Gcaud3645.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud3645.t1
Unique Name	Gcaud3645.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	150

Homology

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BLAST of Gcaud3645.t1 vs. uniprot
Match: A0A2V3IPD2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPD2_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 1.440e-32
Identity = 67/129 (51.94%), Postives = 85/129 (65.89%), Query Frame = 0

Query:   10 ARSCDGTDGQSFPQDNVIRWRSGMFREAVDQFSVVFESAADGRLSFVALDDDFESQSESGAIRMIALNVTDEIEAYVRETGTALCAEDVVCDDG-GLGAWIIFAIAAGSIAVVVCAIVVALLFRKKKSR 137
            ++ CDGTDG+SFP +NVI WRSG   E VD+ +V  ES  +GRL+FV LDD F+SQ E+G +R    NVT E+E Y RE GT LC   +VC +  GL  WIIF I AG+I  +V AIV A   ++K  R
Sbjct:  147 SKKCDGTDGKSFPNNNVIVWRSGEIEEGVDRLNVRMES--EGRLNFVGLDDQFDSQKENGVLRATTTNVTGEVEFYARERGTPLCERKLVCKESRGLRPWIIFLIVAGAILALVAAIVAAWFAKRKFGR 273

The following BLAST results are available for this feature:

BLAST of Gcaud3645.t1 vs. uniprot

BLAST of Gcaud3645.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IPD2_9FLOR	1.440e-32	51.94	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..104
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 132..149
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 105..131
None	No IPR available	TMHMM	TMhelix		coord: 109..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_120_length_47600_cov_4.363763	contig	NODE_120_length_47600_cov_4.363763:29859..30472 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud3645.t1	Gcaud3645.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_120_length_47600_cov_4.363763 29859..30472 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud3645.t1 ID=Gcaud3645.t1|Name=Gcaud3645.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=150bp
MFTDSPIFKARSCDGTDGQSFPQDNVIRWRSGMFREAVDQFSVVFESAAD
GRLSFVALDDDFESQSESGAIRMIALNVTDEIEAYVRETGTALCAEDVVC
DDGGLGAWIIFAIAAGSIAVVVCAIVVALLFRKKKSRSRVVANVDSDTP*