Gcaud9945.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9945.t1
Unique NameGcaud9945.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length258
Homology
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A2V3IUQ6_9FLOR (Chymotrypsin-like elastase family member 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUQ6_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 4.180e-80
Identity = 141/268 (52.61%), Postives = 173/268 (64.55%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDYSPVNIGTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVLVGRFDSDFRVLERSVGRHGDGQTRNSRLEDHSRIG------------TEKEGLEASPEEE 256
            LTAAHCVD YGT  DADK KT +Y+GS  TIPDESER+Y+L DI++ KKF+S+ NDFRNDVA+L L + I E  Y PV IGTAP  GS V A GYGSV+E GT AV AM+T +VT++F+ C +RE  SIR+ LDN  Q+C   + F   G  D   GDSGGPLF  N+    IQFASTSFST GCAE GGVAWY RL  Y+ AI K++ G  +S FR +          +   S     +RIG            +E++ +EASPEEE
Sbjct:   68 LTAAHCVDAYGTGDDADKKKTHVYIGSKLTIPDESERRYFLEDIFLQKKFQSDLNDFRNDVAMLKLKDDIVEHKYHPVRIGTAPVQGSTVIAAGYGSVDEDGTRAVEAMETNVVTQNFSTCSQREINSIRQTLDNRVQVCIIRL-FMTVGDGD---GDSGGPLFRVNEEGKVIQFASTSFSTKGCAEPGGVAWYARLWSYRRAISKLIRGDTNSSFRRMAAVNADTKTSEGEASWRHKPTRIGVRLDLKRMRDRASEEDDVEASPEEE 331          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A2V3IVT0_9FLOR (Trypsin n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT0_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 1.760e-43
Identity = 76/207 (36.71%), Postives = 127/207 (61.35%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDYSPVNIGTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKV 207
            L+AAHCV  Y +    +K  +++YVG  ++ P  +E  +Y   +++  ++ ++  D R D+A++ L+  I ++ Y P+ I   PK    V A GYG  ++ G+ +  AMQT +++KSF+ CYE +    + +L  +  +CA S G+P +G TD+C GDSGGPLF++ +   + Q+  TSFS  GCAE GG+ WY RLS ++  +R++
Sbjct:   69 LSAAHCV--YSSSETVEKAYSYVYVGQKRSEPRNAEA-FYFEKVWIPDEYYAD-EDSRFDIAVVKLDTEIPDELYYPIRIAKEPKPDKKVIAAGYGLTSDGGSDSKYAMQTTVISKSFDECYENDYEEAQDILSEKYHVCAVSKGWPDKGRTDSCQGDSGGPLFFKKRGKLY-QYGITSFSYWGCAEAGGIPWYIRLSTFKRQMRRI 270          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A2V3IXG0_9FLOR (Peptidase S1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG0_9FLOR)

HSP 1 Score: 141 bits (356), Expect = 3.700e-37
Identity = 81/205 (39.51%), Postives = 111/205 (54.15%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQT---IPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDYSPVNIG-TAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWI-QFASTSFSTGGCAEVGGVAWYTRLSRY 200
            LTAAHC         A    T+ +VG T     I +     Y+ + I+VHK F+      R+D+A++ L+  I     + V +    P  GS V A GYG++ +    A   M+  ++ K F+VC +RE    RK L   S +CA SVG+P RG TDTC GDSGGPLF  +++   I QF  TSF T  CAE G V+WYTR+S +
Sbjct:   65 LTAAHCFSGPSGSTSAIPAATYAFVGETDATLRIDNTDIEPYWAKQIHVHKNFKPGTAGHRSDIAMVYLDRVIPPQQLATVVLDKNLPPFGSAVMAAGYGTLGKNAAKATILMKAPVLLKPFSVCVDREHPFFRKYLKLWSHLCAVSVGWPTRGSTDTCAGDSGGPLFKFDRDTRRIRQFGITSFGTSDCAEAGSVSWYTRVSTF 269          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A2V3IG52_9FLOR (Serine protease 30 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG52_9FLOR)

HSP 1 Score: 107 bits (268), Expect = 3.100e-24
Identity = 67/211 (31.75%), Postives = 111/211 (52.61%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQT---IPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDYSPVNIGTAPKDG-SVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGG-CAEVGGVAWYTRLSRYQSAIRK 206
            L AAHC   +     A   ++++ VG   T     +  + KY++R++++H+K++   + F++DVAL+ L + I +  Y P+ +G AP +G S +TA GYG          RA +  ++ + ++ C E     I      +S+IC TS+ FP +G T TC+GDSGGP+  + +N  +IQ   TSF  G  C   G +    R+  Y   I +
Sbjct:   75 LCAAHC---FVLPSKALVRRSYVLVGEPSTKIKYFESPQNKYFVRNVWIHRKYKDN-SLFKHDVALIQLQKKIDKKLYKPMALGAAPDEGRSKLTAAGYGVKGSNKGEPKRARRASVLYQEWDTCNEEAGYPIAN--SEKSEICYTSLKFPNKGKTGTCFGDSGGPIT-KKENGEYIQVGITSFFVGDLCESPGAIFVAQRVENYLKQINR 278          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A3B4ALJ1_9GOBI (Peptidase S1 domain-containing protein n=5 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4ALJ1_9GOBI)

HSP 1 Score: 85.1 bits (209), Expect = 8.310e-16
Identity = 67/222 (30.18%), Postives = 105/222 (47.30%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDY-SPVNI--GTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVLVGRFDSDFRVL 219
            +TAAHC   +  R ++           T+T PDE   K  +  I  H KF  +   F ND+AL+ L   +   D+ +PV +  GT P  GS     G+GS+ E  T A +     ++ +S   C     +++ K L   + +CA   G+   G+ D+C GDSGGPL Y+++ +   Q    +    GC E G    YTR+S +   I+  +  RF +   +L
Sbjct:   79 VTAAHC---FAGRSESYWTAVVGEFDITKTDPDEQVLK--VNRIIPHPKFNPK--TFNNDIALVELTTPVVLSDHVTPVCLPGGTEPPTGSPCLVAGWGSLYEGNTCAEKVFSVPLLPQS--TC----KSTLGKDLVTNTMLCA---GYLSGGI-DSCQGDSGGPLIYQDRMSGRFQLYGITSWGDGCGEKGKPGVYTRVSAFSDWIQSEIQSRFKTTEHIL 283          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A3P8Y1A1_ESOLU (Serine protease 56 n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8Y1A1_ESOLU)

HSP 1 Score: 85.1 bits (209), Expect = 4.130e-15
Identity = 67/217 (30.88%), Postives = 102/217 (47.00%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNE-SIAEDDYSPVNI--GTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVLVGRFDS 214
            +TAAHC    G+R ++           T+T PDE E K  +  I  H KF  +   F ND+AL+ L   ++  D  +PV +  G  P  GS     G+GS+ E G  A   M+ ++     + C     +++ K L   + +CA   G+   G+ D+C GDSGGPL Y+++ +   Q    +    GC E G    YTR+S +   I   +   F S
Sbjct:  226 VTAAHCFA--GSRSESHWTAVVGEFDITRTDPDEQEVK--VNRIIPHPKFNPK--TFNNDIALVELTSPAVLSDRVTPVCLPSGLEPATGSPCLVAGWGSLYEDGPSADVVMEAKVPLLPQSTC----KSALGKELVTNTMLCA---GYLSGGI-DSCQGDSGGPLIYQDRMSGRFQLHGITSWGDGCGEKGKPGVYTRVSAFSDWILTEIQKSFGS 428          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A819TEG5_9BILA (Hypothetical protein n=6 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819TEG5_9BILA)

HSP 1 Score: 85.1 bits (209), Expect = 4.460e-15
Identity = 60/221 (27.15%), Postives = 102/221 (46.15%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDY-------------SPVNIGTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVL 208
            LTAAHCVD +       +N T        T      R+  +  I++H ++  +   ++ND+A+L LNE +  D +             SP +I   P +GS++  +G+G+ N+        +Q      S    +  ++T  R +     Q C    G    G+   CYGDSGGP+F +  ++ W Q   +S+   GCA VG  + +TRL+ +   I +++
Sbjct:  684 LTAAHCVDNFNPSSILSQNITIAAGIHNLTSSTPIIRR--VDQIFIHPEYAGQPQLYKNDIAILHLNEPLNIDTHPLVKRTCRPPRINSPEDIMKYPSNGSMLVTIGWGAANKPANIKPEVLQ----QLSIYAIHHNDSTCARSIGHVNVQFCG---GLYEGGI---CYGDSGGPIF-QWLSDRWEQVGISSYVMNGCASVGYQSVFTRLAAFYDWIEEIV 891          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A4W5N5L4_9TELE (Serine protease 56 n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5N5L4_9TELE)

HSP 1 Score: 84.3 bits (207), Expect = 6.190e-15
Identity = 68/217 (31.34%), Postives = 100/217 (46.08%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIA-EDDYSPVNI--GTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVLVGRFDS 214
            +TAAHC    G+R D+           T+T PDE   K  +  I  H KF  +   F ND+AL+ L   +   D  +PV +  G  P  GS     G+GS+ E G  A   M+ ++     + C     +S+ K L   + +CA   G+   G+ D+C GDSGGPL Y+++ +   Q    +    GC E G    YTR+S +   I   +   F S
Sbjct:  139 VTAAHCFA--GSRSDSYWTAVVGEFDITKTDPDEQVLK--VNRIISHPKFNPK--TFNNDIALVELTSPVVLSDRVTPVCLPSGLEPPTGSPCLVAGWGSLYEDGPSADVVMEAKVPLLPQSTC----KSSLGKELVTNTMLCA---GYLSGGI-DSCQGDSGGPLIYQDRMSGRFQLHGITSWGDGCGEKGKPGVYTRVSAFSDWILAEIQKSFGS 341          
BLAST of Gcaud9945.t1 vs. uniprot
Match: A0A3Q3GE39_9LABR (Serine protease 56 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3GE39_9LABR)

HSP 1 Score: 84.3 bits (207), Expect = 6.460e-15
Identity = 67/217 (30.88%), Postives = 103/217 (47.47%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDY-SPVNI--GTAPKDGSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVLVGRFDS 214
            +TAAHC    G+R ++           T+T PDE   K  +  I  H KF S+   F ND+AL+ L   +   D+ +PV +  G  P  GS     G+GS+ E G  A   M+ ++     + C     +++ K L   + +CA   G+   G+ D+C GDSGGPL Y+++ +   Q    +    GC E G    YTR+S +   I+  +   F S
Sbjct:   86 VTAAHCFA--GSRSESYWTAVVGEFDITKTDPDEQILK--VNRIIPHPKFNSK--TFNNDIALVELTSPVVLSDHVTPVCLPSGMDPPTGSPCLVAGWGSLYEDGPSADVVMEAKVPLLPQSTC----KSALGKELVTNTMLCA---GYLSGGI-DSCQGDSGGPLIYQDRISGRFQLYGITSWGDGCGEKGKPGVYTRVSAFSDWIQAEIQKSFGS 288          
BLAST of Gcaud9945.t1 vs. uniprot
Match: UPI001C4501DA (trypsin-1-like n=1 Tax=Homarus americanus TaxID=6706 RepID=UPI001C4501DA)

HSP 1 Score: 83.6 bits (205), Expect = 7.480e-15
Identity = 62/211 (29.38%), Postives = 99/211 (46.92%), Query Frame = 0
Query:    1 LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKFRSEFNDFRNDVALLTLNESIAEDDYSPVNIGTAPKD---GSVVTAVGYGSVNEAGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRGVTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRYQSAIRKVL 208
            LTAAHCV         ++N+ F+Y+G+ Q   + +ER     D+ +H  + S  ND  ND AL+ + +++A D    V I +   +       T +G+G+ +  G+ +    +  +   S + C  R       + DN   ICA   G      TD+C GDSGGPL Y + +  ++Q    S+     AE  GV  YTR++     I  V+
Sbjct:  198 LTAAHCVS------GKNRNQVFVYLGAHQYNDNTNERG--AEDLIIHPLYNSNRND--NDAALIKIADAMASDTVGYVCIASNRANLYSQGTATVIGWGTTSSGGSISSTLREADVPLMSNSECSSRYLNYGSYITDN--MICAGQPG------TDSCQGDSGGPLLYPDGSVDYVQIGVVSWGINCAAEYPGV--YTRVTSVSDWIENVV 388          
The following BLAST results are available for this feature:
BLAST of Gcaud9945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUQ6_9FLOR4.180e-8052.61Chymotrypsin-like elastase family member 1 n=1 Tax... [more]
A0A2V3IVT0_9FLOR1.760e-4336.71Trypsin n=1 Tax=Gracilariopsis chorda TaxID=448386... [more]
A0A2V3IXG0_9FLOR3.700e-3739.51Peptidase S1 domain-containing protein n=1 Tax=Gra... [more]
A0A2V3IG52_9FLOR3.100e-2431.75Serine protease 30 n=1 Tax=Gracilariopsis chorda T... [more]
A0A3B4ALJ1_9GOBI8.310e-1630.18Peptidase S1 domain-containing protein n=5 Tax=Per... [more]
A0A3P8Y1A1_ESOLU4.130e-1530.88Serine protease 56 n=1 Tax=Esox lucius TaxID=8010 ... [more]
A0A819TEG5_9BILA4.460e-1527.15Hypothetical protein n=6 Tax=Rotaria sp. Silwood2 ... [more]
A0A4W5N5L4_9TELE6.190e-1531.34Serine protease 56 n=1 Tax=Hucho hucho TaxID=62062... [more]
A0A3Q3GE39_9LABR6.460e-1530.88Serine protease 56 n=1 Tax=Labrus bergylta TaxID=5... [more]
UPI001C4501DA7.480e-1529.38trypsin-1-like n=1 Tax=Homarus americanus TaxID=67... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 56..70
score: 32.46
coord: 152..164
score: 64.36
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 1..204
e-value: 3.4E-8
score: 39.4
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 1..204
e-value: 7.9E-24
score: 84.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 1..209
score: 16.558043
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 1..214
e-value: 3.0E-35
score: 123.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..257
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..249
NoneNo IPR availablePANTHERPTHR24260FAMILY NOT NAMEDcoord: 1..207
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 1..6
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 153..164
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 1..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_752_length_18626_cov_5.148961contigNODE_752_length_18626_cov_5.148961:14328..15216 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9945.t1Gcaud9945.t1Gracilaria caudata M_176_S67 malemRNANODE_752_length_18626_cov_5.148961 14328..15216 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9945.t1 ID=Gcaud9945.t1|Name=Gcaud9945.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=258bp
LTAAHCVDVYGTRGDADKNKTFLYVGSTQTIPDESERKYYLRDIYVHKKF
RSEFNDFRNDVALLTLNESIAEDDYSPVNIGTAPKDGSVVTAVGYGSVNE
AGTPAVRAMQTRIVTKSFNVCYERETTSIRKVLDNESQICATSVGFPRRG
VTDTCYGDSGGPLFYENKNNTWIQFASTSFSTGGCAEVGGVAWYTRLSRY
QSAIRKVLVGRFDSDFRVLERSVGRHGDGQTRNSRLEDHSRIGTEKEGLE
ASPEEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR043504Peptidase_S1_PA_chymotrypsin
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA