Gcaud2499.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2499.t1
Unique NameGcaud2499.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length267
Homology
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BLAST of Gcaud2499.t1 vs. uniprot
Match: A0A2V3IHQ8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHQ8_9FLOR)

HSP 1 Score: 176 bits (446), Expect = 1.400e-50
Identity = 137/273 (50.18%), Postives = 179/273 (65.57%), Query Frame = 0 
Query:    1 MNHARVLRTG-----SQLARVLQPGPRFPRGLRFYTSKPSAPDSEQVLYEEYVTPDGGSYRLDYDAQKKFKADDWQKFERAFGLDQTPTDEEIDEWVEANSEDWEVVHIPADLKNP--TDAVEADAFPV-VDKFDEFEXXXXXXXXXXXXXXXXXXXXXXXXXXXAIRALRLSKEMEVAAVHALDADGGGREGGLEIYRTRLSENLRDLTIVFRSESEDMEPYYEEMGRKVKAEIARRVNTKFIPKVWFRRAEEEDEKRMELERLFERIARER 265
            MN   V+R       S+ AR L+P         F T+K      E VLYE+Y TP GG+YRL ++A ++F   +W+ FE+ FGLD+TP+DEEID WVE  + D  VV + ++ +N    D       P  V       XXXXXXXXXXXXXXXXXXXXXXXXXXX         EME+AA+ ALD DGGG E G+EI   RLS+NLRDLTIV+RS   ++E  Y+EMG+++K+EIA  + T+FIP VWF++AEEED++  +L+R+FE+IARER
Sbjct:    1 MNRMHVMRLARYVGHSRCARRLRP-----HHSSFCTNKKPTEPEEHVLYEDYKTPSGGTYRLPFNAHERFTGAEWEGFEKTFGLDKTPSDEEIDAWVEKTAIDSHVVTLSSEPRNTWNNDVETKIGEPSEVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEMAALRALDGDGGGGEDGVEICDARLSDNLRDLTIVYRSNISEIEKQYDEMGKRIKSEIANSMRTRFIPNVWFKKAEEEDQRLEQLQRMFEQIARER 268
The following BLAST results are available for this feature:
BLAST of Gcaud2499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHQ8_9FLOR1.400e-5050.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 244..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1317_length_11484_cov_3.708769contigNODE_1317_length_11484_cov_3.708769:7924..8724 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2499.t1Gcaud2499.t1Gracilaria caudata M_176_S67 malemRNANODE_1317_length_11484_cov_3.708769 7924..8724 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2499.t1 ID=Gcaud2499.t1|Name=Gcaud2499.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=267bp
MNHARVLRTGSQLARVLQPGPRFPRGLRFYTSKPSAPDSEQVLYEEYVTP
DGGSYRLDYDAQKKFKADDWQKFERAFGLDQTPTDEEIDEWVEANSEDWE
VVHIPADLKNPTDAVEADAFPVVDKFDEFEKPVRSMREFRQLEMFKSQKR
DDKKQKQAIRALRLSKEMEVAAVHALDADGGGREGGLEIYRTRLSENLRD
LTIVFRSESEDMEPYYEEMGRKVKAEIARRVNTKFIPKVWFRRAEEEDEK
RMELERLFERIARERG*
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