Gcaud7793.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7793.t1
Unique Name	Gcaud7793.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	362

Homology

[Close]

BLAST of Gcaud7793.t1 vs. uniprot
Match: A0A2V3IQS4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQS4_9FLOR)

HSP 1 Score: 364 bits (935), Expect = 5.870e-122
Identity = 190/350 (54.29%), Postives = 246/350 (70.29%), Query Frame = 0

Query:    1 MTNEVHREVIYLGVIENSPFLFLRNPVPEIIKFALTFAVIFILGRLYYPSRVELQLLKKIKRSPVHKLPATLRSLVQDRSMLLAFVALVVRWTFWNVGVGKEERYASFPSPVIYRVPRPLSPRLCFNGAYQERRRFTLMEAELCARTWKARNGLTAVQYVPVVYSPKLQRFSCLSPSSMVAYGSIRIDNGTARGTEDAYVHDMHSLRHGCELNGHNCSGIESVRTHNNGTTWMVISDPIRGRLVVFILLRRLGNASLGEGYFSWLNGKSAEHILKVMLSIHLELSRATCYDTAREVPVGEKSAHLYIDLQILFCLVLLEIVLSRLEVMHGKRAAENGVLSHFSEVVVELL 350
            M NEV   V Y  +  ++PFLFL+   PE+IK  LT  +I ++ RLY PSR+E++LL+ I    + +LP+T+R+++ DR M +A VA+VVR+ FWN G+GK+ RY  F +PV+YRV +PL+P LCFNG  +E+R F L EAE C+RTWKAR+G TAVQYVP VYS + Q++SCLSPS M++YG I IDN T +G  D YVHD+ SL   C   G++CS I SV+T  NGTTWM++S P   RL +FILLRR G A+LGEGY ++  GKS + ILK++LSI LELS A CYDT REVPVGEKS+H YID++ LF LVLLE  L  +  M  K   EN      SE  V+LL
Sbjct:    1 MVNEVPHHVFYFEMRGSAPFLFLQFAFPELIKLLLTIIMILVMRRLYKPSRIEVKLLQTISGRRLRQLPSTVRAILGDRDMYIAVVAIVVRFAFWNHGLGKQLRYPPFATPVLYRVAQPLAPHLCFNGTSREKRDFVLAEAEFCSRTWKARHGWTAVQYVPAVYSQEYQKYSCLSPSRMISYGRITIDNSTYKG--DGYVHDIQSLWSNCAEVGYDCSQITSVKTSENGTTWMMLSSPKARRLGIFILLRRPGRAALGEGYRAFNEGKSLDQILKIILSIDLELSLADCYDTKREVPVGEKSSHFYIDIRSLFSLVLLECFLYWIPFMRAKEEHEN-----VSEAFVDLL 343

The following BLAST results are available for this feature:

BLAST of Gcaud7793.t1 vs. uniprot

BLAST of Gcaud7793.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IQS4_9FLOR	5.870e-122	54.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 49..80
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 100..302
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 303..322
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..48
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 81..99
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 323..361
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_1053_length_14587_cov_5.039666	contig	NODE_1053_length_14587_cov_5.039666:11725..12810 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7793.t1	Gcaud7793.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_1053_length_14587_cov_5.039666 11725..12810 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7793.t1 ID=Gcaud7793.t1|Name=Gcaud7793.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=362bp
MTNEVHREVIYLGVIENSPFLFLRNPVPEIIKFALTFAVIFILGRLYYPS
RVELQLLKKIKRSPVHKLPATLRSLVQDRSMLLAFVALVVRWTFWNVGVG
KEERYASFPSPVIYRVPRPLSPRLCFNGAYQERRRFTLMEAELCARTWKA
RNGLTAVQYVPVVYSPKLQRFSCLSPSSMVAYGSIRIDNGTARGTEDAYV
HDMHSLRHGCELNGHNCSGIESVRTHNNGTTWMVISDPIRGRLVVFILLR
RLGNASLGEGYFSWLNGKSAEHILKVMLSIHLELSRATCYDTAREVPVGE
KSAHLYIDLQILFCLVLLEIVLSRLEVMHGKRAAENGVLSHFSEVVVELL
SGEDEHELEAA*