Gcaud8423.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8423.t1
Unique NameGcaud8423.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length265
Homology
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A2V3IC14_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC14_9FLOR)

HSP 1 Score: 356 bits (914), Expect = 1.280e-121
Identity = 186/271 (68.63%), Postives = 205/271 (75.65%), Query Frame = 0
Query:    1 MKYLIYLLSLSALLAYALASNKHCPNYRTKVLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPEDDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDAAKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFF-------RDVVVMDDLFYGEPMH 264
            MK  I+ +  SAL+A   AS   CP YRT +LT  AH A G+   V  YK LLGG+DNGN PGPL  GQRSINWDAGIVPFNMPGDFFNT VTRGAV  ++GGKFAVSNPA PPPEDDRFSSLLP  ++ QFRRFSLERLFTPVLSNR    FQIPA  DAAKVSGFGAVFTDVD  RRT MVY D+NGCRIAK+ VPPK +GLSFAGLVVVD +NPKKT+PVISKV ++LGN  +  F     RRF         DVVVMDD FYGEPM+
Sbjct:    1 MKSTIFAILFSALVAIVAAS---CPRYRTIILTDAAHKAAGINGTVLRYKELLGGDDNGNAPGPLEKGQRSINWDAGIVPFNMPGDFFNTRVTRGAVLMAKGGKFAVSNPAMPPPEDDRFSSLLPKSISNQFRRFSLERLFTPVLSNRFAIKFQIPAKTDAAKVSGFGAVFTDVDKVRRTTMVYLDKNGCRIAKINVPPKGRGLSFAGLVVVDKYNPKKTIPVISKVLVKLGNTPVSRF--SELRRFHGYRPRRRTDVVVMDDFFYGEPMY 266          
BLAST of Gcaud8423.t1 vs. uniprot
Match: R7QFM2_CHOCR (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QFM2_CHOCR)

HSP 1 Score: 228 bits (582), Expect = 2.150e-71
Identity = 122/236 (51.69%), Postives = 161/236 (68.22%), Query Frame = 0
Query:   27 YRTKVLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPEDDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDAAKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEP 262
            Y+  VLT T+ +A+GL      ++N LGG DNGN  GPL SG RSINWDA  VPF+MP +FF+  VTRGAVF++   +F VSNP  PPP DDRF SLLP  +T QF+ FS +RLFTP++ NR+   F+IP     AKVSG GAVF DVDL R+T M ++ ++GC + +V VPP+N+GLSFAGL  ++        P+I +V ++LG +S++    R+  R   DVVV+DDL YGEP
Sbjct:   27 YKFAVLTATSRNANGLRRAFTTFQNALGGIDNGNEAGPLFSGFRSINWDAEAVPFDMPFNFFDKTVTRGAVFQAAKREFRVSNPV-PPPVDDRFDSLLPKRITNQFQTFSPKRLFTPLVKNRVTQIFKIPTLNKRAKVSGMGAVFVDVDLRRQTWMDFYTKSGCLLIRVFVPPRNRGLSFAGLYDLNGK------PIIWRVVMKLGTISVQDAGARYRGR--GDVVVLDDLLYGEP 253          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A6T6AU01_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AU01_9RHOD)

HSP 1 Score: 181 bits (459), Expect = 8.540e-53
Identity = 109/240 (45.42%), Postives = 147/240 (61.25%), Query Frame = 0
Query:   30 KVLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPEDDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDA------AKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEPM 263
            KV + TA +A GL +V E +++ LGG +N NNPGPL +G R INWDA IVPFNMPG+FF   VTRG    ++ GKFAVSN   P   D+RFS+ L  +    F+ FS +RLFTPVL N++   F +P T  A      A V GFG +FTDVD   +T ++ FD+   +I      PKN GL+F G V+++  +P+     I +V++ LGN  + GF  R    +  DVV MD+ FYGEP+
Sbjct:   28 KVFSATAANAIGLEAVTELFEDKLGGVNNENNPGPLTTGYREINWDAPIVPFNMPGNFFRATVTRGLQVIAKQGKFAVSN--DPNTHDNRFSTFLGQY-PGIFKTFSPQRLFTPVLENKMWIRFFVPGTNKALGQNLPALVRGFGIIFTDVDFYGKTKLILFDQYDRKIGVYNAQPKNNGLTFLG-VILEKTDPRG----IKRVRVILGNAKV-GF--RDGAAY--DVVTMDNFFYGEPI 254          
BLAST of Gcaud8423.t1 vs. uniprot
Match: B7G045_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G045_PHATC)

HSP 1 Score: 174 bits (442), Expect = 3.720e-50
Identity = 103/234 (44.02%), Postives = 133/234 (56.84%), Query Frame = 0
Query:   31 VLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNP-ASPPPEDDRFSSLLPAFVTKQFRRFSLERLFTPVLS-NRLVATFQIPATRDAAKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEP 262
            V++ T+ DADGL    E +++LLGGE+NGN   P   G R +NWDA IVPF+MPGDFF T V RG   +S+  +F VSNP     P+DD F S+ P    K F+ FS  RLFT     N  VA F +P +   A V+GFGAV  DVDL  +T + ++ ++GC IA+        GLSF GLV      P      I+KV+++LG  +I    RR       D VVMDD  Y EP
Sbjct:   40 VVSATSPDADGLKDGFEVFRDLLGGENNGNGAAPSAEGHRQVNWDAPIVPFDMPGDFFATTVDRGLNLRSKRDEFRVSNPDPKDGPKDDLFDSISPR-AAKDFQTFSAFRLFTVAGGDNEFVAEFTVPGSHKEATVAGFGAVLVDVDLSHKTTLTFYADSGCIIAQEDAKALKDGLSFVGLVSQSEKFP------IAKVEVELGTKAIEDTSRRGRT----DFVVMDDFLYSEP 262          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A1X6PCP8_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PCP8_PORUM)

HSP 1 Score: 172 bits (435), Expect = 2.960e-49
Identity = 106/243 (43.62%), Postives = 138/243 (56.79%), Query Frame = 0
Query:   25 PNYRTKVLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPE---DDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDA-AKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEPM 263
            P+ R +        A  + +  + +   LG +DNG+ P P   G+RSINWDA  VPF+MPGDFFNT V RGAVF ++GG+F VSNP  PP +   D+RF+SL       Q + FS  RLFTP+  N +   F++P  R A A  +GFGAV  DVD    T + Y+D +G R+AKV  P K  GLSF GLV           PV++ V++ LGN  +      H     RDVVV DD  YGEP+
Sbjct:   28 PHLRARAFHARGAAAGDIKATFDKFSAALG-DDNGSGP-PARDGRRSINWDADGVPFDMPGDFFNTAVPRGAVFHAKGGEFRVSNP--PPVQHIVDNRFTSLNKKLAV-QLKPFSAPRLFTPLRDNVVEVRFEVPGKRGAKATTAGFGAVLLDVDRKDVTSLAYYDVHGRRLAKVAAPAKAGGLSFVGLVF--------NKPVVAYVRMTLGNAKVTDRDEGH-----RDVVVADDFVYGEPV 252          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A1X6PFH7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFH7_PORUM)

HSP 1 Score: 171 bits (433), Expect = 5.420e-49
Identity = 107/240 (44.58%), Postives = 138/240 (57.50%), Query Frame = 0
Query:   28 RTKVLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPE---DDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDA-AKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEPM 263
            R K +  +   A  +    + +  LLG +DNG+ P P   G+RSINWDA  VPF+MPGDFFNT V RGAVF ++GG+F VSNP  PP +   D+RFSSL  A ++ Q   FS  RLFTP+  N +   F++P  R   A   GFGAV  DVD  R T + YFDE G  +AKV  P    GLSF G++           P+++ V++ LGN  I        +R  RDVVV DD  YGEP+
Sbjct:   30 RFKTIRASGRAAADIKDDFDRFSELLG-DDNGSGP-PARRGRRSINWDADGVPFDMPGDFFNTNVPRGAVFHAKGGEFRVSNP--PPVQRIVDNRFSSLNKA-LSLQLLPFSAPRLFTPLRDNVMEVRFEVPGKRGRKATTKGFGAVLLDVDRERLTTLEYFDERGRELAKVAAPAAGGGLSFVGVIF--------DRPIVASVRMTLGNTEIA-------KRDGRDVVVADDFVYGEPV 249          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A8J7IWY8_9CYAN (PEP-CTERM sorting domain-containing protein n=1 Tax=Lusitaniella coriacea LEGE 07157 TaxID=945747 RepID=A0A8J7IWY8_9CYAN)

HSP 1 Score: 167 bits (423), Expect = 4.420e-47
Identity = 102/228 (44.74%), Postives = 131/228 (57.46%), Query Frame = 0
Query:   38 DADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKS-RGGKFAVSNPASPPPE--DDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDAAKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEP 262
            D+  +   V+ ++  LG  +NGN PG    G+R INWDAGIVPF+MP DFFN  VTRGA F +  G +F VSNP+   P+  D++F SL P + + +F  FS  RLFTP+ +N +   F +P +   A VSGFGAVFTDVDLP  T + YFD  G  +A   V P  +GLSF G+            P++  VKI LGN  I             DVVV+DD  YGEP
Sbjct:   40 DSGNIGDTVDAFRAALGDPNNGNAPGSFSVGRREINWDAGIVPFDMPPDFFNKTVTRGAEFSTDAGNEFGVSNPSVGDPDFPDNKFDSLNPTY-SGEFMTFSDPRLFTPLGTNVMETNFFVPGSDMPAAVSGFGAVFTDVDLPDITKIEYFDIQGNLLASEFVDPDPQGLSFLGVSF--------DAPILFNVKITLGNTPIGS---NDDPGNNVDVVVLDDFIYGEP 255          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A1X6P166_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P166_PORUM)

HSP 1 Score: 165 bits (417), Expect = 1.440e-46
Identity = 101/244 (41.39%), Postives = 134/244 (54.92%), Query Frame = 0
Query:   25 PNYRTKVLTHTAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPP----EDDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDAAKVS-GFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEPM 263
            P    +    +   A  +    + +   LG +DNG+ P P   G+RSINWDA  VPF+MPGDFFNT V RGAVF ++ G+F VSN   PPP    +D+RF+SL       Q + FS  RLFTP+  N +   F++P  R     S GFGAV  DVD    T + Y+D +G ++AKV  P K  GLSF GL+           PV+++V++ LGN  +      H     RDVVV DD  YGEP+
Sbjct:   27 PRVHARAFHASGAAASDIKGTFDKFSAALG-DDNGSGP-PAHDGRRSINWDADGVPFDMPGDFFNTAVPRGAVFHAKDGEFRVSN---PPPVQHIDDNRFTSLNKKLAV-QLKPFSAPRLFTPLRDNVVDVRFEVPGKRGTKATSAGFGAVLLDVDQKHVTSLAYYDVHGKQLAKVAAPAKAGGLSFVGLIF--------DRPVVARVRMVLGNAKVTDHDDGH-----RDVVVADDFVYGEPV 251          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A1X6P3Q7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3Q7_PORUM)

HSP 1 Score: 164 bits (416), Expect = 2.470e-46
Identity = 101/229 (44.10%), Postives = 136/229 (59.39%), Query Frame = 0
Query:   39 ADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPE---DDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDA-AKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRDVVVMDDLFYGEPM 263
            A  +   V+ +   LG +DNG+ P P   G+RSINWDA  VPF+MPGDFFNT V RGAVF ++GG+F VSNP  PP +   D++F+SL    ++ Q + FS  RLFTP+  N +   F++P  R A A   GFGAV  DVDL   T + Y+D  G R+AK+ VP K  GLSF GL+  +         +++ V++ LGN  +      H     RDVVV D+  YGEP+
Sbjct:   48 AGDIKGAVDRFSTALG-DDNGSGP-PARGGRRSINWDADGVPFDMPGDFFNTAVPRGAVFHAKGGEFRVSNP--PPVQHIVDNQFTSLNKN-LSVQLKPFSAPRLFTPLRDNVVEVRFEVPGKRGATAATKGFGAVLLDVDLEHVTTLAYYDVQGRRLAKMMVPAKAGGLSFLGLLFNEL--------IVAYVRMTLGNAKVTDRDGGH-----RDVVVADNFVYGEPV 258          
BLAST of Gcaud8423.t1 vs. uniprot
Match: A0A7S3E7F1_9RHOD (Hypothetical protein (Fragment) n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7F1_9RHOD)

HSP 1 Score: 161 bits (408), Expect = 1.520e-45
Identity = 90/191 (47.12%), Postives = 113/191 (59.16%), Query Frame = 0
Query:   25 PNYRTKVLTH-TAHDADGLTSVVEDYKNLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKSRGGKFAVSNPASPPPEDDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLVATFQIPATRDAAKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPKNKGLSFAGLVVVDP 214
            PN+RT  +TH  +H+A GLT+  E +K +LGG+DNG++ GPL  G RSINWDA IVPF  P  FF   VTRG    S+  KF VSNP+     DD+FS++     +K+F  FS +RLFTP+  N     F +P  +  A V GFGAVF  VDL + T M  +D N C IA   V  K  GLSF G     P
Sbjct:   35 PNFRT--ITHGQSHNAKGLTTSFEYFKEILGGKDNGSSFGPLEKGHRSINWDAPIVPFEFPRKFFEETVTRGLAVASKNNKFRVSNPSPNTIGDDKFSTINRR-ESKKFLTFSPKRLFTPIKDNEFWIRFTVPGKKTKALVRGFGAVFVGVDLEKVTKMTAYDINDCVIASEYVEAKRNGLSFLGFYFEKP 222          
The following BLAST results are available for this feature:
BLAST of Gcaud8423.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IC14_9FLOR1.280e-12168.63Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
R7QFM2_CHOCR2.150e-7151.69Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A6T6AU01_9RHOD8.540e-5345.42Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
B7G045_PHATC3.720e-5044.02Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A1X6PCP8_PORUM2.960e-4943.62Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
A0A1X6PFH7_PORUM5.420e-4944.58Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A8J7IWY8_9CYAN4.420e-4744.74PEP-CTERM sorting domain-containing protein n=1 Ta... [more]
A0A1X6P166_PORUM1.440e-4641.39Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
A0A1X6P3Q7_PORUM2.470e-4644.10Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3E7F1_9RHOD1.520e-4547.12Hypothetical protein (Fragment) n=3 Tax=Rhodosorus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1630_length_9372_cov_4.968538contigNODE_1630_length_9372_cov_4.968538:5651..6445 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8423.t1Gcaud8423.t1Gracilaria caudata M_176_S67 malemRNANODE_1630_length_9372_cov_4.968538 5651..6445 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8423.t1 ID=Gcaud8423.t1|Name=Gcaud8423.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=265bp
MKYLIYLLSLSALLAYALASNKHCPNYRTKVLTHTAHDADGLTSVVEDYK
NLLGGEDNGNNPGPLPSGQRSINWDAGIVPFNMPGDFFNTVVTRGAVFKS
RGGKFAVSNPASPPPEDDRFSSLLPAFVTKQFRRFSLERLFTPVLSNRLV
ATFQIPATRDAAKVSGFGAVFTDVDLPRRTHMVYFDENGCRIAKVQVPPK
NKGLSFAGLVVVDPHNPKKTLPVISKVKIQLGNVSIRGFFRRHFRRFFRD
VVVMDDLFYGEPMH*
back to top