translocase subunit TIM10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR05_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 3.000e-39
Identity = 69/90 (76.67%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    1 MNVPQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQQGQAPQ 90
            MN+PQ QGNLDAMK EMIFVADLFN+MSE CFKKCVPRFHDGDLNTGE         P V      GKYVEATNKVGEVMQQLQQGQAPQ
Sbjct:    1 MNMPQGQGNLDAMKAEMIFVADLFNKMSEMCFKKCVPRFHDGDLNTGE---------PVVCADRCVGKYVEATNKVGEVMQQLQQGQAPQ 81          
BLAST of Gcaud6925.t1 vs. uniprot
Match: M2Y0K8_GALSU (Mitochondrial protein translocase, MPT family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0K8_GALSU)

HSP 1 Score: 81.3 bits (199), Expect = 2.350e-18
Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    7 QGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQQG 86
            Q  LDA KTEM F AD+FN+M++ CFKKC+P++++GDLNTGE+V                 KY E T KVGEV+Q   QG
Sbjct:    5 QSALDAAKTEMNFYADMFNKMADQCFKKCIPKYNEGDLNTGEMV----------CVDRCVAKYFEVTQKVGEVLQGSMQG 74          
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A1X6P277_PORUM (zf-Tim10_DDP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P277_PORUM)

HSP 1 Score: 67.4 bits (163), Expect = 6.900e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = 0
Query:    7 QGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQQGQ 87
            Q  +D  + EM F  DLFNRM + CFKKCVPRFHD +LNTGE          +V XXXXX        KVGE++Q  QQ Q
Sbjct:    2 QNQMDVARMEMQFYTDLFNRMVDGCFKKCVPRFHDAELNTGE----------QVCXXXXXXXXXXXXXKVGEILQSEQQAQ 72          
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A067C982_SAPPC (zf-Tim10_DDP domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C982_SAPPC)

HSP 1 Score: 67.8 bits (164), Expect = 1.030e-12
Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    5 QQQGN--LDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQ 84
            QQQG   +   K EM    DLFNRM+E CFKKC  RFHD DLN GE+                 GKY++A ++VGE MQ++Q
Sbjct:   32 QQQGPSPVAMAKVEMAMYTDLFNRMAEMCFKKCNYRFHDADLNVGEMS----------CVDRCVGKYMQAHHQVGETMQRVQ 103          
BLAST of Gcaud6925.t1 vs. uniprot
Match: W4GXE3_9STRA (zf-Tim10_DDP domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4GXE3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.660e-11
Identity = 33/81 (40.74%), Postives = 42/81 (51.85%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQ 84
            P     +   K EM    DLFN+M+E CFKKC  RFHD DLN GE+                 GKY++A  +VG  MQ++Q
Sbjct:   11 PVMDQQMQMAKVEMEMYTDLFNKMAEVCFKKCNYRFHDADLNVGEMS----------CVDRCVGKYMQAHLQVGTTMQRVQ 81          
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A6G0XB81_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XB81_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 7.850e-11
Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQQ 85
            P     +   K EM    DLFN+M+E CFKKC  RFHD +LN GE+                 GKY++A  +VG+ MQ++Q+
Sbjct:   12 PAMNEQMQMAKVEMEMYTDLFNKMAEVCFKKCNYRFHDAELNVGEMS----------CVDRCVGKYMQAHLQVGKTMQRVQE 83          
BLAST of Gcaud6925.t1 vs. uniprot
Match: M1VG23_CYAM1 (Mitochondrial intermembrane space complex subunit Tim10 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VG23_CYAM1)

HSP 1 Score: 61.2 bits (147), Expect = 2.070e-10
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   10 LDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQ 84
            +D  + EM F ADLF +M+++CF+KCV R+HDG+L TGE           V       KY+ A  ++GE++Q+ Q
Sbjct:   12 VDLARREMSFYADLFQKMTDSCFRKCVTRYHDGELQTGE----------GVCVDRCVFKYMGAVQRIGELLQEGQ 76          
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A418AMM4_9STRA (zf-Tim10_DDP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AMM4_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.330e-10
Identity = 32/81 (39.51%), Postives = 43/81 (53.09%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQ 84
            P     +   K EM    DLFN+M+E CFKKC  RFHD +LN GE+                 GKY++A  +VG+ MQ++Q
Sbjct:   44 PVMDQQMQMAKVEMEMYTDLFNKMAEVCFKKCNYRFHDAELNVGEMS----------CVDRCVGKYMQAHLQVGKTMQRVQ 114          
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A7J7ID20_9RHOD (Mitochondrial import inner membrane, translocase subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ID20_9RHOD)

HSP 1 Score: 58.9 bits (141), Expect = 6.660e-9
Identity = 29/75 (38.67%), Postives = 44/75 (58.67%), Query Frame = 0
Query:   10 LDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQ 84
            +D  + EM F ADLF +M+++CF+KCV R+HD +L TGE           V       KY+ A  ++GE++Q+ Q
Sbjct:   74 VDLARREMSFYADLFQKMTDSCFRKCVTRYHDAELQTGE----------GVCVDRCVFKYMGAVQRIGELLQEGQ 138          
BLAST of Gcaud6925.t1 vs. uniprot
Match: A0A6U0JD31_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JD31_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.700e-8
Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0
Query:    4 PQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFH-DGDLNTGELVRDTFRASPRVXXXXXXGKYVEATNKVGEVMQQLQQGQAPQ 90
            PQ    L A  +EM   ADLF ++S TCF+KC  R H DGDL  GE+                  KY+EA  KVG V+Q+  + QA Q
Sbjct:   11 PQGPDPLFAATSEMEMYADLFQKISGTCFEKCASRRHRDGDLALGEMA----------CTDRCVSKYMEAMEKVGVVLQKANEQQAQQ 88          
The following BLAST results are available for this feature:
BLAST of Gcaud6925.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR05_9FLOR3.000e-3976.67Mitochondrial import inner membrane translocase su... [more]
M2Y0K8_GALSU2.350e-1850.00Mitochondrial protein translocase, MPT family n=1 ... [more]
A0A1X6P277_PORUM6.900e-1350.62zf-Tim10_DDP domain-containing protein n=1 Tax=Por... [more]
A0A067C982_SAPPC1.030e-1246.34zf-Tim10_DDP domain-containing protein n=4 Tax=Sap... [more]
W4GXE3_9STRA7.660e-1140.74zf-Tim10_DDP domain-containing protein n=3 Tax=Aph... [more]
A0A6G0XB81_9STRA7.850e-1139.02zf-Tim10_DDP domain-containing protein n=1 Tax=Aph... [more]
M1VG23_CYAM12.070e-1040.00Mitochondrial intermembrane space complex subunit ... [more]
A0A418AMM4_9STRA3.330e-1039.51zf-Tim10_DDP domain-containing protein n=2 Tax=Aph... [more]
A0A7J7ID20_9RHOD6.660e-938.67Mitochondrial import inner membrane, translocase s... [more]
A0A6U0JD31_9STRA2.700e-840.91Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810Mitochondrial import inner membrane translocase subunit tim13 like domainscoord: 5..90
e-value: 6.1E-19
score: 69.5
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 19..87
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 19..82
e-value: 4.5E-16
score: 58.2
NoneNo IPR availablePANTHERPTHR11038MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 5..85
IPR027100Mitochondrial import inner membrane translocase subunit Tim10PANTHERPTHR11038:SF16MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 5..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_184_length_39684_cov_4.240775contigNODE_184_length_39684_cov_4.240775:13265..13882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud6925.t1Gcaud6925.t1Gracilaria caudata M_176_S67 malemRNANODE_184_length_39684_cov_4.240775 13265..13882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud6925.t1 ID=Gcaud6925.t1|Name=Gcaud6925.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=91bp
MNVPQQQGNLDAMKTEMIFVADLFNRMSETCFKKCVPRFHDGDLNTGELV
RDTFRASPRVCADRCVGKYVEATNKVGEVMQQLQQGQAPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035427Tim10-like_dom_sf
IPR004217Tim10-like
IPR027100Tim10