Gcaud1719.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1719.t1
Unique NameGcaud1719.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length116
Homology
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A2V3IZ58_9FLOR (Protein translation factor SUI1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ58_9FLOR)

HSP 1 Score: 216 bits (550), Expect = 5.460e-71
Identity = 106/115 (92.17%), Postives = 110/115 (95.65%), Query Frame = 0
Query:    1 MNNEKALLGGVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            MN E+ALLGGV APFDPFADADGDDQVVTKG VHIRLQQRNGRKSLTT+QGLDDKLDLAKLTKAFKK FCCNGCVVDNAELGKVIQLQGDQREKVK FL+DE+IASKSMIKVHGI
Sbjct:    1 MNTEQALLGGVAAPFDPFADADGDDQVVTKGFVHIRLQQRNGRKSLTTVQGLDDKLDLAKLTKAFKKEFCCNGCVVDNAELGKVIQLQGDQREKVKAFLADEQIASKSMIKVHGI 115          
BLAST of Gcaud1719.t1 vs. uniprot
Match: R7QJC0_CHOCR (Translation initiation factor eIF1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJC0_CHOCR)

HSP 1 Score: 196 bits (497), Expect = 6.400e-63
Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 0
Query:    4 EKALLGGVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            + + L GV+APFDPFADADGDD VVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKK FCCNGCVVDN ELGKVIQLQGDQREKVK FL++E IA+  MIKVHGI
Sbjct:    3 DNSALAGVSAPFDPFADADGDDAVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKEFCCNGCVVDNKELGKVIQLQGDQREKVKSFLTEEDIAASRMIKVHGI 114          
BLAST of Gcaud1719.t1 vs. uniprot
Match: Q7XZ68_GRIJA (Protein translation factor n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ68_GRIJA)

HSP 1 Score: 192 bits (487), Expect = 2.080e-61
Identity = 96/115 (83.48%), Postives = 105/115 (91.30%), Query Frame = 0
Query:    1 MNNEKALLGGVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            M+N +  L GV APFDPFADA GDD+VVTKGIVHIRLQQRNGRKSLTTIQGLD+KLDLA+LTKAFKK FCCNGCVVDN ELGKV+QLQGDQREKVK FL++E+IASK MIKVHGI
Sbjct:    1 MSNNQ--LEGVVAPFDPFADAAGDDEVVTKGIVHIRLQQRNGRKSLTTIQGLDEKLDLAELTKAFKKEFCCNGCVVDNKELGKVVQLQGDQREKVKNFLAEEEIASKRMIKVHGI 113          
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A1X6NX29_PORUM (SUI1 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NX29_PORUM)

HSP 1 Score: 176 bits (445), Expect = 5.260e-55
Identity = 87/110 (79.09%), Postives = 95/110 (86.36%), Query Frame = 0
Query:    6 ALLGGVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            A L     PFDPFADA+GDDQVVTKGIVHIRLQQRNGRKSLTTIQGL+  LDLAKLTKAFKK FCCNGCVVD+ ELG+VIQLQGDQR KV  FL +E+IA+K MIK+HGI
Sbjct:    4 AELSATFTPFDPFADAEGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLNSSLDLAKLTKAFKKEFCCNGCVVDDKELGRVIQLQGDQRNKVTLFLVEEEIAAKKMIKIHGI 113          
BLAST of Gcaud1719.t1 vs. uniprot
Match: M2XM28_GALSU (Protein translation factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XM28_GALSU)

HSP 1 Score: 168 bits (426), Expect = 4.400e-52
Identity = 84/114 (73.68%), Postives = 94/114 (82.46%), Query Frame = 0
Query:    3 NEKALLGGVTAPFDPFADAD-GDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            N  ++  G+ APFDPFADA  G+D  VTK IVHIRLQQRNGRK LTTIQGLD KLDL K+TKAFKK FCCNGCVVD+ ELG+VIQLQGDQR+KVK FL  EK+A K +IKVHGI
Sbjct:    2 NFDSIQTGINAPFDPFADASRGEDAAVTKNIVHIRLQQRNGRKCLTTIQGLDTKLDLNKITKAFKKEFCCNGCVVDDTELGRVIQLQGDQRDKVKKFLVHEKLAEKDLIKVHGI 115          
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A7S2Z9F9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9F9_9RHOD)

HSP 1 Score: 158 bits (399), Expect = 5.210e-48
Identity = 79/115 (68.70%), Postives = 94/115 (81.74%), Query Frame = 0
Query:    1 MNNEKALLGGVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            MN+ +  L G     DPFA+A+  D V+TKG+VHIRLQQRNGRKSLTT+QGLD+K+ L KLTKAFKK FCCNGCVVD+ ELG+VIQLQGDQRE V+ F+ +EK+ASK  IKVHGI
Sbjct:    1 MNDLELNLPGAN---DPFAEAERGDDVLTKGLVHIRLQQRNGRKSLTTVQGLDEKIKLEKLTKAFKKEFCCNGCVVDDQELGRVIQLQGDQRENVRKFIVNEKLASKKNIKVHGI 112          
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A7S1TLC9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLC9_9RHOD)

HSP 1 Score: 157 bits (397), Expect = 1.050e-47
Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0
Query:   15 FDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            FDPFADAD  ++VVTKGIVH+R+QQRNGRKSLTTIQGLD KLDL KLTKAFKK FCCNG VV++ ELG+VIQLQGDQRE V+ FL  E+IASK+ IKVHGI
Sbjct:   12 FDPFADADTGEEVVTKGIVHLRIQQRNGRKSLTTIQGLDAKLDLEKLTKAFKKEFCCNGNVVNDKELGRVIQLQGDQRENVRKFLIAEEIASKTKIKVHGI 112          
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A7J7IQ90_9RHOD (Translation INITIATION FACTOR n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IQ90_9RHOD)

HSP 1 Score: 156 bits (394), Expect = 3.110e-47
Identity = 76/106 (71.70%), Postives = 88/106 (83.02%), Query Frame = 0
Query:   10 GVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            GVT PFDPFADAD D  VVTK +VHIRLQ RNGRKSLTTIQGL  K+DL KLTKAFKK FCCNG +V++ ELG+VIQLQGDQRE V+ FL +E++  K+ IKVHG+
Sbjct:    8 GVTKPFDPFADADTDSGVVTKNLVHIRLQMRNGRKSLTTIQGLSGKIDLNKLTKAFKKEFCCNGSIVEDKELGRVIQLQGDQRENVRRFLIEEELVDKNNIKVHGM 113          
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A5J4YKI8_PORPP (Protein translation factor SUI1-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKI8_PORPP)

HSP 1 Score: 135 bits (340), Expect = 8.950e-39
Identity = 77/132 (58.33%), Postives = 88/132 (66.67%), Query Frame = 0
Query:    1 MNNEKALLGGVTAPFDPFADAD-GDDQVVT----------------KGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHGI 115
            MN E    G     FDPFADA+  DD  V                   ++H+R+QQRNGRKSLTTIQGLD KLDL KL KAFKK FCCNG VV++A LG+VIQLQGDQRE V+ FL +E+IA K MIKVHGI
Sbjct:    4 MNEEFVPAGH----FDPFADAELADDNGVAPANANGGGAAGVTAKKSNLIHLRIQQRNGRKSLTTIQGLDKKLDLEKLMKAFKKEFCCNGNVVEDATLGRVIQLQGDQRENVRKFLVEEEIADKKMIKVHGI 131          
BLAST of Gcaud1719.t1 vs. uniprot
Match: A0A7S3UFN2_9CHLO (Hypothetical protein n=2 Tax=Viridiplantae TaxID=33090 RepID=A0A7S3UFN2_9CHLO)

HSP 1 Score: 134 bits (337), Expect = 1.950e-38
Identity = 63/109 (57.80%), Postives = 85/109 (77.98%), Query Frame = 0
Query:    8 LGGVTAPFDPFADADGDDQVVT--KGIVHIRLQQRNGRKSLTTIQGLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLSDEKIASKSMIKVHG 114
            +G + A FDPFA+A G+D  V   K  VH+R+QQRNGRKSLTT+QG+ +K   +K+ K+ KK +CCNGCVV++AELG+VIQLQGDQR+ V+ FL++ KI  K +IK+HG
Sbjct:   13 IGNLGATFDPFAEAAGEDTSVAANKDYVHVRVQQRNGRKSLTTVQGIPEKYGKSKILKSLKKTYCCNGCVVEDAELGQVIQLQGDQRKNVQEFLTESKIVKKDLIKLHG 121          
The following BLAST results are available for this feature:
BLAST of Gcaud1719.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ58_9FLOR5.460e-7192.17Protein translation factor SUI1-like n=1 Tax=Graci... [more]
R7QJC0_CHOCR6.400e-6385.71Translation initiation factor eIF1 n=1 Tax=Chondru... [more]
Q7XZ68_GRIJA2.080e-6183.48Protein translation factor n=1 Tax=Griffithsia jap... [more]
A0A1X6NX29_PORUM5.260e-5579.09SUI1 domain-containing protein n=1 Tax=Porphyra um... [more]
M2XM28_GALSU4.400e-5273.68Protein translation factor n=1 Tax=Galdieria sulph... [more]
A0A7S2Z9F9_9RHOD5.210e-4868.70Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TLC9_9RHOD1.050e-4778.22Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7J7IQ90_9RHOD3.110e-4771.70Translation INITIATION FACTOR n=2 Tax=Cyanidiaceae... [more]
A0A5J4YKI8_PORPP8.950e-3958.33Protein translation factor SUI1-like n=1 Tax=Porph... [more]
A0A7S3UFN2_9CHLO1.950e-3857.80Hypothetical protein n=2 Tax=Viridiplantae TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.780.10coord: 5..115
e-value: 2.7E-40
score: 139.5
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 14..114
NoneNo IPR availablePANTHERPTHR10388:SF4EUKARYOTIC TRANSLATION INITIATION FACTOR EIF1coord: 14..114
IPR005874Eukaryotic translation initiation factor SUI1TIGRFAMTIGR01160TIGR01160coord: 14..115
e-value: 1.3E-43
score: 146.0
IPR005874Eukaryotic translation initiation factor SUI1PIRSFPIRSF004499Transl_init_SUI1_Eukcoord: 4..115
e-value: 2.1E-44
score: 148.3
IPR005874Eukaryotic translation initiation factor SUI1CDDcd11566eIF1_SUI1coord: 31..114
e-value: 5.93383E-47
score: 143.829
IPR001950SUI1 domainPFAMPF01253SUI1coord: 31..103
e-value: 6.1E-24
score: 84.3
IPR001950SUI1 domainPROSITEPS50296SUI1coord: 33..103
score: 22.33666
IPR036877SUI1 domain superfamilySUPERFAMILY55159eIF1-likecoord: 14..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_849_length_17037_cov_4.361560contigNODE_849_length_17037_cov_4.361560:7481..7828 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1719.t1Gcaud1719.t1Gracilaria caudata M_176_S67 malemRNANODE_849_length_17037_cov_4.361560 7481..7828 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1719.t1 ID=Gcaud1719.t1|Name=Gcaud1719.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=116bp
MNNEKALLGGVTAPFDPFADADGDDQVVTKGIVHIRLQQRNGRKSLTTIQ
GLDDKLDLAKLTKAFKKVFCCNGCVVDNAELGKVIQLQGDQREKVKGFLS
DEKIASKSMIKVHGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005874SUI1_euk
IPR001950SUI1
IPR036877SUI1_dom_sf