Gcaud9488.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9488.t2
Unique NameGcaud9488.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length799
Homology
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A2V3J5U4_9FLOR (ERAD-associated E3 ubiquitin-protein ligase HRD1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5U4_9FLOR)

HSP 1 Score: 644 bits (1662), Expect = 3.110e-218
Identity = 439/726 (60.47%), Postives = 499/726 (68.73%), Query Frame = 0
Query:    1 MPNVASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGA-RNQERSAXXXXXXXXXXXXXXXGAQPQXXXXXXXAAHIGPLAAQQ---NQQPPRQQAGQNGAQNANIGEAGARLLNFANQWINQVMNDAGIRPQ----ANAQNQNVPNANXXXXXXXXXXXXXXXXXXXXXXXXXMLQARIRQAAQQRVQHILRQNPHAFLNYQGVAGPNAIAHMQLRARRRGALNGLRQ-YPAGYRVNLPPRNNGVHAMNNAQNENANVATAGNPPTNGAPDQGGTHGAASASNEPNAAQQGVVGSSXXXXXXXXXTASNAFASSEGTGVRAAQAGSSGASAIRIDSHTQRAGELDQTATASAAMHTGLASQLG-----------PGAGAHTLPLERLFEIQRQIEVLRSEVQSLVLHATEAQLHAMERDEQ 706
            +P + SF+ Y FFS+ LSAAVL+HA+Y+K+FFYRTVVYLS SKLAIM  ANMALVSILL+WR+ QLIFLGPLRFRELERL  RARD IIEYCFAISVFRDDFN  FVAL+MTVLLLKSLHWLAKDRTD+LEEQ   P RTH+RLVGLL+LL  LDCFLA  C+  T  SNGRSMYVLFSFEFTLL IELA+NVFQY+F LIDQRM GRW SKG+F+FYA+LLCD+STLT YI+F +YV +YYSFP+HI+RE YVTLSKFQR+C DFLRYRRVVAN++EVVEEV+EEELQQGDRTCIICREEMESAIKL CGHMFH RCL++WLKRQLSCPTCRATIDV+R A RNQ  ++XXXXXXXXXXX     AQP+ XXXXXX         QQ              N  QN ++GEAGARL NFANQWINQVMN+AGI+ Q    A     N P  N    XXXXXXXXXXXXXXXX      LQ ++   AQ +  H  R +P+AF  Y   AG NAIAHMQLRARRRGAL  L Q Y   YRV LPP NN     N AQ+   N A    P  N           +       A++Q    SSXXXXXXXXX       S       A++     ++A     H  R  E          + +G+   L              A    LPLERLF+IQRQIEVLRSEVQ LVL  TEAQ++ M+   Q
Sbjct:    3 LPFITSFRGYAFFSILLSAAVLTHAVYTKRFFYRTVVYLSHSKLAIMATANMALVSILLVWRIIQLIFLGPLRFRELERLQLRARDAIIEYCFAISVFRDDFNYRFVALVMTVLLLKSLHWLAKDRTDFLEEQPLSPFRTHMRLVGLLILLCSLDCFLAVTCVRITFNSNGRSMYVLFSFEFTLLLIELASNVFQYVFLLIDQRMQGRWESKGLFTFYADLLCDMSTLTFYIIFLVYVHLYYSFPFHILRELYVTLSKFQRRCTDFLRYRRVVANMNEVVEEVTEEELQQGDRTCIICREEMESAIKLACGHMFHPRCLQSWLKRQLSCPTCRATIDVDRSASRNQNDNSXXXXXXXXXXXNQR--AQPENXXXXXXXXXX----LQQIXXXXXXXXXPLHPNAPQNPHLGEAGARLYNFANQWINQVMNEAGIQQQPANGAPPNGANPPPXNARNQXXXXXXXXXXXXXXXXSMHPRTLQQQVAAQAQHQNGH--RLHPNAFPQYPFPAGQNAIAHMQLRARRRGALASLPQAYDQQYRVQLPPLNNLAGHRNRAQDHPTNPAAQTEPEANMESSNTNAQSISDVEQTSTASRQPAPSSSXXXXXXXXXXXXXXXPSQTANRSTASRTAGDRSTA----GHPGRPMEPAPMTQYELGLRSGIQFYLNILRARDQAIAQRAAATRALPLERLFDIQRQIEVLRSEVQDLVLQVTEAQVNTMDNTAQ 716          
BLAST of Gcaud9488.t2 vs. uniprot
Match: R7QRC3_CHOCR (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC3_CHOCR)

HSP 1 Score: 442 bits (1137), Expect = 1.620e-138
Identity = 243/441 (55.10%), Postives = 311/441 (70.52%), Query Frame = 0
Query:    4 VASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGARNQERSAXXXXXXXXXXXXXXXGAQPQXXXXXXXAAHIGPLAAQQNQQPPRQQAGQN--GA----QNANIGEAGARLLNFANQWINQVMNDA--GIRPQANA 436
            + +F+ YVF S+ L+ AV+ HA+Y K FFYR+V+YLS+SK+A++   NMAL S LL+WR+ Q +FLGPLRFRE+ERLH RARD +IE CFAISVFR+D +  FVA  MT+LLLKSLHWL+KDR ++LEEQ   P+RTH+RLVGL+  L  LD FL       TL + G +MYVLF+FE+T++ IEL +++ +Y+F +ID+ M+G W  K ++SFY ELL DL  LT+Y++FFIYVQ +YS P+HIIRE +VT SKF+R+C+DFLRYRRVVA ++++  + +EEEL +GDRTCIICREEM++A KL CGH+FH RCL+NWLKRQLSCPTCRA IDVN G  +Q   A                 Q         A HI       N    R  A  N  GA    Q AN+G+AGARL+N ANQW+NQVM DA  G  P ANA
Sbjct:    2 LTTFRGYVFASMLLTVAVIGHALYLKHFFYRSVIYLSKSKIAVLAVGNMALASALLLWRVLQAVFLGPLRFREVERLHIRARDAVIECCFAISVFREDLDARFVAFFMTLLLLKSLHWLSKDRIEFLEEQPLTPVRTHLRLVGLMSALLVLDIFLVQRFATITLTTEGATMYVLFAFEYTIIVIELLSDIVKYVFLVIDRSMEGHWEEKNMYSFYIELLSDLCQLTVYVLFFIYVQYFYSMPFHIIREVWVTFSKFRRRCSDFLRYRRVVATMNDLFADATEEELVEGDRTCIICREEMQTAKKLACGHLFHARCLQNWLKRQLSCPTCRAVIDVN-GPGSQSPQA-----------------QNPNMNNPLNALHINNPNNINNGFNFRANANMNNNGAVPLNQAANVGDAGARLVNLANQWLNQVMVDARAGGGPGANA 424          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A7S0ZHY2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHY2_9RHOD)

HSP 1 Score: 331 bits (849), Expect = 4.190e-103
Identity = 169/345 (48.99%), Postives = 233/345 (67.54%), Query Frame = 0
Query:    5 ASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGARNQERSA 349
            ASF  YV  S   S  V+ HA   K++FY  VVYL++SK+A +   N  +V +LL+ +  Q +FLGPLRFRE ERL  R R+ +IE C A++VFR++FN+ F+ L   +L LK  HWL++DR +Y+EEQ   PL  H RL+ L+ +L  LD  L   C   T+Q  G S  VLF+FEF +L I L + + +Y     D  ++GRW +KG+ SFY ELLCD S L +YI FF+YVQ +Y+ P HIIR+ Y+T +KF ++C DFLRYRRV ++++E+  + +E++   GDRTCIICREEM+SA KL CGH+FH RCL++WL+RQLSCP CRA ++V+    N    A
Sbjct:    4 ASFGSYVLMSFVSSLLVVIHAFSLKRYFYNAVVYLTKSKIATVVLGNCGVVCLLLVGKFMQAVFLGPLRFREEERLQVRIREAVIESCLAMTVFREEFNSKFIGLFAVLLFLKIFHWLSRDRVEYMEEQPNAPLLAHARLISLMAVLFALDIRLVVSCATYTMQ-YGPSFLVLFAFEFAVLSISLISTITRYGLNSADSYLEGRWDAKGMISFYNELLCDASQLIVYIAFFLYVQAFYTLPLHIIRDIYLTFTKFHKRCVDFLRYRRVASSMNELFPDATEQDFSDGDRTCIICREEMQSAKKLNCGHIFHVRCLQSWLRRQLSCPVCRANVEVSTRGSNTRNEA 347          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A7S1TGM3_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGM3_9RHOD)

HSP 1 Score: 316 bits (809), Expect = 3.070e-93
Identity = 165/338 (48.82%), Postives = 226/338 (66.86%), Query Frame = 0
Query:   14 SVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVF---RDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGARNQERS 348
            S  L  A + +A + K++FY +V YL  SK+A +   N+ L +++L+ ++ Q IFLG LRFRE ERL  R R+ ++E C A+SVF   R DF+  F+  +  +L +K+ HWLAKDR D++EEQ   PLR+H+RL  LL+     D  L    I      N   + VLF+FEFTLLFI ++ N  +YI  LID +MDGRW  +  FSFYAEL+ D+S L +Y+ FF+YV  +YS P HIIR+ Y+T S FQR+C DFLRYR+V+  ++E+    +EEEL   DR CIICRE+M+SA KL CGH+FH RCL++WLKRQ  CPTCRA ID   GA  ++++
Sbjct:   12 SYILGIATVWYAFHLKRWFYNSVGYLVESKVATLILGNVYLATVVLVGKMVQWIFLGQLRFRETERLQIRMREAVVETCLAMSVFKFDRTDFDARFLLFLSILLFMKTFHWLAKDRVDFMEEQPLVPLRSHLRLTFLLLXXXXXDLVLLYWSIIYGALRNQYPILVLFTFEFTLLFITISWNAVRYILLLIDLKMDGRWDDRSTFSFYAELVADVSQLLVYMAFFVYVLFHYSLPLHIIRDIYITFSNFQRRCNDFLRYRKVLNEMNELFPNATEEELDAADRVCIICREDMQSAKKLNCGHLFHPRCLQSWLKRQRICPTCRAAIDFRGGAARRDQA 349          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A1X6NM01_PORUM (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM01_PORUM)

HSP 1 Score: 311 bits (796), Expect = 1.300e-89
Identity = 159/337 (47.18%), Postives = 229/337 (67.95%), Query Frame = 0
Query:    6 SFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGA 342
            +F  Y+  S+ ++AAV  HA Y  ++ YRT+V+L  SK A +   NM L ++L+  +  Q +FLG LRFRE+ERL+ R R+ +IE C A++VFRDDFNT F+ +   +L LK  HWLAKDR ++LEEQ   P  T++RL+ L+++L  +D  L   C+  TL+  G +M  LF+FEFT+L IEL +++ ++   ++D    GRW  K + +FYAEL+ D   L +Y+ FF++V  +Y  P HI+R+ YV  ++ QR+  DF+RYRRVVA + ++  + + EEL   D TCIICREEM +A KL CGH+FH RCL++WLKRQLSCPTCRA +DV+  A
Sbjct:    4 TFPSYLALSMAVTAAVCGHATYMHRYLYRTMVHLESSKFATLALGNMLLATVLVAGKTVQRLFLGSLRFREVERLYLRIREAVIETCLAMTVFRDDFNTNFILMFGMLLFLKVFHWLAKDRIEFLEEQPLSPRSTYVRLLCLMLMLFSVDARLLIACLHYTLE-YGHTMVALFAFEFTVLLIELCSHIVRFTLHVVDVACAGRWEGKAMVAFYAELVADALQLVVYVAFFVHVLTFYPLPIHILRDLYVAATRLQRRVFDFMRYRRVVATMSQLFADATPEELAAADATCIICREEMVAAKKLACGHIFHARCLQSWLKRQLSCPTCRAPVDVSPSA 339          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A5J4YLY9_PORPP (ERAD-associated E3 ubiquitin-protein ligase HRD1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLY9_PORPP)

HSP 1 Score: 303 bits (777), Expect = 2.300e-89
Identity = 148/320 (46.25%), Postives = 226/320 (70.62%), Query Frame = 0
Query:   21 VLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESA--IKLGCGHMFHRRCLENWLKRQLSCPTCRATIDV 338
            V+ +A ++K++FY + V+L+RSK++ +   N  + S+L++ ++ Q +FLGPLRFRE ERL  R RD +IE C A++VFRD+F+  F  +   +L +K  HWL++DR + +EEQL  P+RTH++LV L+++L   D ++   CI  T+ + G SM VLF+FEF +L + L + + +Y F +ID R DG W +KG+ SFY EL+ D   L +YI FF+YVQ +Y+ P HIIR+ Y+T +KFQ++ +DF+RYR+V + ++E+  E +EE+ +Q DR CIICR+EM ++   KLGC H+FH  CL+ WL+RQL+CP CR  I+V
Sbjct:   19 VVVYAFHTKRYFYASTVFLARSKVSTLALTNAIVASVLVLGKVIQSVFLGPLRFREQERLQIRVRDAVIETCLAMTVFRDEFDAKFFGMFAVLLFVKVFHWLSRDRVENMEEQLLVPVRTHMKLVFLMLMLLLTDVYVLVQCISITV-TKGPSMLVLFTFEFAVLLLWLVSTMVRYAFQVIDARYDGHWEAKGLCSFYNELISDFLQLVVYIAFFMYVQAFYTLPLHIIRDIYLTFNKFQKRVSDFIRYRKVASTMNELFSEPTEEDFEQMDRICIICRDEMSTSGCKKLGCNHIFHTHCLQGWLRRQLNCPVCRTAIEV 337          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A0D2QXA5_GOSRA (RING-type domain-containing protein n=3 Tax=Malvoideae TaxID=214907 RepID=A0A0D2QXA5_GOSRA)

HSP 1 Score: 272 bits (696), Expect = 1.380e-80
Identity = 134/317 (42.27%), Postives = 213/317 (67.19%), Query Frame = 0
Query:   20 AVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATI 336
            AV+ HA  S+  FY  +VYLS SK++++   NM LV + ++W++T+ IFLG LR  E+ERL+ ++   ++E  FAI++FR DF+  F+A++  +LL+K+LHWLA+ R +Y+E     P+ +HIR+V  L  L  LDC   +  I+  +Q+   S+ + F+FE+ +L   + +N  +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + AD++RYR++ +N+++   + + EEL   D TCIICREEM +A KL CGH+FH  CL +WL+RQ +CPTCRA +
Sbjct:   17 AVIYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQITKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVPMLSHIRIVSFLGFLLLLDCLFLSSSIKFLIQTRQASVSLFFAFEYMILATTIVSNFIKYVFYVSDMLMEGQWEKKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYGVPLHLIRELYETFRNFKIRVADYMRYRKIASNMNDRFPDATAEELAANDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A3L6FPP6_MAIZE (RING-type domain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A3L6FPP6_MAIZE)

HSP 1 Score: 275 bits (702), Expect = 1.960e-80
Identity = 142/343 (41.40%), Postives = 221/343 (64.43%), Query Frame = 0
Query:   10 YVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATI---DVNRGARNQERSA 349
            Y  FS+  +A+   +A  S++ FY  +VYLS SK+  +   N  LV++ + W+L + +FLG LR  E+ERL+ ++   +IE  FA+++FR DF+  F+A++  +LL+K+LHWLA+ R +Y+E     PL +HIR+V  ++ L  +DC   +  + S +Q    S+ + FSFE+T+L     +   +YIF++ D  M+G+W  K V++FY EL+ DL  L++Y++FFI + + Y  P H+IRE Y T   F+ + AD++RYR++ +N++E   E + EEL   D TCIICREEM +A KL CGH+FH  CL +WL+RQ +CPTCRA I   D  R A +++  A
Sbjct:   83 YAAFSLLATASAAYYAFSSREQFYPAMVYLSTSKICFVLLLNTGLVAMCVAWQLARRLFLGSLREAEVERLNEQSWREVIEILFAVTIFRQDFSVSFLAMVAALLLVKALHWLAQKRVEYIETTPSVPLLSHIRIVSFMVFLLTVDCLFLSNSLRSLIQKREASVAIFFSFEYTILATSTLSTFVKYIFYVSDMLMEGQWERKAVYTFYLELISDLVHLSLYMLFFIAIFLNYGVPLHLIRELYETFRSFRIRIADYIRYRKITSNMNERFPEATSEELDASDATCIICREEMTTAKKLLCGHLFHVHCLRSWLERQHTCPTCRAPIVPADNGRAASSRQHGA 425          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A251VGG6_HELAN (Putative ERAD-associated E3 ubiquitin-protein ligase HRD1 n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VGG6_HELAN)

HSP 1 Score: 280 bits (715), Expect = 2.800e-80
Identity = 138/335 (41.19%), Postives = 220/335 (65.67%), Query Frame = 0
Query:   14 SVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGARNQERS 348
            SVF + AV+ HA  S+  FY   VYLS SK+ ++   NM LV + ++W+LT+ +FLG LR  E+ERL+ ++   ++E  FAI++FR DF+ +F+A++  +LL+KSLHWLA+ R +Y+E     P+ +H+R+V  +  L  +DC      ++  +Q+   S+ + FSFE+ +L     +   +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + AD++RYR++ +N+++   + + EEL + D TCIICREEM +A +L CGH+FH  CL +WL+RQ +CPTCRA +  N GA +  RS
Sbjct:   93 SVFATLAVIYHAFSSRGQFYPATVYLSTSKVCLVLLLNMGLVIMCIMWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVMFLAMVTALLLIKSLHWLAQKRVEYIETTPTVPMLSHVRIVSFMGFLLLVDCLFLYNSVKYLIQTRQASVSLFFSFEYMILATTTMSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFVNYGVPLHLIRELYETFRNFKLRIADYIRYRKITSNMNDRFPDATPEELNESDATCIICREEMTTAKRLVCGHLFHVHCLRSWLERQHTCPTCRALVIPNEGATSSSRS 427          
BLAST of Gcaud9488.t2 vs. uniprot
Match: A0A5C7GWJ4_9ROSI (RING-type domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GWJ4_9ROSI)

HSP 1 Score: 278 bits (710), Expect = 3.860e-80
Identity = 141/327 (43.12%), Postives = 219/327 (66.97%), Query Frame = 0
Query:   10 YVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAANMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRDDFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLMLLAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFLIDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIREFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICREEMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATI 336
            Y  FS+  + AV+ HA  S++ FY ++VYLS SK++++   NM LV + ++W+L + IFLG LR  E+ERL+ ++R  I+E  FAI++FR DF+  F+A++ T+LL+K+LHWLA+ R +Y+E     P+R+HIR+V  +  L  LDC      ++  LQ+   S+ + FSFE+ +L     +   +Y+F++ D  M+G+W  K V++FY EL+ DL  L++Y+ FF+ + + Y  P H+IRE Y T   F+ + ADF+RYR++ +N+++   + + EEL   D TCIICREEM +A KL CGH+FH  CL +WL+RQ +CPTCRA +
Sbjct:    7 YAGFSLLGALAVIYHAFNSRRQFYPSMVYLSTSKISLVLLLNMGLVIMCILWQLIKRIFLGHLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLAQKRVEYIETTPTVPMRSHIRIVSFMGFLLLLDCLFLYSSVKFLLQTRQASVSLFFSFEYMILATTTVSTFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLAIFMNYGVPLHLIRELYETFRNFRIRVADFVRYRKITSNMNDRFPDATPEELNASDSTCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333          
The following BLAST results are available for this feature:
BLAST of Gcaud9488.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5U4_9FLOR3.110e-21860.47ERAD-associated E3 ubiquitin-protein ligase HRD1 n... [more]
R7QRC3_CHOCR1.620e-13855.10RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A7S0ZHY2_9RHOD4.190e-10348.99Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S1TGM3_9RHOD3.070e-9348.82Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6NM01_PORUM1.300e-8947.18RING-type domain-containing protein n=1 Tax=Porphy... [more]
A0A5J4YLY9_PORPP2.300e-8946.25ERAD-associated E3 ubiquitin-protein ligase HRD1B ... [more]
A0A0D2QXA5_GOSRA1.380e-8042.27RING-type domain-containing protein n=3 Tax=Malvoi... [more]
A0A3L6FPP6_MAIZE1.960e-8041.40RING-type domain-containing protein n=2 Tax=Zea ma... [more]
A0A251VGG6_HELAN2.800e-8041.19Putative ERAD-associated E3 ubiquitin-protein liga... [more]
A0A5C7GWJ4_9ROSI3.860e-8043.12RING-type domain-containing protein n=1 Tax=Acer y... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 462..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 572..595
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..595
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 701..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 626..645
NoneNo IPR availablePANTHERPTHR22763:SF174SUBFAMILY NOT NAMEDcoord: 9..337
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 9..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 243..798
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..201
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..174
NoneNo IPR availableCDDcd16479RING-H2_synoviolincoord: 292..333
e-value: 4.7409E-21
score: 84.6571
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 275..343
NoneNo IPR availableTMHMMTMhelixcoord: 144..163
NoneNo IPR availableTMHMMTMhelixcoord: 104..123
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 221..243
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 10..27
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 295..332
e-value: 2.0E-7
score: 40.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 294..333
e-value: 1.4E-10
score: 41.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 295..333
score: 13.108904
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 267..346
e-value: 1.5E-21
score: 77.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_998_length_15307_cov_4.891167contigNODE_998_length_15307_cov_4.891167:12534..14930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9488.t2Gcaud9488.t2Gracilaria caudata M_176_S67 malemRNANODE_998_length_15307_cov_4.891167 12534..14930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9488.t2 ID=Gcaud9488.t2|Name=Gcaud9488.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=799bp
MPNVASFKFYVFFSVFLSAAVLSHAIYSKKFFYRTVVYLSRSKLAIMCAA
NMALVSILLIWRLTQLIFLGPLRFRELERLHHRARDTIIEYCFAISVFRD
DFNTLFVALIMTVLLLKSLHWLAKDRTDYLEEQLRCPLRTHIRLVGLLML
LAFLDCFLATICIESTLQSNGRSMYVLFSFEFTLLFIELAANVFQYIFFL
IDQRMDGRWASKGVFSFYAELLCDLSTLTIYIVFFIYVQIYYSFPYHIIR
EFYVTLSKFQRKCADFLRYRRVVANIHEVVEEVSEEELQQGDRTCIICRE
EMESAIKLGCGHMFHRRCLENWLKRQLSCPTCRATIDVNRGARNQERSAN
QNANANQPAAANAPGAQPQNANQPRRAAHIGPLAAQQNQQPPRQQAGQNG
AQNANIGEAGARLLNFANQWINQVMNDAGIRPQANAQNQNVPNANNAQAH
HAHQPNHNQQHHRHQQNQAQMLQARIRQAAQQRVQHILRQNPHAFLNYQG
VAGPNAIAHMQLRARRRGALNGLRQYPAGYRVNLPPRNNGVHAMNNAQNE
NANVATAGNPPTNGAPDQGGTHGAASASNEPNAAQQGVVGSSSTSAAASS
STASNAFASSEGTGVRAAQAGSSGASAIRIDSHTQRAGELDQTATASAAM
HTGLASQLGPGAGAHTLPLERLFEIQRQIEVLRSEVQSLVLHATEAQLHA
MERDEQQTVAGGGATSDTAQAGADVGGSGGDGGAPSTEDGAVADEGAAGE
GAAEQQEAVQSGGSAGDSGNAERHEGEDSEAERIRRRRIEFLERTSRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD