Gcaud9841.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9841.t1
Unique NameGcaud9841.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length154
Homology
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BLAST of Gcaud9841.t1 vs. uniprot
Match: A0A2V3J4F2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4F2_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 9.260e-38
Identity = 69/150 (46.00%), Postives = 100/150 (66.67%), Query Frame = 0 
Query:    4 DKRIAYAIAAVSAAGVGFGTAYYLYRAQRKSSDLVTLQVRIEKYHEEYLQQVAXXXXXXXXXXXXXXXXXHCMQ-ATSDDPTDELIFKTVRCNSCGKKEKIAFEALLARDQAQFITAMIAKHDIGGGEEKVVRILLEYCINELDDALIFA 152
            +++I  AIA  +AAGVGF TAYYLYR + ++S + ++ +RIE YH+ YLQ  A                 +C+  ++S   +++ IF  VRCNSCGKKEKIA+EAL+   Q  F+  ++A ++I  G+EK VRI+LEYCINE++DA+IFA
Sbjct:   37 NRKITLAIAGAAAAGVGFATAYYLYR-KTQASQITSVPIRIETYHQSYLQASAATYTQGDQQEALRRIIAYCINISSSSSESEQTIFTNVRCNSCGKKEKIAYEALITNAQLDFVNRVMATYNIDAGQEKAVRIMLEYCINEVEDAVIFA 185
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BLAST of Gcaud9841.t1 vs. uniprot
Match: R7QEQ9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEQ9_CHOCR)

HSP 1 Score: 93.6 bits (231), Expect = 2.140e-21
Identity = 55/152 (36.18%), Postives = 78/152 (51.32%), Query Frame = 0 
Query:    4 DKRIAYAIAAVSAAGV-GFGTAYYLY-RAQRKSSDLVTLQVRIEKYHEEYLQQVAXXXXXXXXXXXXXXXXXHCMQATSDDPTDELIFKTVRCNSCGKKEKIAFEALLARDQAQFITAMIAKHDIGGGEEKVVRILLEYCINELDDALIFAQ 153
            DKR+   IA +  A V G G AYYLY R    S + + +++ +E    E+L  V+                 HC  A+ D    E IFK VRCNSCGKKEK+ F   L + Q  F+     K++I  G +K +R++LEY IN+  ++ IF  
Sbjct:    6 DKRVT--IALIGTASVCGAGLAYYLYNRHFHSSEESIEIELNLESAQLEWLGTVSDKYTDGDVAIAMKKVVDHCQVASEDPKAAETIFKKVRCNSCGKKEKLPFTVSLLQKQVDFLGDAAKKYEITAGNDKCMRVMLEYAINDAQESSIFGD 155
The following BLAST results are available for this feature:
BLAST of Gcaud9841.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4F2_9FLOR9.260e-3846.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QEQ9_CHOCR2.140e-2136.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_794_length_17858_cov_4.718298contigNODE_794_length_17858_cov_4.718298:3320..3781 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9841.t1Gcaud9841.t1Gracilaria caudata M_176_S67 malemRNANODE_794_length_17858_cov_4.718298 3320..3781 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9841.t1 ID=Gcaud9841.t1|Name=Gcaud9841.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=154bp
MPFDKRIAYAIAAVSAAGVGFGTAYYLYRAQRKSSDLVTLQVRIEKYHEE
YLQQVAEKYTQQDVQKALQTIMQHCMQATSDDPTDELIFKTVRCNSCGKK
EKIAFEALLARDQAQFITAMIAKHDIGGGEEKVVRILLEYCINELDDALI
FAQ*
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