Gcaud7262.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7262.t1
Unique NameGcaud7262.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length302
Homology
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A2V3IYB8_9FLOR (Poly(A)-specific ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB8_9FLOR)

HSP 1 Score: 476 bits (1226), Expect = 6.170e-168
Identity = 234/296 (79.05%), Postives = 255/296 (86.15%), Query Frame = 0
Query:    1 MARTSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLGMTTKSYGDQRPTSLSPMYTTPRKALPGTDNSNGNNEGAA 296
            MAR  RIRQVWASNLE+EIL L +LS+ Y HIAMDTEFPGVVLRPIG QAT PDA YCTHRLN DLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLS+DMYAQDSIELL ASGIDFAEHE+NGIDVLTFGELI SSGLVLNPR++W+ FSGGYDFCYLIK+LTA+PLPEQEA FFEYL LFFP +YDLKYL LS+DRL+GGLNKVAE LGCER G MHQAGSDSLLTLDV+FKM+EQVF+GVID S  G+LY LGM  K      P S SP +T PRKA+ GTD SNG+  G +
Sbjct:    1 MARVPRIRQVWASNLEEEILLLCELSETYTHIAMDTEFPGVVLRPIGQQATTPDAAYCTHRLNADLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSSDMYAQDSIELLSASGIDFAEHERNGIDVLTFGELIISSGLVLNPRITWVTFSGGYDFCYLIKVLTAIPLPEQEAEFFEYLHLFFPCLYDLKYLMLSTDRLYGGLNKVAETLGCERIGNMHQAGSDSLLTLDVYFKMREQVFNGVIDASKNGVLYTLGMGMKDSVGNLPPSSSPTFT-PRKAIAGTDGSNGSGNGTS 295          
BLAST of Gcaud7262.t1 vs. uniprot
Match: M2W4R8_GALSU (Poly(A)-specific ribonuclease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4R8_GALSU)

HSP 1 Score: 325 bits (833), Expect = 4.010e-108
Identity = 162/285 (56.84%), Postives = 200/285 (70.18%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMTTKSYGDQRPTSLSPMYTTPRKALPGTDNSNG 290
            I++VWA NLE+E+  +S + D YN +AMDTEFPGVV RPIGS  +  D  Y T R NVDLLKIIQLG+S +  +G  PE C  WQFNF FSL+ D+YAQDSI+LL  SGIDF EHE++GIDV  FGEL+ SSG+VLN  + WI F  GYDF YL+K+LT   +P +E+ FFE L+ +FPR YD+KYL ++SDRL+GGLNK+AE+L  ER G MHQAGSDSLLT+ VFFKMKE +F G ID+   CG+LY LG                 YT       GT+N+NG
Sbjct:   11 IKEVWAENLEKELANISSILDKYNFVAMDTEFPGVVARPIGSFRSNTDYHYQTLRCNVDLLKIIQLGLSFSDSEGNIPEGCACWQFNFRFSLNEDIYAQDSIDLLTRSGIDFDEHERHGIDVERFGELLISSGIVLNEDICWISFHSGYDFGYLLKILTCSEMPAEESEFFELLNTYFPRFYDMKYLMMASDRLYGGLNKLAEILEVERVGQMHQAGSDSLLTMKVFFKMKESIFSGQIDERRYCGVLYGLGSAAAFGHASHEAERRYNYTNNEN---GTNNNNG 292          
BLAST of Gcaud7262.t1 vs. uniprot
Match: UPI001E1D4D66 (CCR4-NOT transcription complex subunit 7-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4D66)

HSP 1 Score: 317 bits (813), Expect = 1.520e-105
Identity = 163/272 (59.93%), Postives = 194/272 (71.32%), Query Frame = 0
Query:    6 RIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLGMT-----TKSYGDQRPTSLS 272
            RI  VWA NL  E+ ++  L+D YNH+A+DTEFPGVV+RP+G+ A   D  Y T R NVDLL+IIQLGISL+  DG+ P E   WQFNF FSL  DMYAQDSIELL  SGI+FAEHE+NGI    F EL+TSSGLVLN  + WI F GGYDF YL+K+LTA  LP  E+ FFE L L+FP+ YD+KYL  S + L GGLNK+AE  GCER G+MHQAGSDSLLTL VFF+M  + F G ID+S  GILY LG+      T  + D RP + S
Sbjct:    4 RIVDVWAHNLAAEMDRICALADTYNHVALDTEFPGVVVRPVGA-AQAVDIHYQTLRCNVDLLRIIQLGISLSNADGEGPSEVACWQFNFEFSLEQDMYAQDSIELLTKSGINFAEHERNGIAPNDFAELLTSSGLVLNDGMKWISFHGGYDFGYLLKVLTASDLPTAESEFFELLELYFPQKYDMKYLMRSRENLFGGLNKLAETYGCERVGSMHQAGSDSLLTLHVFFRMMRETFGGAIDESLEGILYGLGVASDIAPTPVHDDSRPLAAS 274          
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A1X6NJJ6_PORUM (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJJ6_PORUM)

HSP 1 Score: 305 bits (781), Expect = 4.570e-100
Identity = 141/256 (55.08%), Postives = 196/256 (76.56%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLGMTTKS 262
            IR+VWA NL +E+  +S++ + YNHIA+DTEFPGVV RP+G+  +  D  Y T R+NVDLLKIIQLG++ + E+G  PE+   WQFNF FSL++D+YA D+IELL  +GIDF++HE++GIDV  FGEL+TSSG+VLN  V+W+ F  G+DF YL+K+LT+ PLP  E+ F + L+ +FPR+YD+KYL L+SD+L+GGLNK+AE+   +R G+MHQAGSDSL+TL VF +MKE+ F G +     GIL+ +G  + +
Sbjct:    6 IREVWAGNLAEEMEAISEVVERYNHIALDTEFPGVVARPVGAAGS--DYQYQTLRVNVDLLKIIQLGLTFSDEEGNMPEDVQCWQFNFHFSLASDIYAADAIELLTQAGIDFSQHERHGIDVAEFGELLTSSGVVLNEDVTWVSFHSGFDFGYLLKVLTSCPLPAAESDFLDLLATYFPRVYDMKYLMLASDKLYGGLNKLAEIYHVDRTGSMHQAGSDSLVTLHVFLRMKEETFRGAVPVPLVGILFGIGSASST 259          
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A5J4YRQ4_PORPP (Poly(A)-specific ribonuclease n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRQ4_PORPP)

HSP 1 Score: 296 bits (759), Expect = 6.610e-97
Identity = 143/252 (56.75%), Postives = 183/252 (72.62%), Query Frame = 0
Query:    6 RIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNCGILYNLG 257
            +IR VW SNLE+E++ +S + + Y+H+AMDTEFPGVV RP+G      D  Y T R NVDLLKIIQLG++ A EDG   E+C  WQFNF FSL +DMYAQDSI+LL  SGIDF + E++GIDVL FGEL+  SGLVLN  V+WI F   +DF YLIK+LT   LP  E+ FFE + L+FPR++D+KYL   +DR +GGL+K+AE+   +R+G MHQAGSDSLLTL+VFF+++   F G +      ILY LG
Sbjct:    4 QIRDVWESNLEEEMMVISGVLEKYSHVAMDTEFPGVVARPVGGFRNSSDYQYQTLRCNVDLLKIIQLGLAFADEDGNLAEDCPCWQFNFKFSLQDDMYAQDSIDLLTQSGIDFEQFERDGIDVLHFGELLIGSGLVLNDNVTWISFHSSFDFGYLIKVLTCSNLPSDESEFFELMQLYFPRLWDMKYLL--TDRFYGGLSKLAEVYEVKRYGKMHQAGSDSLLTLEVFFRVRASTFQGHVHKDMMNILYGLG 253          
BLAST of Gcaud7262.t1 vs. uniprot
Match: L8GRD9_ACACA (Poly(A)-specific ribonuclease n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRD9_ACACA)

HSP 1 Score: 292 bits (747), Expect = 1.610e-95
Identity = 146/259 (56.37%), Postives = 180/259 (69.50%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMTTKSYG 264
            IR+VWA NLE+E+  + D+ + Y +IAMDTEFPG+V RPIG+  +  +  Y T R NVDLLKIIQLG++    +G+ P    TWQFNF FSL+ DMYAQDSI+LL  SGI+F  HE++G+DV  FGEL+TSSG+VL+ R+ WI F  GYDF YL+K+LT  PLP QE  FFE L  +FP IYD+KYL  S   L GGLN++A  L  ER G  HQAGSDSLLT   FFKMK   F   +DDS   G+LY LG   K+ G
Sbjct:   12 IREVWAENLEEEMAHIRDIVEDYPYIAMDTEFPGIVARPIGNFKSPSEYHYQTLRCNVDLLKIIQLGLTFTDGEGRLPPGVATWQFNFKFSLTEDMYAQDSIDLLTRSGINFKRHEEHGVDVSHFGELLTSSGIVLDDRIKWISFHSGYDFGYLLKILTCKPLPAQEEEFFELLLAYFPCIYDIKYLMKSCKSLKGGLNELANDLEVERIGPQHQAGSDSLLTSATFFKMKRMFFENNLDDSKFLGVLYGLGHPYKAGG 270          
BLAST of Gcaud7262.t1 vs. uniprot
Match: F4Q733_CAVFA (Poly(A)-specific ribonuclease n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q733_CAVFA)

HSP 1 Score: 293 bits (750), Expect = 3.630e-94
Identity = 144/254 (56.69%), Postives = 181/254 (71.26%), Query Frame = 0
Query:    4 TSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNC-GILYNL 256
            T  IR+VWA NLE+E+  + +L D YN+IAMDTEFPG+V RP+GS  T  D  Y T RLNVDLLKIIQLG++ +  DG       TWQFNF F+L+ DMYAQDSI+LL  SGI+F ++E+NGIDVL FG+L+ SSG+VLN ++ WI F  GYDF YLIK+LT   LP++E  FF+ +  +FP IYD+KYL  S   L GGL+++AE L  +R G  HQAGSDSLLT   FFK+++  F   IDDS   GILY L
Sbjct:   11 TDEIREVWAHNLEEEMALIRELVDDYNYIAMDTEFPGIVTRPVGSFRTPSDYHYQTLRLNVDLLKIIQLGLTFSDSDGNLASNTCTWQFNFKFNLNEDMYAQDSIDLLSRSGIEFKKNEENGIDVLDFGDLLMSSGIVLNEKIKWISFHSGYDFGYLIKVLTCTALPQEEPEFFDLVRTYFPCIYDIKYLMKSCKNLKGGLSELAEDLDIKRIGPQHQAGSDSLLTCTTFFKLRKMYFENQIDDSKYQGILYGL 264          
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A5M3MQ76_CONPW (Poly(A)-specific ribonuclease n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MQ76_CONPW)

HSP 1 Score: 292 bits (747), Expect = 3.840e-94
Identity = 149/259 (57.53%), Postives = 179/259 (69.11%), Query Frame = 0
Query:    5 SRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMTTKS 262
            SRIR VW+ NLE E+  + DL D Y +IAMDTEFPGVV RPIGS  T  D  Y T R NVDLL+IIQ+GI+LA E+G  P++  TWQFNF FSL+ DMYA +SIELL+ SG DFA HE+ GID   F EL+ +SGLVLNP V W+ F  GYDF Y +KLLTA  LP  E  FF+ L+++FP +YD+K++  +   L GGL  +A+ LG  R GT HQAGSDSLLT  VFFKM+E  F   IDD    G LY LG T  S
Sbjct:    2 SRIRDVWSVNLEAEMRTIRDLVDSYPYIAMDTEFPGVVARPIGSFKTSSDYHYQTMRCNVDLLRIIQVGITLADEEGSFPQDAATWQFNFRFSLATDMYAPESIELLQKSGFDFARHEEYGIDPNDFAELMITSGLVLNPDVKWLSFHSGYDFGYYVKLLTAQSLPSAEDVFFDELNMWFPHVYDIKFMMRACKSLKGGLQDIADDLGVLRIGTSHQAGSDSLLTASVFFKMRELFFEDQIDDDEYSGKLYGLGQTFTS 260          
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A4P9Z628_9FUNG (Poly(A)-specific ribonuclease n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z628_9FUNG)

HSP 1 Score: 287 bits (734), Expect = 7.200e-94
Identity = 145/248 (58.47%), Postives = 170/248 (68.55%), Query Frame = 0
Query:    1 MARTSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDS 248
            M  +  IR+VWA NLE E+  L DL + Y ++AMDTEFPGVV RPIGS  T  D  Y T R NVDLLKIIQLG++ A E G+ P    TWQF+F FSL++DMYAQDSI+LL  SGIDF  HE+ GIDV  FGEL+ SSG VL   V WI F  GYDF YL+K+LT  PLP +E GFF  L L+FP IYD+KYL  S   L GGL  VA+ L  +R G  HQAGSDSLLT   FFKM++  F   IDD+
Sbjct:    3 MQESKYIREVWADNLESEMALLRDLVEHYPYLAMDTEFPGVVARPIGSFRTASDYHYQTLRCNVDLLKIIQLGLTFANEQGEMPPGAATWQFHFKFSLADDMYAQDSIDLLAKSGIDFKRHEERGIDVHLFGELLISSGFVLTRDVRWISFHSGYDFGYLLKVLTCSPLPAEEVGFFSLLHLYFPCIYDIKYLMKSCKNLKGGLQDVADDLQVQRVGPQHQAGSDSLLTCTTFFKMRQMFFADQIDDA 250          
BLAST of Gcaud7262.t1 vs. uniprot
Match: A0A139AW06_GONPJ (Poly(A)-specific ribonuclease n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AW06_GONPJ)

HSP 1 Score: 288 bits (738), Expect = 7.460e-94
Identity = 147/254 (57.87%), Postives = 178/254 (70.08%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQATQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSNDMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWICFSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRLHGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSN-CGILYNLGMT 259
            IR VWASNLE+E+  + D+ + Y +IAMDTEFPGVV RPIG+  T  D  Y T R NVDLL++IQLG++ A E+G  PE   TWQFNF F+L +DMYAQDSI+LL  SGIDF  HE+ GIDV  FGEL+T+SGLVL   V WI F  GYDF YL+K+LT+  LP +EA FFE L ++FP IYD+KYL  S   L GGL  VA+ L  +R G  HQAGSD+LLT   FFKM++  F   IDD+   G LY LG T
Sbjct:    8 IRDVWASNLEEEMAAIRDMVEKYPYIAMDTEFPGVVARPIGTFKTSADYHYQTLRCNVDLLRLIQLGVTCADEEGNLPEGVCTWQFNFKFNLQDDMYAQDSIDLLTKSGIDFKRHEEYGIDVDHFGELLTTSGLVLFDDVKWISFHSGYDFGYLLKVLTSQTLPAEEADFFELLRMYFPCIYDIKYLMKSCKNLKGGLQDVADELQVQRIGPQHQAGSDALLTCRTFFKMRQLFFEDNIDDARFLGFLYGLGGT 261          
The following BLAST results are available for this feature:
BLAST of Gcaud7262.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYB8_9FLOR6.170e-16879.05Poly(A)-specific ribonuclease n=1 Tax=Gracilariops... [more]
M2W4R8_GALSU4.010e-10856.84Poly(A)-specific ribonuclease n=1 Tax=Galdieria su... [more]
UPI001E1D4D661.520e-10559.93CCR4-NOT transcription complex subunit 7-like n=1 ... [more]
A0A1X6NJJ6_PORUM4.570e-10055.08Poly(A)-specific ribonuclease (Fragment) n=1 Tax=P... [more]
A0A5J4YRQ4_PORPP6.610e-9756.75Poly(A)-specific ribonuclease n=1 Tax=Porphyridium... [more]
L8GRD9_ACACA1.610e-9556.37Poly(A)-specific ribonuclease n=1 Tax=Acanthamoeba... [more]
F4Q733_CAVFA3.630e-9456.69Poly(A)-specific ribonuclease n=1 Tax=Cavenderia f... [more]
A0A5M3MQ76_CONPW3.840e-9457.53Poly(A)-specific ribonuclease n=1 Tax=Coniophora p... [more]
A0A4P9Z628_9FUNG7.200e-9458.47Poly(A)-specific ribonuclease n=1 Tax=Syncephalis ... [more]
A0A139AW06_GONPJ7.460e-9457.87Poly(A)-specific ribonuclease n=1 Tax=Gonapodya pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 6..256
e-value: 3.8E-87
score: 293.6
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 10..127
e-value: 1.5E-9
score: 37.6
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 149..195
e-value: 1.8E-5
score: 24.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..301
NoneNo IPR availablePANTHERPTHR10797:SF0POP2, ISOFORM Ecoord: 5..261
IPR039637CCR4-NOT transcription complex subunit 7/8/Pop2PANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 5..261
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..248

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_86_length_54060_cov_4.498935contigNODE_86_length_54060_cov_4.498935:51116..52021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7262.t1Gcaud7262.t1Gracilaria caudata M_176_S67 malemRNANODE_86_length_54060_cov_4.498935 51116..52021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7262.t1 ID=Gcaud7262.t1|Name=Gcaud7262.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=302bp
MARTSRIRQVWASNLEQEILKLSDLSDIYNHIAMDTEFPGVVLRPIGSQA
TQPDALYCTHRLNVDLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSN
DMYAQDSIELLRASGIDFAEHEKNGIDVLTFGELITSSGLVLNPRVSWIC
FSGGYDFCYLIKLLTAVPLPEQEAGFFEYLSLFFPRIYDLKYLTLSSDRL
HGGLNKVAEMLGCERFGTMHQAGSDSLLTLDVFFKMKEQVFHGVIDDSNC
GILYNLGMTTKSYGDQRPTSLSPMYTTPRKALPGTDNSNGNNEGAALSSS
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR006941RNase_CAF1
IPR039637CNOT7/CNOT8/Pop2
IPR012337RNaseH-like_sf