Gcaud8254.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8254.t1
Unique NameGcaud8254.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length257
Homology
BLAST of Gcaud8254.t1 vs. uniprot
Match: A0A2V3J7Z8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7Z8_9FLOR)

HSP 1 Score: 370 bits (949), Expect = 1.450e-126
Identity = 183/258 (70.93%), Postives = 210/258 (81.40%), Query Frame = 0
Query:    1 MGYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKGIPGSAADAVLGRDQKGRVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFAPGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGLDEKYLLCLDGALDAAYARLQDIADPMMFTPYGEPQTEIPGQPFTPSVGAMDFQTTAGEKINFWKT--ESSADTP-YKRPSGANTPELPYNVSPTVDEMKEAQKARGIL 255
            MGYGDYSY TDKTKGHVNQYYVDKFRIA+DFSKG+P S +DA LGRDQKGRV+VP +GI Q  D  +P RD    PDPRIAEAEG ++ WDP YVDPKF+PGT+ +C+  AVA+DAFQKFR+SV EQR + LT MDFGAV RK+RIRAGLDEKYLLCLDG+LD  YA LQDIADP  FTP GEPQTEIPGQP+T SVGAMDF  T GE+I FWK       D P +K+PSG++TPELPYNVS TVD++K+AQKAR I+
Sbjct:   41 MGYGDYSYLTDKTKGHVNQYYVDKFRIASDFSKGVPASLSDAKLGRDQKGRVIVPEKGIPQAFDSPIPERDATAPPDPRIAEAEGAVFAWDPAYVDPKFSPGTYENCEDPAVAEDAFQKFRASVNEQRGAVLTRMDFGAVERKKRIRAGLDEKYLLCLDGSLDVRYAVLQDIADPPTFTPTGEPQTEIPGQPYTGSVGAMDFMLTPGEEIAFWKQLQAKGVDEPVFKKPSGSDTPELPYNVSATVDQLKDAQKARDII 298          
BLAST of Gcaud8254.t1 vs. uniprot
Match: R7Q7D7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7D7_CHOCR)

HSP 1 Score: 319 bits (818), Expect = 1.100e-106
Identity = 159/256 (62.11%), Postives = 188/256 (73.44%), Query Frame = 0
Query:    1 MGYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKGIPGSAADAVLGRDQKGRVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFAPGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGLDEKYLLCLDGALDAAYARLQDIADPMMFTPYGEPQTEIPGQPFTPSVGAMDFQTTAGEKINFWKTESSADTPYKRPSGANTPELPYNVSPTVDEMKEAQKARGILP 256
            MGYGDYSYSTDKT+GH  QYY+DKFRI +DF +G+P  A+  +LGR   G V VP +GI Q  DPALP  DE   PDPR+ EA G LYPWD +YVDP++   TFA+   D +AD +FQ+FR+SV+E R  ALTAMDFGA AR +RI  G+DEK LL LDGALD  YARLQ I++P    P G PQTEIPG P+  SVGAMDF    GEK+ FWKT+  AD PYKRPSGA+TPELPYN SP V E++E Q ARG+LP
Sbjct:   41 MGYGDYSYSTDKTRGHAMQYYIDKFRIVSDFGRGVPLYASTPMLGRGIMGGVEVPKEGIKQVFDPALPTSDEPTAPDPRLVEASG-LYPWDSDYVDPEWRADTFANMSDDEIADQSFQEFRASVSESRGMALTAMDFGATARVERIIGGIDEKELLTLDGALDVNYARLQKISNPATLNPTGSPQTEIPGIPYLTSVGAMDFIEKPGEKVAFWKTDKPADLPYKRPSGADTPELPYNASPDVAEIQEGQAARGLLP 295          
BLAST of Gcaud8254.t1 vs. uniprot
Match: A0A291FEB5_GRIPA (LRC5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB5_GRIPA)

HSP 1 Score: 302 bits (773), Expect = 1.000e-99
Identity = 153/253 (60.47%), Postives = 182/253 (71.94%), Query Frame = 0
Query:    1 MGYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKGIPGSAADAVLGRDQKGRVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFAPGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGLDEKYLLCLDGALDAAYARLQDIADPMMFTPYGEPQTEIPGQPFTPSVGAMDFQTTAGEKINFWKT-ESSADTPYKRPSGANTPELPYNVSPTVDEMKEAQKAR 252
            MGYG YSY TDKTKGHVNQYYVDKFRIA+D++KG P + ADAVLGR  KG VLVP++GI Q  DPA+ PRD  V PDPRIAE+EG +YPWD NY DP+F P  ++D +     D +F  FRSS+ E R  +LTA DFGAVAR QRI+ GLDEKYL+ LDG LDA YAR Q IA+P + +P G P TEIPG P+  SVGAMDF     E + FWK+  S+    YKRPSGA TP LPYN +  V  + EAQ+A+
Sbjct:   43 MGYGAYSYITDKTKGHVNQYYVDKFRIASDWTKGTPKTQADAVLGRTFKGAVLVPTEGIPQEFDPAIAPRDNTVDPDPRIAESEGEVYPWDINYFDPQFLPSAYSDVNDPETVDSSFADFRSSMWESRRESLTAQDFGAVARVQRIKNGLDEKYLMTLDGMLDARYARFQKIAEPAVLSPTGTPMTEIPGTPYLGSVGAMDFIAQEEESVAFWKSGPSTTPVNYKRPSGAQTPNLPYNTAAPVAAINEAQEAQ 295          
BLAST of Gcaud8254.t1 vs. uniprot
Match: A0A1X6NU69_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU69_PORUM)

HSP 1 Score: 233 bits (593), Expect = 1.950e-72
Identity = 131/268 (48.88%), Postives = 158/268 (58.96%), Query Frame = 0
Query:    1 MGYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKGIPGSAADAVLGRDQKGRVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFAPGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGLDEKYLLCLDGALDAAYARLQDIADPMMFTPYGEPQTEIPGQPFTPSVGAMDFQ------------TTAGEKIN-FWKTESSADTPYKRPSGANTPELPYNVSPTVDEMKEAQKARGIL 255
            MGYGDYSY TD TKGHV QYYVDKFR A+DFS+G+P SAAD +LGR  KG V VP++GI Q T+  L P   D   DPR+AEAEG ++ WD  YVDP  +     D + +AVAD AF  FR S+   R +AL        A   R+   + EK LL LDG LDA Y+RLQ I +    TPYG PQTEIPG+P+  SVGA+DF               AG  +  FWK        YKRP GA TPE  YN SP V  +    ++ GI+
Sbjct:   43 MGYGDYSYLTDATKGHVGQYYVDKFRRASDFSRGVPASAADGLLGRTAKGAVAVPAEGIPQLTEGPLAP-SPDAAADPRVAEAEGTVWSWDAGYVDPSLS--AVEDTNDEAVADRAFAAFRGSMESTRGAALARSSKALEATVTRLSGTIGEKALLTLDGQLDAEYSRLQKIKNHPRLTPYGRPQTEIPGRPYVGSVGALDFAKGPGGEPATTAVVAAGNGVGAFWKEPEQPQPTYKRPLGAATPERIYNASPDVARLTSTAESAGIV 307          
BLAST of Gcaud8254.t1 vs. uniprot
Match: A0A5J4Z2M2_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2M2_PORPP)

HSP 1 Score: 199 bits (507), Expect = 9.240e-60
Identity = 117/250 (46.80%), Postives = 147/250 (58.80%), Query Frame = 0
Query:    2 GYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKG--IPGSAADAVLGRDQKGRVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFAPGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGL--DEKYLLCLDGALDAAYARLQDIADPMMFTPYGEPQTEIPGQPFTPSVGAMDFQ-------TTAGEKINFWKTESSADTPYKRPSGANTPELPYNVSP 240
            GYGDYSYSTD+TKGHVNQYYVDK R  +D+     +P S  DAVLGR  KG V VP  GI Q  DP L    + ++ DPRIAEA+G ++ WD  +VD      + AD   +AVAD+AF KFR SV  +R + +T  +    +    +R GL   E  LL   G   A  A  + IA    +T  G+PQTEIPG+PF  S+GAMD+          A +   FWK ++  + PYKRP GANTPELPYN  P
Sbjct:   28 GYGDYSYSTDRTKGHVNQYYVDKARSRSDWGNRNVLPASEGDAVLGRTAKGAVAVPEFGIPQLDDPVLGFGPDSMV-DPRIAEADGAVWRWDAGFVDESMTLASCADISDEAVADEAFAKFRGSVLAERGAMITKAESATASVITSLRDGLYSGEAQLLTASGQRLANVAGQEKIATISGYTWDGQPQTEIPGKPFVKSIGAMDYMDGVEGGDVVAAKVGAFWKPKAPKEVPYKRPMGANTPELPYNTVP 276          
BLAST of Gcaud8254.t1 vs. uniprot
Match: A0A1X6NJT7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJT7_PORUM)

HSP 1 Score: 152 bits (383), Expect = 4.100e-41
Identity = 88/208 (42.31%), Postives = 120/208 (57.69%), Query Frame = 0
Query:    1 MGYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKGIPGSAADAVLGRDQKGRVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFAPGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGLDEKYLLCLDGALDAAYARLQDIAD-PMMFTPYGEPQTEIPGQPFTPSVGAMDFQTTAG 207
            MGYGDYS  TD+TK  V  YY DKFR A+DF++G+  + A A+ GR  KG ++VP QG+ Q  D  L  R +    DPR+AEA+G ++ WD NY +P +   T AD +S    + AF  FR++ A  R + L A D    A   ++   L E + L L+G     YARLQ I + PM     G+PQTE+PG  +  S+GA DF+   G
Sbjct:   38 MGYGDYSILTDETKAPVGNYYADKFRRASDFTRGVALTDASAMYGRSAKGAIVVPKQGVPQELDEGLA-RIDGAPDDPRVAEADGAVWSWDANYDNPNYKGMTEADQES--AEEAAFASFRAACATDRAATLAASDRVTDATVAKLAGDLSEGFKLTLEGQHAVEYARLQKIKNHPMTAGVEGKPQTEVPGTAYLASIGAADFEGKKG 242          
The following BLAST results are available for this feature:
BLAST of Gcaud8254.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J7Z8_9FLOR1.450e-12670.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7D7_CHOCR1.100e-10662.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A291FEB5_GRIPA1.000e-9960.47LRC5 n=1 Tax=Griffithsia pacifica TaxID=35689 RepI... [more]
A0A1X6NU69_PORUM1.950e-7248.88Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z2M2_PORPP9.240e-6046.80Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A1X6NJT7_PORUM4.100e-4142.31Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1514_length_10049_cov_4.962442contigNODE_1514_length_10049_cov_4.962442:5413..6183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8254.t1Gcaud8254.t1Gracilaria caudata M_176_S67 malemRNANODE_1514_length_10049_cov_4.962442 5413..6183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8254.t1 ID=Gcaud8254.t1|Name=Gcaud8254.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=257bp
MGYGDYSYSTDKTKGHVNQYYVDKFRIATDFSKGIPGSAADAVLGRDQKG
RVLVPSQGISQPTDPALPPRDEDVIPDPRIAEAEGVLYPWDPNYVDPKFA
PGTFADCDSDAVADDAFQKFRSSVAEQRTSALTAMDFGAVARKQRIRAGL
DEKYLLCLDGALDAAYARLQDIADPMMFTPYGEPQTEIPGQPFTPSVGAM
DFQTTAGEKINFWKTESSADTPYKRPSGANTPELPYNVSPTVDEMKEAQK
ARGILP*
back to top