Gcaud1857.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1857.t1
Unique NameGcaud1857.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length878
Homology
BLAST of Gcaud1857.t1 vs. uniprot
Match: A0A2V3IG94_9FLOR (Putative RNA-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG94_9FLOR)

HSP 1 Score: 823 bits (2125), Expect = 1.930e-286
Identity = 487/877 (55.53%), Postives = 609/877 (69.44%), Query Frame = 0
Query:    6 KQTRSAKESQDRKTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEKPDDRTQQDKQSKEASAQPRKEKKNSAHGSVPMRTVLLRKLSPGDTLTEEEAKKAVGAHLEASGFQTCVLTSDGRQARCMYDSWSNAGKAAGRAHGGAIDAVIEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQ-----KPRQRRTEDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVRDSERNGRSKGYGFVQFSEHQHAMQALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQW-RNRRLIVEFAVEDKRIVQVLDRVREKGKQQVTKKRKKADSDGQELPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSRSERRFRHKRKQLSSTQSTNMTRSHNGRSEASDGPAHMEKIGRKLSKETQVGKD--KKKRSKRTAQDVKFDHLVDKYRKKIANVGGKPRSDSVNKHQKNETGPSVRWF 874
            KQ +  KE +  KTLF RNLHESVTK +LE+HFGGIGPLRHAFLVT+PGS  CKGYGF+TFAF+EDA+RART+L +SLLKGRK+ LD AR+R RSS++K   +T++D Q  +      + KK +A GSV MRTVLL+K S  DT+TE+EAK AVGA    SGFQ C+L+SD + ARC +DSWSNAGKAA  AHG A DAVIEALK GQRT LIVRNLPFRVD  QLRA F+A+AP+RS+RLAP SELRR D  R +K  S      + N    + + VPCAGYAFIEYFLV+ A+ A+  LN TK+G RVIAVDMA+SKSQYV Q  +QE E+     D P+E+E  Q  +       S + I+  +P S E+   + S    E ++Q     KP++R T     E+ RTVF RN+LFETS  ELR+A+ +RFG V K L+VKDP TGRPRGTAFVIFK E +AR+AV  T  SE G+     + A   FVL GR+LLL+MAVDRS AKDLKSTIPLH +K+++ DPRN RLAW+GHI P++K+A GLSP D++RRA AEKEK+TKLERNPNAF+S+VRLS+RNLPRECDEK LK + LL+A+E+A   E + S   PK+TH+T+VRD+ER  RSKGYGFVQF+EH HA+ AL H+NNNPR++EW+++KKPK LRID+ RA L++ QW RNRRLIVEFAVED+RIVQVLDRVREKG++   KKRK          XXXXXXXXXXXX                    + RSE+RF  K+++ S   ST   +S   R+ A       EK       +    K   KK R K+  ++ KF+ LV  Y+KK+ +  GK ++  + K     +GP VRWF
Sbjct:    2 KQPKQKKEFESGKTLFARNLHESVTKADLETHFGGIGPLRHAFLVTSPGSTSCKGYGFITFAFAEDAERARTLLSESLLKGRKMFLDNARRRIRSSDDK---QTKEDMQPSKQKGTSNRGKKGTAVGSVSMRTVLLQKRSKEDTITEDEAKIAVGADRNGSGFQVCILSSDRKLARCTFDSWSNAGKAAANAHGDAFDAVIEALKGGQRTTLIVRNLPFRVDAKQLRAVFQAVAPIRSMRLAPPSELRRLDKPRKRKNRSSGGDDTNTNTEDPQENVVPCAGYAFIEYFLVSFAKHAMSKLNGTKVGNRVIAVDMALSKSQYVAQGLNQELEDQ----DIPSEDEEVQASKGNDTEGGSEV-IQPQKPCSEEKNDNNTSPKVLESSNQLPKPLKPKERSTNP--NEMARTVFVRNLLFETSAGELRQAMVDRFGKVDKTLLVKDPKTGRPRGTAFVIFKSEDSARKAVNHTVPSEPGEQSFFESDA-GGFVLQGRRLLLTMAVDRSKAKDLKSTIPLHAKKDKEDDPRNFRLAWIGHIQPNTKEAFGLSPKDLARRATAEKEKKTKLERNPNAFVSDVRLSIRNLPRECDEKMLKHMCLLAAREKAERNEQDKSAELPKVTHVTVVRDTERKDRSKGYGFVQFTEHSHALNALLHLNNNPRVMEWLVEKKPKALRIDEIRAGLLQSQWGRNRRLIVEFAVEDRRIVQVLDRVREKGREMSEKKRK----XXXXXXXXXXXXXXXXXXTARNDRVTADVQEEHRDVVSKPRSEKRFERKKQRYSLKPSTGPQKSETDRTGAKRPAILSEKEDTVFQSKGAAHKTGRKKNRPKKVDEEDKFERLVGAYKKKLVSTEGKKQNSGLMKVDPKGSGPPVRWF 863          
BLAST of Gcaud1857.t1 vs. uniprot
Match: R7QA33_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA33_CHOCR)

HSP 1 Score: 488 bits (1256), Expect = 1.110e-155
Identity = 314/745 (42.15%), Postives = 435/745 (58.39%), Query Frame = 0
Query:   19 TLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEK-----PDDRTQQDKQSKEASAQPRKEKKNSAHGSVPMRTVLLRKLSPGDTLTEEEAKKAVGAHLEASGFQTCVLTSDGRQARCMYDSWSNAGKAAGRAHGGAIDAVIEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDPTEEEHGQN-----GQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEK------------GELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEH----LPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEE---------GETSVGF------------PKITHLTIVRDSERNGRSKGYGFVQFSEHQHAMQALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQWRNRRLIVEFAVEDKRIVQVLDRVREKGK 716
            TLFVRNL    TK +L+SHFGG+GPLR   +VT   +  CKG+GFV +A ++DA+ A + L+ S+L GR+I+L  AR R R   ++     P     +DK  K+A             G++PMRTVLL++   G  ++EEEA+ A  ++ +     + +L +DG++ARC + SW+ AGKAA  AH   +DA IEA+K G+ T+LIVRNLPFRV+  ++R AF   APVR LRL P   L+          A D          + + + V CAG+ F+EYFLVA ++ A+  LN  K+GGR+IAVD+A+ KS Y+ +  +       D SD+   +E G                              ++  H + + Q+  +QK +    E EK             EL RTVF RN+LFETS  EL KA+   FG V++ ++VKD  TGRPRGTAFV F  E  A +AV Q      GD  H    L       FVL GR LL++ AVDRS AK L       T+K+   DPRNLRLAW+G I P + +A+GL+  D++RRAK++KEK+TKL RNPNAFIS+VRL VRN+P++ +++ LKQIFLL A+  AG E          GE++  F            P+IT+  I+RD  R  +SKGYGFVQF +H  A+ ALR +NNNP++I+ +I+  P  ++ID+ R  L+RKQW + RL  +FAVED+RIVQVL+ V++KGK
Sbjct:   10 TLFVRNLKPVTTKADLDSHFGGVGPLRRTLIVTDHSNGLCKGFGFVHYALADDANTALSSLNGSMLHGRRIALHFARPRQRGKADEDGGLVPRLPCPKDKPGKQA---------GKLKGTLPMRTVLLKRRD-GTEISEEEARGAFASNRKPD---SVLLVADGKEARCTFTSWAEAGKAAAVAHSNTLDACIEAMKGGKGTRLIVRNLPFRVNLHEIRNAFSKYAPVRELRLEPPRALKSFKDKDIAPAAQD----------EPDKTVVDCAGFGFVEYFLVADSKFALSKLNGAKVGGRIIAVDLALGKSDYIKRLDN-------DHSDEEKRKEAGTKLXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTLHTTIAHQK--NQKSKSHNVEKEKITVAAKPAVSSETELTRTVFVRNLLFETSASELWKAMSTEFGPVEQAVLVKDRVTGRPRGTAFVRFVMESGADKAVHQAG---EGDKSHSKSALRGPQAGGFVLQGRSLLIAKAVDRSKAKVLSEIESQGTKKD---DPRNLRLAWIGQIKPGTPEARGLTEVDLTRRAKSDKEKKTKLSRNPNAFISDVRLCVRNIPKDLEDQVLKQIFLLGAKNGAGTEATVARKSRGTGESAEDFKTGGDRPGYKRQPRITYCKIIRDEARKDKSKGYGFVQFEKHTDALTALRCVNNNPKVIDMLIKHAPSQMKIDEHRERLLRKQWGDGRLQADFAVEDRRIVQVLEEVKKKGK 716          
BLAST of Gcaud1857.t1 vs. uniprot
Match: A0A7S3EA36_9RHOD (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EA36_9RHOD)

HSP 1 Score: 286 bits (731), Expect = 1.160e-79
Identity = 234/713 (32.82%), Postives = 364/713 (51.05%), Query Frame = 0
Query:   16 DRKTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEKPDDRTQQDKQSKEASAQPRKEKKNS---AHGSVPMRTVLLRKLSPGDTLTEEEAKKAVGAHLEASGFQTCVLTSDGRQARCMYDSWSNAGKAAGRAHG----GAIDAVIEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQY-VTQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDL--KSTIPLHTRKNQDA---DPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVRDSERNG-----RSKGYGFVQFSEHQHAMQALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQWRNRRLIVEFAVEDKRIVQVLDR 710
            D++TL V  L +SVT+E+LE+ F  +G +RH  +VT  G    +G+GFV+F+  EDA+ A   L  + + G++I L  A +R R+ +        + + S++A+ +PRK +  +     G +P  +   R+ +P   + E     AV + L+       V   DG     +++ +  A     + HG      I       +A +R +LIVRNLPF  +E +L+  F    P+R + L    +                        GK+        G+AF+EYF    A +AV+T N  K+G R +AVD+AV+K++Y V Q+ +   E+  D   D  + E     + + E +  G A E        + +            ++P++  + DE  E+ RTVF RNVL ET+ +ELR  ++  FG+V+  ++VKD  TGR RG+AFV F+D+ +  + +++ S  ++     +   +     + GR+LL+  AV ++TAKD   +S     T K ++A   D RNL LA  G IA     A+GLSP D+ +R KAEKEK  KL  NPN ++S+ RL+VRNLP + D KALKQ+F      +AG+      V    +T   IVRD  R       RSKGYGFV F+EH+ A+ ALR +NNNP+ +   + K                +  + RRLIVEF++ED R V +L++
Sbjct:   21 DKRTLLVNRLSKSVTREDLEAAFSEVGVVRHCVVVTERGGQESRGFGFVSFSLPEDAELALKELQGTSIGGQEIRLSYANRRERNWS-------LESRGSEDANQEPRKPRIKAYRVEEGDLPKAS---RQTTP-IVVVEHTTVDAVNSVLQGLKKVVKVEEKDGAVV-VVFNRFKTARAKISKLHGLKSSSGISHAFFQSEARRRERLIVRNLPFSAEEKELKEVFGKYGPLREVHLPKKPD------------------------GKAR-------GFAFVEYFHGVDAMSAVKTANGAKLGSRTLAVDIAVAKNKYLVLQDEAVPEEDEQDQPSDMKQNE----SEDDDEKAERGYADEG-------DAEXXXXXXXXXXGHREPQRAESTDE--EILRTVFVRNVLLETTANELRLELKT-FGDVEHCVLVKDKATGRSRGSAFVRFRDQSSVPKILKE-SGYDTAAGRQVLDESDVGITVGGRRLLVVPAVSKTTAKDFVPESASLGGTMKKREASKEDKRNLWLAHEGRIAEGDPAARGLSPIDLEKRRKAEKEKIKKLTSNPNIYVSKTRLNVRNLPLDVDAKALKQMFA-----KAGN------VPLKGVTSCKIVRDEARKDSAGTPRSKGYGFVSFAEHESALNALRMVNNNPKALTTYLDKP--------------NEAHKERRLIVEFSLEDARKVLILNK 650          
BLAST of Gcaud1857.t1 vs. uniprot
Match: A0A7S2ZIC8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIC8_9RHOD)

HSP 1 Score: 276 bits (705), Expect = 3.930e-78
Identity = 221/666 (33.18%), Postives = 343/666 (51.50%), Query Frame = 0
Query:   16 DRKTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEKPDDRTQQDKQSKEASAQPRKEKKNS---AHGSVPMRTVLLRKLSPGDTLTEEEAKKAVGAHLEASGFQTCVLTSDGRQARCMYDSWSNAGKAAGRAHG----GAIDAVIEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQY-VTQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDL--KSTIPLHTRKNQDA---DPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVRDSERNG-----RSKGYGFVQFSEHQHAMQALRHMNNNPRLI 663
            D++TL V  L +SVT+E+LE+ F  +G +RH  +VT  G    +G+GFV+F+  EDA+ A   L  + + G++I L  A +R R+ +        + + S++A+ +PRK +  +     G +P  +   R+ +P   + E     AV + L+       V   DG     +++ +  A     + HG      I       +A +R +LIVRNLPF  +E +L+  F    P+R + L    +                        GK+        G+AF+EYF    A +AV+T N  K+G R +AVD+AV+K++Y V Q+ +   E+  D   D  + E     + + E +  G A E        + +            ++P++  + DE  E+ RTVF RNVL ET+ +ELR  ++  FG+V+  ++VKD  TGR RG+AFV F+D+ +  + +++ S  ++     +   +     + GR+LL+  AV ++TAKD   +S     T K ++A   D RNL LA  G IA     A+GLSP D+ +R KAEKEK  KL  NPN ++S+ RL+VRNLP + D KALKQ+F      +AG+      V    +T   IVRD  R       RSKGYGFV F+EH+ A+ ALR +NNNP+ +
Sbjct:   21 DKRTLLVNRLSKSVTREDLEAAFSEVGVVRHCVVVTERGGQESRGFGFVSFSLPEDAELALKELQGTSIGGQEIRLSYANRRERNWS-------LESRGSEDANQEPRKPRIKAYRVEEGDLPKAS---RQTTP-IVVVEHTTVDAVNSVLQGLKKVVKVEEKDGAVV-VVFNRFKTARAKISKLHGLKSSSGISHAFFQSEARRRERLIVRNLPFSAEEKELKEVFGKYGPLREVHLPKKPD------------------------GKAR-------GFAFVEYFHGVDAMSAVKTANGAKLGSRTLAVDIAVAKNKYLVLQDEAVPEEDEQDQPSDMKQNE----SEDDDEKAERGYADEG-------DAEXXXXXXXXXXGHREPQRAESTDE--EILRTVFVRNVLLETTANELRLELKT-FGDVEHCVLVKDKATGRSRGSAFVRFRDQSSVPKILKE-SGYDTAAGRQVLDESDVGITVGGRRLLVVPAVSKTTAKDFVPESASLGGTMKKREASKEDKRNLWLAHEGRIAEGDPAARGLSPIDLEKRRKAEKEKIKKLTSNPNIYVSKTRLNVRNLPLDVDAKALKQMFA-----KAGN------VPLKGVTSCKIVRDEARKDSAGTPRSKGYGFVSFAEHESALNALRMVNNNPKAL 617          
BLAST of Gcaud1857.t1 vs. uniprot
Match: A0A5J4YPM7_PORPP (RNA-binding protein 28 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPM7_PORPP)

HSP 1 Score: 233 bits (593), Expect = 7.950e-60
Identity = 185/537 (34.45%), Postives = 269/537 (50.09%), Query Frame = 0
Query:  203 DAVIEALKA-GQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTA-PADFV-----LHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPD--SKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSA------QERAGHEEGETSVG----FPKITHLTIVRDSERNG-----RSKGYGFVQFSEHQHAMQALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQWRNRRLIVEFAVEDKRIVQVLDRVREKG 715
            DA ++A ++  +R +LIVRN+PF+ ++  L   F    P+R + L P                           G S+S     AG+ F+++F+   A  AV   N  KI GRV+AVD+AVSK  Y       E E   DA   P       +             IE       E     +S+++ E+      +R       EL RT+F RNVLFETS  +LR A+   +G V++ ++V D TTGRPRG AFV F      ++A+      +  +A+HL      AD +     L GR++LL  A+D+ TAKD ++ +   T K ++ D RNL LA  G+I  D  S    G++P+D+ RR +A+ EK+ KL  NPN F+S  RL VRNLP++ D+K L Q+ L +A      QE  G  E E   G        T + +VR  ER       RSKG+GF++   H+ A+  LR +NNNPR +  +I    +    D  R         ++RLIV+FA+EDKR +QVL+R ++KG
Sbjct:  645 DAHVDAYRSTSRRARLIVRNVPFKANKQHLETFFSKCGPIREIVLPPKP-------------------------GTSQSPSNLHAGFGFVQFFIPTDAVQAVTRCNGEKILGRVVAVDVAVSKEVYQKVAHDDERETLGDA---PGSAHSISDXXXXXXXXXXXXXIER-----GENRASKRSKTDSEIEATLKPKRAGVSSTEELARTLFIRNVLFETSKDDLR-ALLSTYGTVEQCVLVTDKTTGRPRGNAFVRFASIDAMQKALDAARYEKYQNAQHLRVEDYEADGIGIGLPLMGRRILLFPAIDKGTAKDAEAKMQAMTGKRKE-DKRNLWLALEGYIDVDGQSPATAGMTPDDIERRRRAQTEKRNKLSTNPNLFVSTTRLCVRNLPKDLDDKTLSQLALAAAKQARQVQEADGSGEIEPRTGKFAPSELFTQVKVVRSEERRDLTGKQRSKGFGFIECKRHEMALGILRVLNNNPRALSRLIPGWTQQAPHDRHRQ--------HQRLIVDFALEDKRKLQVLERTKKKG 1138          
BLAST of Gcaud1857.t1 vs. uniprot
Match: A0A4P9Z2L6_9FUNG (Uncharacterized protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z2L6_9FUNG)

HSP 1 Score: 202 bits (513), Expect = 2.790e-51
Identity = 221/774 (28.55%), Postives = 347/774 (44.83%), Query Frame = 0
Query:   13 ESQDRK---TLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDF--------CKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEKPDDRTQQDKQSKEASAQPRKEKKNSAHGSVPMRTVLLRKLSPGDTLTEEEAKKAVGAHLEASGF----------QTCVLTSDGRQARCMYDSWSNAGKAAGRAHG-----GAIDAV-----IEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEKG----ELRRTVFFRNVLFET---SVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIF----------KDEKTAREAVRQTSASESGD----------AEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFL-----------------LSAQERAGHEEGETSVGFPKITHLTIVRDSERN------GRSKGYGFVQFSEHQHAMQALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQWRNRRLIVEFAVEDKRIV 705
            E+ DR+   TLFVR L       + ES F  +GP+R +F+V    S+         CKG+GFV FA SEDA+RA   L  +  + + +S+++A KR  ++ +K      Q +++KE +   RKE        V  RTV++        + ++  +K V      SG           +  V T D   AR +Y     A KA  + +G     G + A      ++++   +R +LIVRN+PF+  E  LR+ F     V  ++L                        KDN             G+AFI+Y  +A A  A++ LN T +  R IAVD A++K QY      Q  ++A +A  D T                +  +IE +     +E     S S++E            D       E   T+F RNV F+T   S++E+ +A    +G ++   I  D  TGRPRGTAFV F           + + A  A    ++S+S            +  + ++A   F L GR L ++ AVDR  A        + TR    AD RNL L   G I   S  A GL+P ++ +RA++   ++ +L   P+ F+S+ RLSVRNLP + D+K L+++ +                 L+A+ER   EEG + +  P++  + +VR  +R        RS G+ F+++ +H HA+ ALR++NNNPR ++                        + RRLIVEFA+E+ +I+
Sbjct:   14 EANDRRAKSTLFVRGL-----PADFESFFSEVGPVRSSFVVREKRSEEKHGSGKPPCKGFGFVQFAMSEDAERALEELATTKFRNQVLSMELALKRQEATLDK------QSQEAKEKAIALRKE------DPVLRRTVIVM------GIPKQVHRKQVVLRARKSGIVESVEYPWQDELHVPTDDTAIARVVYKETDEATKAITQLNGREFKNGKLTATPASKRVDSMLNDKRARLIVRNVPFKYRENDLRSMFAKYGTVTDVKLPR----------------------KDNKPSGL------LRGFAFIQYAKLADAAQAIKALNGTVLLNRTIAVDWALAKDQY-----DQAMKDAMEAGTDAT----------------TSSSIEAMVDAEHDEEYPDLSSSDEEEGXXXXXXXXXXDATNIVPMEPGCTLFLRNVSFDTEESSLYEMFRA----YGKLRYCRITMDHDTGRPRGTAFVCFWKRVDADRCLAEAEKANYAGSSVASSDSSTNRRGVIKSVLSPEVASSATQAFTLDGRVLNVTRAVDREQAAKFTEE-GVKTR----ADKRNLYLLNEGLITEGSPAAAGLTPVELKKRAESHALRKNQLNSRPDLFLSKTRLSVRNLPLDMDDKGLRRLAISAIGRFKQECKDGKRAPLTAEER---EEGWSRM--PRVVQVKVVRSKDRTDTSTGQARSTGFSFIEYGDHAHALAALRYLNNNPRALDG-----------------------QKRRLIVEFAIENAQIL 678          
BLAST of Gcaud1857.t1 vs. uniprot
Match: A9U4W9_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U4W9_PHYPA)

HSP 1 Score: 199 bits (506), Expect = 7.620e-50
Identity = 213/789 (27.00%), Postives = 336/789 (42.59%), Query Frame = 0
Query:   16 DRKTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEKPDDRTQQDKQSKEASAQPRKEKKNSAHGSVPM----RTVLLRKLSPGDTL-------------------TEEEAKKAVGAHLEASGFQT--------CV-----------------------------------LTSDGRQARCM---YDSWSNAGKAAGRAH------GGAI-------------DAVIEALKAGQRTK--LIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQ----------EHENASDASDDPTEEEHGQNGQTEKE-----SSASGLAIENLRPVSPEEMKKHK----------------SRSEQELNDQKPRQRRTEDEK------------------GELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVRDSER-----NGRSKGYGFVQFSEHQHAMQALRHMNNNP 660
            D +T+FVR+L  ++T   LE++FG +GP+R+ F V   GS+  +G+GFV FA  EDA RA    + + L+GRKI +++A++R       P D      + K+A      EK         M    + +  RK+S G+ L                    + ++KK      +AS  Q         C+                                   L  DG +   +   Y S   A +A    H      GGAI              A++  L+  +  K  LIVRNLPF + E  LR  F  +  V  + +                        K +N+ K         G+AF+ +   A A+ A++T+N T +  R IAVD AV+K +Y T               + E++ +                 KE     S    LA   L+ V+     K +                ++ +    + KP  + T+  K                    L RTVF RN+  E +V +LR+   + FG V+   +V  P T RP+GTAFV F   + A+EA+   S +E          A    V+ GR +++++A+DR  AK +   +   +++  D D R+L+LA  G +   +  A+GLS  D+ +R + E EK TKL R+PN  +S  RL+V N+P++  EK LKQ+F+ + + +A  +        P +  + I+RD  +     +G+S+G  FV+F+EHQHA+ ALR +NNNP
Sbjct:   27 DERTVFVRSLPYTLTDAQLEAYFGEVGPVRNCFTVKQKGSERHRGFGFVNFAVKEDAIRAVETKNGAALQGRKIKVELAKRRA------PLDARHPKGKRKDAEGTKEDEKNVEGDSMAAMAPEDKGIKKRKVSDGEDLELSHGTAVESKLTNGRQPAVKPDSKKRPREEGKASESQRTARTVIIGCLENPKMVQAAIAKAKRLGKVEDVRHPVPEAELISRGLAKDGCKQEAVEVRYTSVKVAHQAVTALHKQNVGGGGAIWARQLGGEILIIFVAIMSVLQGAKLKKWRLIVRNLPFMLKEQTLRQLFSPLGFVWEVTIPR----------------------KPDNSSK---------GFAFVGFTCKADAEKAIQTVNGTLVSKRPIAVDWAVAKKEYETAASKTSVPGIHLLDIDIESSDEXXXXXXXXXXXXXXXXXKEQVIDFSEEKDLAKRILKKVTASSKTKEQDNVQLTDSLEIGGKQTAKQKSSAKETKPAVKETKTPKVADTVKNAKKVELAASQDDGLSRTVFVRNLPLEANVQDLRRQFSD-FGEVKAFRLVLHPITKRPKGTAFVEFVTAEGAQEAIAAASRTE----------ADGGLVVGGRNIIMNLALDRDKAKQVAREL---SKEQDDHDRRHLKLAKEGVVEEGTPAAQGLSKGDLMKRKQVEHEKATKL-RSPNFHVSTTRLAVHNIPKDMTEKELKQLFIQAVKSKASKQN-------PALKQVKILRDEVKGVPGSSGKSRGAAFVEFTEHQHALVALRVLNNNP 756          
BLAST of Gcaud1857.t1 vs. uniprot
Match: UPI0009E4F466 (RNA-binding protein 28-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4F466)

HSP 1 Score: 199 bits (506), Expect = 7.050e-49
Identity = 208/699 (29.76%), Postives = 317/699 (45.35%), Query Frame = 0
Query:   18 KTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGS-DFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIA------RKRFRSSNEKPDDRTQQDKQSKEASAQPRKEKK--------------NSAHGSVPMRTVLLRKLSPGDTLTEEEAK-KAVGAHLEASGFQTCVLTSDGRQ---ARCMYDSWSNAGKAAGRAHGGAIDA-VIE-----------ALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQEL------NDQKPRQRRTEDEKGELR------RTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVR-----DSERNGRSKGYGFVQFSEHQHAMQALRHMNNNPRL 662
            K LFVRNL  S T ++LE+ F  +GP++  F++   G+   C+G+G+VTFA ++DA +A  V+      GR++S+  A       KR  +  E P+D  +                                 A G+   RTV+L KL+          K + +GA       +      +GR+   A  ++ S  +A +A  + +G      VIE           +LK+ +++K+I+RNL F+  E  +R  F     V  + +    E                        GK + S     G+ F+++  V  A  A++  N  +I GR +AVD A++KS Y T+   QE ENA        ++E                   N   V   E K   S +E E       +D++ R+R T+ +K +        +T+F RN+ F++S   L  A+ E+FG +    I++D  TG  RG AFV +K  ++A + + +  A   G A  L      +F L+  K     AV R  A +L     +   + +  D RNL LA  G I P S  A+GLS  D+ +R KAEKEK+ KLE NPN F+S+ RL VRNL    D+K LK+IF  +A  R+             +  + I+R     DS   GRS GYGFV+F+ H+ A+ ALR  NNNP +
Sbjct:  543 KVLFVRNLPFSTTDQDLENIFSEVGPIKRCFVIRDKGAKSLCRGFGYVTFALADDAQKAIDVV--KTFGGRQLSVCFADKKPKHEKRKMTQGENPEDNKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAAGNDLGRTVVLTKLATDINQNHIRKKCRKIGA------VEKVTYPVEGREEPTAFVIFQSHKDAREAMKKLNGKIFKGNVIEVFLLSREGKTPSLKSMKKSKVIIRNLSFKCKENDIRKFFSQYGQVTEVHIPTKLE------------------------GKRKRSL----GFGFVQFSSVFEAAKAIKEANLKEIAGRPVAVDWALAKSVYETKK-GQEDENA--------DKEESXXXXXXXXXXXXXXXSGNESXVDSSEGKLGHSDNEDENEEGTKDSDEELRRRETQTKKSKQPSDVKEGKTLFIRNISFDSSEESLH-ALFEQFGEIDYCKILEDKRTGHSRGMAFVKYKMVESAEQCLEE--ACNEGSALSLD-----NFTLNVTK-----AVTRGKAAELAKEKKMEGNR-EAKDKRNLYLAKEGLILPGSTAAEGLSKADLLKRQKAEKEKKVKLE-NPNYFVSQTRLCVRNLALNVDDKKLKEIFSTAAGRRS------------HVQKVLIIRSKDRLDSSGRGRSMGYGFVEFANHKDALAALRATNNNPAI 1169          
BLAST of Gcaud1857.t1 vs. uniprot
Match: UPI001B88D14E (RNA-binding protein 28-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D14E)

HSP 1 Score: 196 bits (497), Expect = 2.520e-48
Identity = 219/836 (26.20%), Postives = 351/836 (41.99%), Query Frame = 0
Query:   17 RKTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSS-NEKPDDRTQQDKQSKEASAQPRKEKKNSAHG----------SVPM-------RTVLLRKLSPGDTLTEEEAK-KAVGA--HLEASGFQTCVLTSDGRQ-ARCMYDSWSNAGKAAGRAHGGAI------------DAVIEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYV-----------TQNPSQEHENASDASDDPTEEEHGQNGQTEKESSASGLA-------------------------------------------------------------------------IENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVRDSERN-----GRSKGYGFVQFSEHQHAMQALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQWRNRRLIVEFAVEDKRIVQVLDRVREKGKQQVTKKRKKADSD 729
            RKTLFVRNL  S T + LES F  IGP+R  F+VT  G+  C+G+G+V F+  EDA +A+  +     +GR + L  A    +    +KP    +Q+ + +EA  +  +EK  S+            S P+       RTV++R      T  + +   K+V A  HLE           DG   A   + S  +A  A  + HG  I            D      +  +  +LIVRNL F+  E QL+ AFE    +  +++    +                        GK         G+ F+++  V  A+ A+  +N+  I GR +AVD A+ K  ++           T   S + +  S  SDD  +       +T+ + +    A                                                                                   E+ + K   + +          T+ E+G   RT+F RNV F ++  EL+    E +G+V    +V DP   RP+GTAFV FK +++A   +++   S          T      + GR+LL++ AV+++ A++L +      +K  + D RNL LA  G I P ++ AKGLS  D+ +R K   + + KL +NPN ++S  RLS+ NLP   D+K LK+IFL +  ++        SV    +    I+RD  R      G+S+G+GFV+F+EHQHA++AL+ +NNNP +                           ++R IV F++E+K+ + V +R  +K KQ+   K+K + +D
Sbjct:    8 RKTLFVRNLPYSTTNDKLESIFADIGPIRQCFVVTEKGTKTCRGFGYVKFSLLEDAVKAKECIKS--FEGRNLFLTFADPGLKQKCRKKPSHGGKQEDKGEEAETEAGQEKDESSTEKNDVDKKEVKSPPVDKRNRIFRTVVVRGFDSSLTTDQVDGLFKSVKAIEHLE-------YPREDGNDFALVTFRSVKDANSAIRKLHGKNIAGYKLFAVQQSGDTDKTPKQGNKMARLIVRNLSFQCSESQLKKAFETFGEITEVKIPEKPD------------------------GKK-------CGFGFVQFAEVEVAKVAIDKMNSKPIAGRPVAVDWAIPKDLFIAASKQDVKKEPTAVSSPQQKTPSIKSDDVRDGSKCVKTKTKVQKNIVASADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFDXXXXXXXXXXXXXXXXXXXXXXXXXXEVGQEKDLKKTKXXXXXXXXXXTDVEEG---RTLFLRNVPFSSTTEELKDVFSE-YGDVMYCKVVMDPNHKRPKGTAFVQFKTKESADRCLKKAEDS----------TKDGGISVSGRQLLVTCAVNKNQAEELSNK---SKKKKDNKDTRNLYLAREGLIRPGTQSAKGLSQTDLGKRTKVFTQMREKL-KNPNIYVSSTRLSIHNLPTSIDDKQLKKIFLQAVADK-------NSV----LKESRIMRDMNRPNLKGVGKSRGFGFVEFTEHQHALKALQTINNNPDIFH------------------------DHQRPIVHFSLENKQALAVKERRMQKLKQKQEMKKKTSSTD 750          
BLAST of Gcaud1857.t1 vs. uniprot
Match: A0A8J1XJ32_OWEFU (Ofus.G021787 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XJ32_OWEFU)

HSP 1 Score: 194 bits (493), Expect = 4.550e-48
Identity = 202/728 (27.75%), Postives = 314/728 (43.13%), Query Frame = 0
Query:    6 KQTRSAKESQDRKTLFVRNLHESVTKENLESHFGGIGPLRHAFLVTTPGSDF-CKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRSSNEKPDDRTQQDKQSKEASAQPRKE----KKNSAHGSVPMRTVLLRKLSPGDTLTEEEAKKAVGAHLEASGFQTCVLTSDGRQARCMYDSWSNAGKAAGRAH-----GGAIDAVIEALK---AGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSSELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQTAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDP-----------------------------------------------------TEEEHGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRTEDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRPRGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLSMAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSPNDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLLSAQERAGHEEGETSVGFPKITHLTIVRDSERNG-----RSKGYGFVQFSEHQHAMQALRHMNNNPRL 662
            K+T SA E    KTLFVRNL  S T + LES FG IGPL+  F+V    S   C+GYG+VTF+ S+DA++A+T  D   L GRK+ +  A ++     +K   +   D +  E    P K+    K+N+  G  P   + LR +  G  +   +  K +G  +  S ++         +A   +D+  NA KA  + +     G +++A +   K   A +R++LI+RNL F+  E  L+  F     V  +++ PS    +H                               G+ FI++  V  A  A+  LN   I GR +AVD A+ + +Y+     Q +E   D++                                                         EE+                                      E+ +     ++T+ + G   RT+F RN+ FET V +L + + + FG ++   +V DP T  PRG+ FV FK  K A E   Q +  E  D             + GRKL + +AV R  A+ +K++     ++ +  D RNL LA  G I P ++ A+GL   D+ +R K +  K+ KL +NP  FIS+ RL VRNLP    +  L+QI+L +  +              KI+   I+RD  R       +S+GY F++F+EH+HA+ ALR  NNNP +
Sbjct:    1 KETTSAMEKHASKTLFVRNLPFSTTNDKLESLFGDIGPLKKCFVVKDKDSKHPCRGYGYVTFSMSDDAEKAQT--DVKSLDGRKLFVSFADRKI--DQKKKGKKQTGDGKEDETVISPAKDATKTKQNADKG--PKTFITLRHV--GKDVLRSDIAKILGKDIPVSQYE---FEEAENKAVVHFDTHKNAVKAFNKLNKKTIKGHSVEAGVGHGKPTVADKRSRLIIRNLSFKCKEDDLKEEFTKHGTVTEVKI-PSRPNGKHP------------------------------GFGFIQFQDVKKAAKAIEALNTKAIKGRPVAVDWAIPREKYIAVQEKQ-NEKTDDSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVEEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEV-ETPTHPKKTDVDDG---RTLFIRNISFETPVEKLEEMLSQ-FGEIEFCRLVIDPNTDHPRGSGFVKFKT-KDAMEQCLQQAEEEDMDG---------GITIDGRKLNMIVAVSRDKAQAIKAS----KKEKEPKDNRNLYLAREGMIRPGTQGAEGLDKTDLDKRMKVDAVKRQKL-KNPQIFISKTRLCVRNLPTSTGDTDLRQIYLKATGDNKA-----------KISECRIMRDLTRVNEKGVAKSRGYAFIEFTEHKHALAALRQTNNNPAI 654          
The following BLAST results are available for this feature:
BLAST of Gcaud1857.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG94_9FLOR1.930e-28655.53Putative RNA-binding protein n=1 Tax=Gracilariopsi... [more]
R7QA33_CHOCR1.110e-15542.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3EA36_9RHOD1.160e-7932.82Hypothetical protein n=8 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZIC8_9RHOD3.930e-7833.18Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YPM7_PORPP7.950e-6034.45RNA-binding protein 28 n=1 Tax=Porphyridium purpur... [more]
A0A4P9Z2L6_9FUNG2.790e-5128.55Uncharacterized protein n=1 Tax=Syncephalis pseudo... [more]
A9U4W9_PHYPA7.620e-5027.00Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
UPI0009E4F4667.050e-4929.76RNA-binding protein 28-like n=1 Tax=Orbicella fave... [more]
UPI001B88D14E2.520e-4826.20RNA-binding protein 28-like n=1 Tax=Gigantopelta a... [more]
A0A8J1XJ32_OWEFU4.550e-4827.75Ofus.G021787 protein (Fragment) n=1 Tax=Owenia fus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 19..92
e-value: 2.0E-18
score: 77.2
coord: 216..319
e-value: 4.2E-9
score: 46.2
coord: 410..485
e-value: 1.1E-9
score: 48.1
coord: 579..668
e-value: 6.7E-10
score: 48.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 411..472
e-value: 3.3E-9
score: 36.5
coord: 616..658
e-value: 4.5E-7
score: 29.6
coord: 20..89
e-value: 4.5E-15
score: 55.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 18..96
score: 15.681473
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 578..681
score: 14.214708
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 215..323
score: 11.144737
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 409..504
score: 14.726371
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 207..363
e-value: 3.1E-16
score: 61.6
coord: 1..134
e-value: 1.3E-22
score: 82.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 396..513
e-value: 1.6E-18
score: 68.6
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 536..704
e-value: 4.4E-17
score: 64.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 798..862
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..797
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 863..877
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 716..877
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..356
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 716..771
NoneNo IPR availablePANTHERPTHR48039:SF2RNA-BINDING PROTEIN 28coord: 286..785
NoneNo IPR availablePANTHERPTHR48039RNA-BINDING MOTIF PROTEIN 14Bcoord: 12..243
coord: 286..785
NoneNo IPR availablePANTHERPTHR48039:SF2RNA-BINDING PROTEIN 28coord: 12..243
NoneNo IPR availableCDDcd12416RRM4_RBM28_likecoord: 578..701
e-value: 4.74953E-28
score: 106.534
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 214..471
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 16..249
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 572..659

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1223_length_12420_cov_4.813286contigNODE_1223_length_12420_cov_4.813286:4280..6913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1857.t1Gcaud1857.t1Gracilaria caudata M_176_S67 malemRNANODE_1223_length_12420_cov_4.813286 4280..6913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1857.t1 ID=Gcaud1857.t1|Name=Gcaud1857.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=878bp
MKSATKQTRSAKESQDRKTLFVRNLHESVTKENLESHFGGIGPLRHAFLV
TTPGSDFCKGYGFVTFAFSEDADRARTVLDQSLLKGRKISLDIARKRFRS
SNEKPDDRTQQDKQSKEASAQPRKEKKNSAHGSVPMRTVLLRKLSPGDTL
TEEEAKKAVGAHLEASGFQTCVLTSDGRQARCMYDSWSNAGKAAGRAHGG
AIDAVIEALKAGQRTKLIVRNLPFRVDELQLRAAFEAIAPVRSLRLAPSS
ELRRHDTHRAKKQASDSRAGKDNNAGKSESSFVPCAGYAFIEYFLVAHAQ
TAVRTLNATKIGGRVIAVDMAVSKSQYVTQNPSQEHENASDASDDPTEEE
HGQNGQTEKESSASGLAIENLRPVSPEEMKKHKSRSEQELNDQKPRQRRT
EDEKGELRRTVFFRNVLFETSVHELRKAVEERFGNVQKVLIVKDPTTGRP
RGTAFVIFKDEKTAREAVRQTSASESGDAEHLPTTAPADFVLHGRKLLLS
MAVDRSTAKDLKSTIPLHTRKNQDADPRNLRLAWVGHIAPDSKQAKGLSP
NDVSRRAKAEKEKQTKLERNPNAFISEVRLSVRNLPRECDEKALKQIFLL
SAQERAGHEEGETSVGFPKITHLTIVRDSERNGRSKGYGFVQFSEHQHAM
QALRHMNNNPRLIEWIIQKKPKPLRIDDTRAELMRKQWRNRRLIVEFAVE
DKRIVQVLDRVREKGKQQVTKKRKKADSDGQELPKRKKSKQAVEDKPAKN
DNEPTADDPKYLNDTSQSRSERRFRHKRKQLSSTQSTNMTRSHNGRSEAS
DGPAHMEKIGRKLSKETQVGKDKKKRSKRTAQDVKFDHLVDKYRKKIANV
GGKPRSDSVNKHQKNETGPSVRWFETS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf