Gcaud826.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud826.t1
Unique NameGcaud826.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length278
Homology
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A2V3IT28_9FLOR (Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT28_9FLOR)

HSP 1 Score: 461 bits (1186), Expect = 7.230e-146
Identity = 227/277 (81.95%), Postives = 250/277 (90.25%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPAPPSPIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRAYEGNCNILDVLGLGIQIPEDLRIATALNIYVFADYDHSETVDVVTTACVPLEKWLSEHHRRLLTGETLIEDSFGTDAPVPQRL 277
            +I QGRNLPAADDDGLSDPRF+VAMGDK   GSVLCRRTVSPLWEE+VE+ DINM E Q++P+VNVLIYDDDD  E M+Y GRSIIPCAELDTAEP LQ   WY VFSVNPGV+VGEILADFQLIPT VAIERPMP PP+PIRS+SV+ ISLVGLRDIKFLRYA GKLWVECA+SAVS+KPE+SK+  ILQQRAYEGNCNILDVL L I+IPED+R+A ALNIYV+ADYDHSE+ DVV TACVPLEKWLSEHHRRLLTGETLI+DSFGTDAPVP+RL
Sbjct: 1196 LILQGRNLPAADDDGLSDPRFMVAMGDKSRTGSVLCRRTVSPLWEEAVEIRDINMREGQRKPNVNVLIYDDDDG-EPMQYLGRSIIPCAELDTAEPSLQFAKWYPVFSVNPGVVVGEILADFQLIPTPVAIERPMPEPPTPIRSDSVMRISLVGLRDIKFLRYAVGKLWVECAVSAVSMKPERSKKGTILQQRAYEGNCNILDVLVLDIRIPEDIRLAPALNIYVYADYDHSESTDVVATACVPLEKWLSEHHRRLLTGETLIDDSFGTDAPVPERL 1471          
BLAST of Gcaud826.t1 vs. uniprot
Match: R7QRB4_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRB4_CHOCR)

HSP 1 Score: 359 bits (922), Expect = 2.570e-111
Identity = 178/277 (64.26%), Postives = 222/277 (80.14%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPAPPSPIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRAYEGNCNILDVLGLGIQIPEDLRIATALNIYVFADYDHSETVDVVTTACVPLEKWLSEHHRRLLTGETLIEDSFGTDAPVPQRL 277
            +I QGRNLPAAD+ GLSDPR VV+MGDK   G V C++TVSP WEE +EV DI + + +++P+VN+LIYD D +   M Y GRSIIPCAELD+A P L+   WY VFSVNPGVIVGE+LADFQLIP+E AI  PM     P R+ES L ISLVGLRD+KFL+YAAG ++VECA+S+ S+KP +SKR  ILQ+RA+E NCNILDVL L I++PEDLR+A AL++YV+A+Y+ S   D++ TA +PLEKWL EHHR+LLTGE+LI+DSFGTDA VP+RL
Sbjct:  397 LILQGRNLPAADETGLSDPRVVVSMGDKSEYGQVFCKQTVSPSWEELIEVKDIKIRDGERKPNVNILIYDYDGEDIPMAYLGRSIIPCAELDSAPPTLEHSEWYPVFSVNPGVIVGEVLADFQLIPSEFAIAHPMRPFDPPDRTESGLRISLVGLRDVKFLQYAAGDIFVECAVSSDSVKPVRSKRGTILQRRAFEANCNILDVLVLEIKVPEDLRLAPALSVYVYAEYNQSHAPDMIATAVIPLEKWLFEHHRKLLTGESLIDDSFGTDALVPERL 673          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A1X6NMX4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMX4_PORUM)

HSP 1 Score: 301 bits (771), Expect = 7.980e-90
Identity = 152/277 (54.87%), Postives = 201/277 (72.56%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPAPPSPIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRAYEGNCNILDVLGLGIQIPEDLRIATALNIYVFADYDHSETVDVVTTACVPLEKWLSEHHRRLLTGETLIEDSFGTDAPVPQRL 277
            +I QGR+LPAAD+ GLSDP   V+MGD+   G+++   TV+PLWEE +EV  + + + ++ P+VNVL+YD D+D    +Y GR+IIP AELD  EP +    WY VFSVNP V VGEILADFQLI   +A+ RP+ AP  P+R++S L +SL+GLRD+ F  +A+G L+VEC++S    KP +SKR AILQQR YEGNCNILDVL L I IPEDLR+A ALN+YV+ +  H     ++ T C+PL+ WLS H R+LL+G  LI+DSFG DAP+P+ L
Sbjct: 1192 LILQGRDLPAADETGLSDPFVHVSMGDQFKKGTIIRCDTVAPLWEELIEVPGVTIRDGERRPNVNVLVYDWDEDG-TFDYLGRAIIPSAELDDIEPSVAHAKWYPVFSVNPDVKVGEILADFQLIEQHMALSRPITAP-VPVRTQSALRVSLLGLRDVHFYDFASGHLFVECSVSGFEGKPIRSKRGAILQQRNYEGNCNILDVLVLDIGIPEDLRLAPALNVYVYTELAHKSGSQLLATTCIPLQGWLSAHERKLLSGVALIDDSFGLDAPIPESL 1466          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A7S3A4P5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A4P5_9RHOD)

HSP 1 Score: 153 bits (386), Expect = 2.920e-38
Identity = 98/258 (37.98%), Postives = 148/258 (57.36%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPAPPS-----PIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRA-YEGNCNILDVLGLGIQIPEDLR---IATALNIYVFADYDHSETVD--VVTTACVPLEK 247
            +  QGRNLPAAD  GLSDP   V+MG++   G+  C+ TV P+WEE + + +I++ E ++ P+VN+L+YD DD     +Y GR+II  A L   E   +  +WY VF+ +P   VG+ILADFQLIP +   E P P P        + S ++L ++ +G+RD++FLR+A G L +       +   E +++  ILQQ   Y+G  ++LDV  L I+  +D +   +   L   V A Y  S + D  VV + C  LE+
Sbjct: 1244 LCLQGRNLPAADQSGLSDPFVRVSMGERSKQGTASCKETVCPIWEEEIVIKNISIRENEKCPNVNILVYDHDDGPNY-DYLGRAIIAGASLTDTEVDPKKALWYDVFAFDPERTVGQILADFQLIPQDGLEEEP-PEPQERRRFFDVESSTLLRMAFLGIRDVRFLRFAHGTLSLTATTPGDT---EVTRQVEILQQHGIYDGAADLLDVRMLRIESVKDQKENSVNPPLTFMVKAKYSLSVSRDEEVVGSTCFRLER 1496          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A5J4YJM4_PORPP (Dysferlin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJM4_PORPP)

HSP 1 Score: 140 bits (353), Expect = 7.350e-34
Identity = 91/318 (28.62%), Postives = 164/318 (51.57%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQL----------IPTEVAIERPMPAPPS---------------------------PIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRAYEGNCNILDVLGLGIQIPED-LRIATALNIYVFADYDHSETVD---VVTTACVPLEKWLSEHHRRLLTGETLIEDSFGTDAPVPQRL 277
            ++ +GR+LPAAD  GLSDP F +++G++     + C +T +P+W+  + V +I + E Q+ P+VNV++ D ++D    +Y GR++I  ++++      +   WY VFS +P    GEILADFQL          I  +   ++ +   P+                           P R+   L +S++G+ D++FLR AAGK+ +E  ++     P+ ++   +L  R +E N +ILDV+ L + +PE   R A +LN++    + + +  +   ++ T  + L  ++    R+  T + L  D +G D PVP+ L
Sbjct: 1485 LVLKGRDLPAADASGLSDPLFTISVGNRTVDWKIYCEQTKNPVWDAFIVVKNIMVREGQRFPNVNVMVKDYNEDLNF-DYLGRAMINISDIEEDPVDFRTARWYPVFSASPEYQNGEILADFQLQAQLGLEEEEIQEQEPPQQEVAQSPNDRQAESGNLYQSLDTKLAARVGGECELPRRTNRYLRLSVLGVEDLRFLRPAAGKVHLEMTVTREEPMPQVTRSGNLLLDREFEANVSILDVVFLRVGMPEQGRRYAESLNVFCKGTFPYMKPGNDSHLIGTTSIDLAGYVPMLRRQEKTYKDLAMDKYGMDDPVPRYL 1801          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A5J4YPJ4_PORPP (Fer-1-like protein 6 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPJ4_PORPP)

HSP 1 Score: 130 bits (328), Expect = 1.550e-30
Identity = 82/275 (29.82%), Postives = 139/275 (50.55%), Query Frame = 0
Query:    2 ITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPA--PPSPIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRAYEGNCNILDVLGLGIQIPEDLRIATALNIYVFADYDHSETVDVVTTACVPLEKWLSEHHRRLLTGETLIEDSFGTDAPVP 274
            I +GR LP AD +GLSDP   ++MGD    GSV+CR+T++P+W E++ +  ++    +  PD++V IYD D+D  + ++ GR+ +P  EL      +    WY VF+ NP  IVGEI A FQ +  + A    +    P  P    SVL +SL  + D +   Y    ++++  +S       ++ R  I+       N ++++VL + +Q+P+    A +LNI +          +    A + L  +L    R +L    ++ + FG  A +P
Sbjct: 1523 IIEGRQLPTADPNGLSDPFVKISMGDCMAKGSVICRQTLNPVWGETLVLPKVSFRAGEPWPDLHVFIYDWDEDG-LSDFLGRATVPWYELRDTPWDVSRAKWYPVFASNPEFIVGEISAAFQFVRHDDASSAGLRLLKPVRPKFETSVLQLSLFSVMDARISPYQTASMFLKVQLSGEGALALRTSRVPIIPVSESSINASLMEVLLIPLQVPDLDAYAPSLNIILCTQNSKGTRTEHAAAASISLSHFLRNIDRDVLEMNEIMSNDFGKSAGLP 1796          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A7S0BFE2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFE2_9RHOD)

HSP 1 Score: 128 bits (322), Expect = 2.600e-30
Identity = 86/236 (36.44%), Postives = 133/236 (56.36%), Query Frame = 0
Query:   23 VAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPAPPS-----PIRSESVLGISLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRA-YEGNCNILDVLGLGIQIPEDLR---IATALNIYVFADYDHSETVD--VVTTACVPLEK 247
            V+MG++   G+  C+ TV P+WEE + V +I++ E ++ P+VN+L+YD DD     +Y GR+II  A L   E   +   WY VF+ +P   VG+ILADFQLIP E   E P P P        + S +VL ++ +G+RD++FLR+A G L +  +    +   E +++  ILQQ   Y+G  ++LDV  L I+  +D +   +   +   V A Y  S + D  VV + C  LE+
Sbjct:    3 VSMGERSKQGTASCKETVCPIWEEEIVVKNISIRENEKCPNVNILVYDHDDGPNY-DYLGRAIISGASLTDTEVDPKKAQWYDVFAFDPERTVGQILADFQLIPQEGLEEEP-PEPQERQRLFDVESSTVLRMAFLGIRDVRFLRFAHGTLALSASTPGDT---EVTRQVEILQQHGIYDGAADLLDVRMLRIESVKDQKENSVNPPITFMVKAKYSFSVSRDEEVVGSTCFRLER 233          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A5J4YPY6_PORPP (Dysferlin n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPY6_PORPP)

HSP 1 Score: 126 bits (317), Expect = 4.500e-29
Identity = 84/257 (32.68%), Postives = 133/257 (51.75%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQVGMWYSVFSVNPGVIVGEILADFQLIPTE---------------VAIERPMPAPPS------PIRSESVLGISL-----------------VGLRDIKFLRYAAGKLWVECAISAVS-LKPEQSKRSA---ILQQRAYEGNCNILDVLGLGIQIPEDL 215
             I +G+N+PAAD  GLSDP  V+++G++R  G V+C +TV+P+W+E + + ++   E +  P++N+++YD ++ +  ++Y GR+II    LD   P ++   W+SVF+ NP   VGEILADFQLI                    I  P  +  S      PIR E  +  +L                 VGL  ++ LR   G+ +V+ ++S    L+P  + RS    I Q   Y G+C ++D L L  Q P +L
Sbjct: 1685 FIIRGKNIPAADASGLSDPFVVLSIGNRRQKGKVVCWQTVAPVWKEIMLIENVEWLEGESRPNLNIILYDWNETK--VQYLGRAIINAENLDERPPSVETAKWHSVFTTNPVYPVGEILADFQLIQKSGPGSGHREDLSALFTTRIVAPTFSSSSKSGRELPIRHEPTVAATLSLDLLPKMVTRTIMVTFVGLEKVRLLRKPHGRFFVDVSLSPKEELRPLYTLRSRFGKITQTDEYVGSCALIDCLVLRAQFPAEL 1939          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A7S0ZEB9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEB9_9RHOD)

HSP 1 Score: 73.6 bits (179), Expect = 5.270e-13
Identity = 33/74 (44.59%), Postives = 54/74 (72.97%), Query Frame = 0
Query:    1 MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEVTDINMTEEQQEPDVNVLIYDDDDD 74
            ++ +GRNLPAAD  GLSDP   V +GD++   +++C+ T +P+W+E V V +I + E ++ P+VNV+++D DDD
Sbjct:   27 LLLKGRNLPAADVSGLSDPIVEVHVGDRKQRATLICKETSTPIWDELVTVRNIAVREGERFPNVNVMVFDWDDD 100          
BLAST of Gcaud826.t1 vs. uniprot
Match: A0A7S0ZE93_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZE93_9RHOD)

HSP 1 Score: 72.4 bits (176), Expect = 3.870e-12
Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 0
Query:  110 NPGVIVGEILADFQLI-PTEVAIERPMPAPPS--------PIRSESVLGISLVGLRDIKFLRYAAGKLWVECAIS---AVSLKPEQ-----SKRSAILQQRAYEGNCNILDVLGLGIQIPE-----DLRIATALNIY 224
            +P V +GEILADFQL    +  +  P PA P         P R   ++ +S+ GL DI FLR+ AGK ++E +++   +V    ++     SK++++L  R +E NC ILDVL L + +P      D R + +LN++
Sbjct:    1 SPEVTIGEILADFQLKRQPDGIVPEPEPASPLEMAAAAGVPTRETFLMRVSVFGLTDISFLRFPAGKAFLEMSVTRAGSVDATDQRQAGVVSKKASLLVDREFESNCGILDVLMLEVGVPTGGDQADFRFSESLNVF 137          
The following BLAST results are available for this feature:
BLAST of Gcaud826.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IT28_9FLOR7.230e-14681.95Dysferlin n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7QRB4_CHOCR2.570e-11164.26C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A1X6NMX4_PORUM7.980e-9054.87Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3A4P5_9RHOD2.920e-3837.98Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YJM4_PORPP7.350e-3428.62Dysferlin n=1 Tax=Porphyridium purpureum TaxID=356... [more]
A0A5J4YPJ4_PORPP1.550e-3029.82Fer-1-like protein 6 n=1 Tax=Porphyridium purpureu... [more]
A0A7S0BFE2_9RHOD2.600e-3036.44Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A5J4YPY6_PORPP4.500e-2932.68Dysferlin n=1 Tax=Porphyridium purpureum TaxID=356... [more]
A0A7S0ZEB9_9RHOD5.270e-1344.59Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S0ZE93_9RHOD3.870e-1235.04Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 2..95
e-value: 6.7E-7
score: 29.6
IPR000008C2 domainPROSITEPS50004C2coord: 1..104
score: 11.984066
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 1..119
e-value: 2.3E-10
score: 42.3
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 2..126
IPR037721Ferlin familyPANTHERPTHR12546FER-1-LIKEcoord: 4..230
NoneNo IPR availablePANTHERPTHR12546:SF33C2 CALCIUM-DEPENDENT MEMBRANE TARGETINGcoord: 4..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_995_length_15379_cov_4.695120contigNODE_995_length_15379_cov_4.695120:7175..8008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud826.t1Gcaud826.t1Gracilaria caudata M_176_S67 malemRNANODE_995_length_15379_cov_4.695120 7175..8008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud826.t1 ID=Gcaud826.t1|Name=Gcaud826.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=278bp
MITQGRNLPAADDDGLSDPRFVVAMGDKRTAGSVLCRRTVSPLWEESVEV
TDINMTEEQQEPDVNVLIYDDDDDREIMEYFGRSIIPCAELDTAEPFLQV
GMWYSVFSVNPGVIVGEILADFQLIPTEVAIERPMPAPPSPIRSESVLGI
SLVGLRDIKFLRYAAGKLWVECAISAVSLKPEQSKRSAILQQRAYEGNCN
ILDVLGLGIQIPEDLRIATALNIYVFADYDHSETVDVVTTACVPLEKWLS
EHHRRLLTGETLIEDSFGTDAPVPQRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf
IPR037721Ferlin