Gcaud2149.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2149.t1
Unique NameGcaud2149.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length843
Homology
BLAST of Gcaud2149.t1 vs. uniprot
Match: A0A0L0D4E5_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D4E5_THETB)

HSP 1 Score: 120 bits (302), Expect = 4.260e-24
Identity = 186/455 (40.88%), Postives = 253/455 (55.60%), Query Frame = 0
Query:  295 PTTPGRHLRLVSSGRHGXXXXXXXXXXXXXXXXXXXXXE-------RGIDADRINLSLVMTGETDIIAKH--------SIANQAVVESVLDIHDQHAAVFLEAMGGNGGAXXXXXXXXXXXXXXXXXXXSKYWSATNGGPGXXXXXXXXXXXXXXXXXGANIVIASHVYDMDLLILLKSPPHAVAGLPGAGXXXXXXXXXXXXXXXXXXYSWTEYDYDGN----SYRRSRPGGWDGVSGRXXXXXXXXANGMRGLDGKVVFQVNGLG-TFSWRYDLRVCPEVTVGDELGAGVLQPGGSVWMRYSVANCGGVPTPLHQDVLMSAERVRWI--RPCDEGKDESSGGVRALPRNIPPQTAVQLPEP--------LRLLLTDIVAPIVGDPLDIEVDVRHCALVSRTNQTMPLVSDQGSHITIAFPLHVSHLFGNVCTVRGGEAFVAWRVFNVSEKSVG 719
            P   G H +++SSG  G  XXXXXXXXXXXXXXXXXXX         G DA  ++++L ++G+  ++           ++A+++V ++  ++     ++FLE  GG+G  XXXXXXXXXXXXXXXX   +++ S TNG   XXXXXXXXXXXXXXXXX + + +   + D DLL+LLK PP    G  GAGXXXXXXXXXXXXXXXX  YSWT    D N    ++  S PGG  G    XXXXXXXX        G  +  V   G + +WRY+L V  +V + D  G GV++PG  V++R+SV N GG+PTP  QD+ +      W+  RP DE           +P  + P  +  L           L + + D+  P  G  L     + H A VSR NQT   V+DQ +   + +P+ V+ + GN    R  EA +  +V N S  ++G
Sbjct:   38 PAVGGLHTKIISSGADGRHXXXXXXXXXXXXXXXXXXXXXXXXXXXHGDDALALDVALSVSGDRVVVGSAMFAGAIGGTVAHESV-DNSFELGHPDTSLFLEGRGGDGXXXXXXXXXXXXXXXXXXRNATRHSSGTNGXXXXXXXXXXXXXXXXXXXXXSQMRVRVDLSDADLLMLLKRPPLVRRGYAGAGXXXXXXXXXXXXXXXXASYSWTTTSTDANGVTQTHHHSNPGGCSGXXXXXXXXXXXXXXXXXXGTGSFIITVANSGLSAAWRYELVVVNDVELMDRDGYGVMEPGAHVFVRHSVLNEGGLPTPRDQDIAVFVNSNEWVLCRPEDEV---------VIPNELMPGCSHHLSAASATYPLGDLHIQIVDVFEPRHGPALRARAVLDHQARVSRINQTFDHVADQNTSFRVEYPVEVTQIRGNFSISRSEEAILMVQVVNKSSLAIG 482          
BLAST of Gcaud2149.t1 vs. uniprot
Match: A0A2P6NL36_9EUKA (PH domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NL36_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 1.420e-6
Identity = 117/411 (28.47%), Postives = 179/411 (43.55%), Query Frame = 0
Query:  440 NIVIASHVYDMDLLILL-KSPPHAVAGLPGAGXXXXXXXXXXXXXXXXXXYSWTEYDYDGNSYR---RSRPGGWDGVSGRXXXXXXXXANGMRGLDGKVVFQVNGLGTFSWRYDLRVCPEVTVGDEL-----GAGVLQPGGSVWMRYSVANCGGVPTPLHQDVLMSAERVRWIRPCDEGKDESSGGVRALPRNIPPQTAVQLPEPLRLLLTDIVAPIVGDPLDIEVDVRHCALVSRTNQTMPLVSDQGSHITIAFPLHVSHLFGNVCTVRGGEAFVAWRVFNVSEKSVGPLASVPRKARVRFSAIDREQRDVEDDQGQTISAYMLEMGHIEHAKEIAPHDFQVGACNAGDGAVEY-VPSFPGQITNVENIEAGEEVGFIRTVRLGGNSGRDAPSPHSQICVTTTLELGHPR 840
            NI +     DMDL++LL +       G  G  XXXXXXXXXXXXXXXX  YSWTE    G++      S PGG       XXXXXXXX     G D   V++++ L             ++ V D       G GV +P  +V +     N   +PTP HQ V       +W+  C    +        L R++P +   ++  P+RL +TD++ P +G+P      + H A V+R  +    VS   +   + +   +S + G        EA V + + NVS   +G   +   KARV  +++   Q D +   G                 +I P D  +  C+    + E  V +    +T  +       +GF+ T         D P P+++I +T++L LGHP+
Sbjct:  199 NITVHLSEKDMDLIMLLDQQVSETRGGFHGTXXXXXXXXXXXXXXXXXSSYSWTETHGSGDNRHTTHHSNPGGHRXXXXXXXXXXXXXXXXXXGSD--AVYRIDLLSDEGHHISYDAPSKLRVSDPYFYNVEGWGVFEPASNVELFVDHENEADMPTPKHQAVEAYVADNQWVN-CKSHSE--------LSRSMPYRLHERISVPIRLSITDVLEPTLGNPFAARAKLEHLAYVTRVGKFYEQVSQVTTGFDLRYAAEMSGIKGPSSISVVEEAPVVFCIDNVSLLHLG---AQTEKARVLRTSL---QIDYDRCVGPV---------------KITPSDLVLRDCDGKTLSTERPVNANILDLTQSDQKFLTASMGFLNT---------DIP-PYTRIALTSSLFLGHPQ 567          
The following BLAST results are available for this feature:
BLAST of Gcaud2149.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A0L0D4E5_THETB4.260e-2440.88Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A2P6NL36_9EUKA1.420e-628.47PH domain-containing protein n=1 Tax=Planoprotoste... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_774_length_18304_cov_4.574150contigNODE_774_length_18304_cov_4.574150:3125..10628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2149.t1Gcaud2149.t1Gracilaria caudata M_176_S67 malemRNANODE_774_length_18304_cov_4.574150 3125..10628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2149.t1 ID=Gcaud2149.t1|Name=Gcaud2149.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=843bp
LKALVRSEEEQLTVLKNMFKVLEQTAVPALPSVQRELAELKSQSLLGQEE
ERNESEKSSKDNAAMHAELLAKIDMGLNIMKSGVSQQIEESASSLKQNAW
ISARREAIATAKILVTHLQSYRENLLSMSDVSAVSSEDEKSISIFALAFL
RLKVSKQTQKLAENDGSATPQLVGVEAVPGLDWKAGKPEPAPNIQTDAEE
DIKVRSNAPAKIFQKTSRAVNGGAGGLPVTKPRSGKDFYPHMRTLGLWNV
GAATGCILRSEIRLRTSPALAAMSRNLTTPLFSFGALIFPSSATPTTPGR
HLRLVSSGRHGAHGADGMAGYPGASGEDGTPGERGIDADRINLSLVMTGE
TDIIAKHSIANQAVVESVLDIHDQHAAVFLEAMGGNGGAGGNGGHGGNGM
AGKDGRDASKYWSATNGGPGQDGGNGGEGGRGGDSGNGANIVIASHVYDM
DLLILLKSPPHAVAGLPGAGGMGGRGGSGGRGGRGGSGYSWTEYDYDGNS
YRRSRPGGWDGVSGRDGIPGRDAANGMRGLDGKVVFQVNGLGTFSWRYDL
RVCPEVTVGDELGAGVLQPGGSVWMRYSVANCGGVPTPLHQDVLMSAERV
RWIRPCDEGKDESSGGVRALPRNIPPQTAVQLPEPLRLLLTDIVAPIVGD
PLDIEVDVRHCALVSRTNQTMPLVSDQGSHITIAFPLHVSHLFGNVCTVR
GGEAFVAWRVFNVSEKSVGPLASVPRKARVRFSAIDREQRDVEDDQGQTI
SAYMLEMGHIEHAKEIAPHDFQVGACNAGDGAVEYVPSFPGQITNVENIE
AGEEVGFIRTVRLGGNSGRDAPSPHSQICVTTTLELGHPRAL*
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