Gcaud852.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud852.t1
Unique NameGcaud852.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length710
Homology
BLAST of Gcaud852.t1 vs. uniprot
Match: A0A2V3J2D1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2D1_9FLOR)

HSP 1 Score: 581 bits (1498), Expect = 2.540e-196
Identity = 370/713 (51.89%), Postives = 468/713 (65.64%), Query Frame = 0
Query:   24 LTAVVCGAHTELGKFVLRELLRSDAVARVHALAELDPRSELRLTPAQAAKLVLYIDSLELLERTLSSNVSQCHLAFCTLGFKRKPPEMDSYQFHNYNVAIPKRFVQEMFRINADRISILCTKKASSRMSSSTLQRNSPSPADYARHLQIEQRESLTQSKIPGVSVFKVSLMLTDLKDQFGVKGTSISPIEQIREKLVFKLGIGASNAVHVRDVAKAMVADALEKLDLQNEQPDLALIFKSHQTAFDELRPNDIIITANEARAAQRSRYVQMRASRRMSSNVSGYARYQSGEQVTADDKLFPSDLSQSAVPSXXXXXXXXXXXXXXXXXXXXXXSGVKPSLPLDLFPRIEMEGFTAPTARPSENHSPILSAQPMLHAPPLDSSQLQQEHVSH----PPQSSIPLH----QPLSEGQQ--PFSPNQNIFQSPPNIAHGTKDLFISPKPSTATQYSAQNVIKESSPEGPAPF-PAVTSSVDALGRQLSRRLTIVHNNERLPGASTSPHRLPRRESEKQIRSKTSQTTDKLPRRRSTPVVSRKGNTSHTSKSPNSKSRSSH---------------SPAQHPFESDAXXXXXXXXXXXXXXXXXXXXSSQQRHTSGRSVPTASFHST-YNSEAGGRRRSEVDSLRRTKSSQGRRRGSFPNASAIISQISLIASRILEATDRPSVKRYRQAYDPNYLPRGDPRRQRAKDQRAMNATMI 709
            L AVVCGAHT+LGKFVLRELLRS  V  +HA AE DPRSELRL+PA A +L L+IDSL+ LER +++ V QCHLAFCT+G + KPP+M+ Y+F+NYNV++PKRF+  MFR+N DRI++  TKKASSR SS  +QR++ S  ++AR LQ+EQRES++++ +PG+S+FKV L+LTDL DQ GVKGT+ISP +QIREK+VFKLGIGASNAVHVRDVAKAMVADALEKLDLQNE+PDLA IFKS QTAFDEL P DII  AN+ R AQRS +++MR  R    N+   A  QS +QV+ + K  PS+LSQSAVPS        XXXXXXXX          PS P     + E+EG TAP    S  H+ + S   +  +        Q +H++     P  SS   H      LS+ ++  P +    + QSP       K    SP PS+A + ++ N     + E   P  PA+TS+V+ALG QL  RLTIVH+NERLPG STSP    RR S K   + T   + K+ +R+STP + +K +T  +S+ PNS                     SP QHPFESD                     SSQQR++ GRS+PT SF+S+ Y+ E G RRRSEVDS+R ++S   +R  S P+ASAI+SQISLIA+RILEATDRPSVKRY+QAYDPNYLPR DPR + AKD+R  +AT I
Sbjct:   31 LIAVVCGAHTQLGKFVLRELLRSPNVHEIHAFAEFDPRSELRLSPAHAHRLRLHIDSLDYLERNIATYVKQCHLAFCTIGLRYKPPDMNRYKFYNYNVSLPKRFLTIMFRMNVDRIALFSTKKASSRTSSVAMQRSTTSADNFARQLQVEQRESMSENPVPGISIFKVPLLLTDLMDQQGVKGTAISPFDQIREKVVFKLGIGASNAVHVRDVAKAMVADALEKLDLQNERPDLAFIFKSRQTAFDELYPADIINLANDTRDAQRSHFIEMRKRRSAPPNIPINAPRQSNDQVS-EKKYTPSELSQSAVPSALPSNAPTXXXXXXXXAH-------SPS-PTHQLQQTEIEGLTAPQVGASPQHAILHSHHSVSQSNSHPEHSKQHDHLTSFTHFPLPSSDKAHVEDSHQLSQAKEAAPLTMPGLVLQSP-------KKPSTSPTPSSAARRASHNNDSPEASETRRPQQPALTSTVEALGNQLGHRLTIVHDNERLPGTSTSPRPTSRRSSAKDFHTGTENGSAKVSQRKSTPQLRKKYST-QSSRIPNSXXXXXXXXXXXXXXXXXXXXXSPPQHPFESDDAQPPVGRYSDAQSLRSRPSRSSQQRYSGGRSMPTTSFYSSGYHPEEGVRRRSEVDSIRHSRSLHRKRSVSVPSASAIMSQISLIANRILEATDRPSVKRYQQAYDPNYLPRSDPRLRHAKDRRTTDATAI 726          
BLAST of Gcaud852.t1 vs. uniprot
Match: A0A2V3J2C5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2C5_9FLOR)

HSP 1 Score: 59.7 bits (143), Expect = 1.290e-6
Identity = 41/125 (32.80%), Postives = 65/125 (52.00%), Query Frame = 0
Query:   26 AVVCGAHTELGKFVLRELLRSDAVARVHALAELDPRSELRLTPAQAAKLVLYIDSLELLERTLSSNVSQCHLAFCTLGFKRKPPE-MDSYQFHNYNVAIPKRFVQEMFRINADRISILCTKKASS 149
            AVVCGAHT+LG+ + R LL+SD V RV A+A    R   +L+ +   K+  +      +++ LS  + +   AFC     ++  E MD   F   N   P +F+++MF +    ++IL    A S
Sbjct:   18 AVVCGAHTDLGRRLCRNLLQSDEVERVIAIAPERVRDLEKLSWSVERKMESHKADFGDMDKVLS-RIREADYAFCVTNTDKRAYEAMDRRSFRETNFTGPSQFIRKMFELGVLHLTILSHVNADS 141          
The following BLAST results are available for this feature:
BLAST of Gcaud852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2D1_9FLOR2.540e-19651.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J2C5_9FLOR1.290e-632.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 7..255
e-value: 3.5E-15
score: 57.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 604..624
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..650
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 25..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1229_length_12344_cov_4.015506contigNODE_1229_length_12344_cov_4.015506:6562..8691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud852.t1Gcaud852.t1Gracilaria caudata M_176_S67 malemRNANODE_1229_length_12344_cov_4.015506 6562..8691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud852.t1 ID=Gcaud852.t1|Name=Gcaud852.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=710bp
MSEQPASASNPLSASTTVASASALTAVVCGAHTELGKFVLRELLRSDAVA
RVHALAELDPRSELRLTPAQAAKLVLYIDSLELLERTLSSNVSQCHLAFC
TLGFKRKPPEMDSYQFHNYNVAIPKRFVQEMFRINADRISILCTKKASSR
MSSSTLQRNSPSPADYARHLQIEQRESLTQSKIPGVSVFKVSLMLTDLKD
QFGVKGTSISPIEQIREKLVFKLGIGASNAVHVRDVAKAMVADALEKLDL
QNEQPDLALIFKSHQTAFDELRPNDIIITANEARAAQRSRYVQMRASRRM
SSNVSGYARYQSGEQVTADDKLFPSDLSQSAVPSALPSNTPSVAQSPAPF
APPAAPSGVKPSLPLDLFPRIEMEGFTAPTARPSENHSPILSAQPMLHAP
PLDSSQLQQEHVSHPPQSSIPLHQPLSEGQQPFSPNQNIFQSPPNIAHGT
KDLFISPKPSTATQYSAQNVIKESSPEGPAPFPAVTSSVDALGRQLSRRL
TIVHNNERLPGASTSPHRLPRRESEKQIRSKTSQTTDKLPRRRSTPVVSR
KGNTSHTSKSPNSKSRSSHSPAQHPFESDAAKSPTSRYSDAHSPRRRPSR
SSQQRHTSGRSVPTASFHSTYNSEAGGRRRSEVDSLRRTKSSQGRRRGSF
PNASAIISQISLIASRILEATDRPSVKRYRQAYDPNYLPRGDPRRQRAKD
QRAMNATMI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf