Gcaud9503.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9503.t2
Unique NameGcaud9503.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length134
Homology
[Close]
BLAST of Gcaud9503.t2 vs. uniprot
Match: R7QFN6_CHOCR (C2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFN6_CHOCR)

HSP 1 Score: 186 bits (473), Expect = 1.040e-58
Identity = 89/133 (66.92%), Postives = 110/133 (82.71%), Query Frame = 0 
Query:    1 MEGKLSIWIKSGSFNHYRDLYIQVLVDDNDIWRTDDKDGFSPNWDSTVVKHVKGDYEKIILRLMDEDTFTRDDVIATAEFPIADLLDDGINDDEIPMCDADGNQIGTLAVNINFEEGDVNLFQLFGSMLHKGE 133
            MEGKLSIWIK GSF+H  DLY++VL+DD ++W+TD+KDG SP+WDSTVVKH+KG+YEKIIL+LMDEDTF+RDDVI T EFPI D +  GIN     + DA+ N +GT+ VNINFEEGDV++F L GSMLHK +
Sbjct:    1 MEGKLSIWIKGGSFSHSSDLYMKVLIDDKEVWKTDEKDGSSPDWDSTVVKHIKGEYEKIILKLMDEDTFSRDDVIGTVEFPICDTVS-GING-SFDVKDAEDNSVGTVDVNINFEEGDVSMFDLLGSMLHKDD 131
The following BLAST results are available for this feature:
BLAST of Gcaud9503.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QFN6_CHOCR1.040e-5866.92C2 domain-containing protein n=1 Tax=Chondrus cris... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 5..116
e-value: 1.4E-10
score: 43.6
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 3..114
IPR000008C2 domainPFAMPF00168C2coord: 17..93
e-value: 1.5E-9
score: 38.1
IPR000008C2 domainPROSITEPS50004C2coord: 1..95
score: 9.768337
NoneNo IPR availableCDDcd00030C2coord: 9..94
e-value: 1.72326E-8
score: 47.0615

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_69_length_56878_cov_4.412084contigNODE_69_length_56878_cov_4.412084:15675..16437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9503.t2Gcaud9503.t2Gracilaria caudata M_176_S67 malemRNANODE_69_length_56878_cov_4.412084 15675..16437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9503.t2 ID=Gcaud9503.t2|Name=Gcaud9503.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=134bp
MEGKLSIWIKSGSFNHYRDLYIQVLVDDNDIWRTDDKDGFSPNWDSTVVK
HVKGDYEKIILRLMDEDTFTRDDVIATAEFPIADLLDDGINDDEIPMCDA
DGNQIGTLAVNINFEEGDVNLFQLFGSMLHKGE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom