Gcaud2062.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2062.t1
Unique NameGcaud2062.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length273
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2062.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004045Glutathione S-transferase, N-terminalPFAMPF13417GST_N_3coord: 7..75
e-value: 3.7E-6
score: 27.1
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..109
e-value: 1.0E-11
score: 47.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16
NoneNo IPR availableCDDcd00570GST_N_familycoord: 7..70
e-value: 2.75456E-6
score: 42.1737
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 5..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_856_length_16975_cov_4.345238contigNODE_856_length_16975_cov_4.345238:4215..5033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2062.t1Gcaud2062.t1Gracilaria caudata M_176_S67 malemRNANODE_856_length_16975_cov_4.345238 4215..5033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2062.t1 ID=Gcaud2062.t1|Name=Gcaud2062.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=273bp
MTPDINLLVLPGSLFCTKVMCALHYLELPFSLTSVPPTKLKKQLPAPHLV
PVMKYNTQLIADSARILHFLHRHHAHPTRPLYPQVSAGAAKHWSSVAELE
QFAHDNLSMLYYYFGGISRHGIQHVTKPFITRVMPKPLVTVLPFVPGVAA
RAGASALRRRVAPLLGADTIASDAAAKSALFASLRKLDACFENEQQRYFF
GTAGPTAADFGVFAALKRLLHPIPEISAQLSGGYPHCLRDAGGLSRLQAF
FDRMDEQFYRGKIDWSSVPLKL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR036249Thioredoxin-like_sf