Gcaud3256.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A2V3IV77_9FLOR (Putative RNA-binding protein EIF1AD n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV77_9FLOR) HSP 1 Score: 142 bits (359), Expect = 5.090e-36 Identity = 83/163 (50.92%), Postives = 101/163 (61.96%), Query Frame = 0
Query: 444 MTAPGKRRQRVQLLSEQPTLLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHAEARSRIGGEIETIVLSTFLSSISKEEFWPERFRRAPEIDGREKTADSETIEKEEEE-----STDDDTEEGWNIGEGNPNRSGWEHQPSS 601
MT PG RR+R QLLSE P L GQ VAQI +ALGENTY+V L G L RLPKRLR VAYIRR SFVFVR+HAEAR R+ G+IE +VL FL ++ KE FWP F ++++E + S+D E+ W +G+GNPNR H SS
Sbjct: 1 MTTPGNRRRRTQLLSELPALKPGQQVAQITRALGENTYEVRLEGGHLQLVRLPKRLRDVAYIRRDSFVFVREHAEARGRVVGDIELVVLPAFLPALRKEHFWPAAFH-------------PHRLKRDEHDVPVHDSSDSAEEDDWQLGQGNPNRRMLSHMASS 150
BLAST of Gcaud3256.t1 vs. uniprot
Match: R7QD95_CHOCR (S1-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD95_CHOCR) HSP 1 Score: 113 bits (283), Expect = 1.130e-25 Identity = 76/170 (44.71%), Postives = 100/170 (58.82%), Query Frame = 0
Query: 450 RRQRVQLLSEQPTLLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHAEARS-RIGGEIETIVLSTFLSSISKEEFWPERFRRAPEIDGREKTADSETIEKE------EEESTDDDTEEGWNIGEGNPNRSGWEHQPSSSGESSSDEEDD 612
RR+++Q LSE P L +GQ VA+++ A GEN Y+V G +LY+LPKR+R V +IRRGS+VFV+D + R+ G+IE +VL+ FL ISKE +WP F+ + T D I E EEE D E W IG GNPNR+ W+ Q SSDEE D
Sbjct: 6 RRKQLQALSEPPVLEEGQKVARVIAACGENNYEVEDEHGAKTLYQLPKRMRHVVFIRRGSYVFVKDDETRKDGRVRGDIEVVVLTHFLHGISKEPYWPRSFKGEED-----NTEDMPAIVSEGAGGNSEEEPGHGD--EQWEIGSGNPNRAQWQDQ-------SSDEESD 161
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A1U8QRY5_EMENI (S1-like domain-containing protein n=3 Tax=Aspergillus TaxID=5052 RepID=A0A1U8QRY5_EMENI) HSP 1 Score: 58.5 bits (140), Expect = 1.070e-6 Identity = 34/95 (35.79%), Postives = 54/95 (56.84%), Query Frame = 0
Query: 463 LLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHA-EAR-SRIGGEIETIVLSTFLSSISKEEFWPERFRRAPEI 555
L QGQ +A++++A G N Y V +T+L LP + R +++RGSFV V +A E R +++ GEI IV + K +WP+ F + P +
Sbjct: 22 LAQGQEIARVIKATGNNIYSVQFPSKKTALVELPAKFRSTIWMKRGSFVVVDTNALETRDNKLEGEIVNIVRDE--KAWRKTHYWPKEFVKQPVV 114
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A059JET0_TRIIM (S1-like domain-containing protein n=10 Tax=Arthrodermataceae TaxID=34384 RepID=A0A059JET0_TRIIM) HSP 1 Score: 57.8 bits (138), Expect = 1.990e-6 Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 0
Query: 448 GKRRQRVQLLSEQ----PTLLQ-GQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHA--EARSRIGGEIETIVLSTFLSSISKEEFWPERF 549
GK R+++ +E+ PT L+ GQ +A++V+A G N Y V L + L LP R R +++RG+FV V A E +++ GEI IV + K +FWP+ F
Sbjct: 2 GKPRRKMLATAEETLYPPTALEEGQSIARVVKATGNNVYSVELPSKESILVELPARFRSTIWMKRGTFVVVDSTALEERDNKLSGEIVNIVRDD--KAWRKADFWPKEF 108
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A4X3P758_PRIPA (Probable RNA-binding protein EIF1AD n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A4X3P758_PRIPA) HSP 1 Score: 59.3 bits (142), Expect = 2.250e-6 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 0
Query: 444 MTAPGKRRQRVQLLSEQPTL-LQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHAEARSRIGGEIETIVLSTFLSSISKEEFWPERFRRAPEIDGRE 559
M+ KRR + L + L ++G +AQ+V A G N ++VL G T L +P + R+ +IR+G FV VR E ++ EIE ++ + + I ++ WP+RF ++ RE
Sbjct: 1 MSVASKRRYMMNKLDYEMYLPVEGDSIAQVVGARGNNLHEVLEESGETYLVSMPSKFRKSVWIRKGQFVVVRPIEEG-DKVRAEIEHVLDAENVLYIREQNKWPQRFEAEAKLLTRE 116
BLAST of Gcaud3256.t1 vs. uniprot
Match: A1CBE5_ASPCL (Eukaryotic initiation factor 1A, putative n=1 Tax=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) TaxID=344612 RepID=A1CBE5_ASPCL) HSP 1 Score: 57.0 bits (136), Expect = 4.040e-6 Identity = 34/93 (36.56%), Postives = 53/93 (56.99%), Query Frame = 0
Query: 463 LLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHA-EAR-SRIGGEIETIVLSTFLSSISKEEFWPERFRRAP 553
L +GQ +A++++A G N Y + L +T L LP R R +++R S+V V +A E R +++GGEI IV + K FWP+ F + P
Sbjct: 22 LAEGQEIARVIKATGNNVYLIELSSKKTMLVELPARFRSTIWMKRRSYVVVDMNALEGRDNKLGGEIINIVRDE--KAWRKAPFWPKEFVKQP 112
BLAST of Gcaud3256.t1 vs. uniprot
Match: R7YGC9_CONA1 (S1-like domain-containing protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7YGC9_CONA1) HSP 1 Score: 56.6 bits (135), Expect = 5.150e-6 Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 0
Query: 462 TLLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHAEA--RSRIGGEIETIVLSTFLSSISKEEFWPERFRR 551
TL +GQ +A++ +A G N Y V L G+ L LP R R +I+RGS+V V A A +++ GEI IV K+ +WP +F +
Sbjct: 21 TLAEGQTLARVTKATGNNLYSVELPSGQPVLVELPARFRSTIWIKRGSYVLVDTGALADRENKLDGEIINIVRDE--KEWRKQSYWPAQFAK 110
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A4U0XJ46_9PEZI (S1-like domain-containing protein n=2 Tax=Cryomyces minteri TaxID=331657 RepID=A0A4U0XJ46_9PEZI) HSP 1 Score: 56.6 bits (135), Expect = 5.260e-6 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 0
Query: 463 LLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHAEAR--SRIGGEIETIVLSTFLSSISKEEFWPERFRRAP 553
L GQ VA++V+A G N Y V L GR+ L LP R R +I+RG ++ V +A A +++ GE+ +V K +WP F + P
Sbjct: 22 LSDGQSVAKVVKAAGNNLYNVELPSGRSILVELPARFRSTIWIKRGGYLLVDTNALAARDNKLDGEVLNVVRDE--KQWRKMSYWPAEFAKKP 112
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A5N6TIP0_9EURO (Nucleic acid-binding protein n=1 Tax=Aspergillus avenaceus TaxID=36643 RepID=A0A5N6TIP0_9EURO) HSP 1 Score: 56.2 bits (134), Expect = 7.010e-6 Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0
Query: 463 LLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHA-EAR-SRIGGEIETIVLSTFLSSISKEEFWPERFRRAP 553
L QGQ +A++++A G N Y V L T L LP R R +++RGS+V + +A E R +++ GEI IV + K FWP++F + P
Sbjct: 22 LQQGQQIARVIKATGNNIYAVELPSKDTILVELPSRFRSTIWMKRGSYVVIDTNALEGRDNKLVGEIINIVRDE--KAWRKAPFWPKQFVKQP 112
BLAST of Gcaud3256.t1 vs. uniprot
Match: A0A6A6QN46_9PEZI (Nucleic acid-binding protein n=2 Tax=Mytilinidiaceae TaxID=281242 RepID=A0A6A6QN46_9PEZI) HSP 1 Score: 56.2 bits (134), Expect = 7.170e-6 Identity = 34/97 (35.05%), Postives = 52/97 (53.61%), Query Frame = 0
Query: 457 LSEQPTLLQGQHVAQIVQALGENTYQVLLGDGRTSLYRLPKRLRQVAYIRRGSFVFVRDHAEA--RSRIGGEIETIVLSTFLSSISKEEFWPERFRR 551
L+ TL +G+ +A+IV+A G N Y L + L LP R R +I+RGSFV V A A +++ GEI +V + K+++WP F +
Sbjct: 16 LTPPDTLTEGESIARIVKAAGNNLYNAELPSSQAILVELPARFRSTIWIKRGSFVLVDTTALADRENKLDGEIINVVRDE--RAWRKQKYWPAEFAK 110 The following BLAST results are available for this feature:
BLAST of Gcaud3256.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud3256.t1 ID=Gcaud3256.t1|Name=Gcaud3256.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=614bpback to top |