Gcaud2887.t1 (mRNA) Gracilaria caudata M_176_S67 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Gcaud2887.t1
Unique Name	Gcaud2887.t1
Type	mRNA
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	1827

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_637_length_20512_cov_3.841634	contig	NODE_637_length_20512_cov_3.841634:6543..12023 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Properties


Property Name	Value
Seed ortholog	130081.XP_005705294.1
PFAMs	DCB,DUF1981,RabGAP-TBC,Sec7,Sec7_N
Max annot lvl	2759\|Eukaryota
KEGG ko	ko:K13462,ko:K18441,ko:K18442
KEGG Pathway	ko04072,ko04144,map04072,map04144
Evalue	0.0
EggNOG OGs	COG5307@1\|root,KOG0929@2759\|Eukaryota
Description	regulation of ARF protein signal transduction
COG category	K
BRITE	ko00000,ko00001,ko04131

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud2887	Gcaud2887	Gracilaria caudata M_176_S67 male	gene	NODE_637_length_20512_cov_3.841634 6543..12023 -

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2887.t1.stop1	Gcaud2887.t1.stop1	Gracilaria caudata M_176_S67 male	stop_codon	NODE_637_length_20512_cov_3.841634 6543..6545 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2887.t1.CDS1	Gcaud2887.t1.CDS1	Gracilaria caudata M_176_S67 male	CDS	NODE_637_length_20512_cov_3.841634 6543..12023 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2887.t1.exon1	Gcaud2887.t1.exon1	Gracilaria caudata M_176_S67 male	exon	NODE_637_length_20512_cov_3.841634 6543..12023 -

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2887.t1.start1	Gcaud2887.t1.start1	Gracilaria caudata M_176_S67 male	start_codon	NODE_637_length_20512_cov_3.841634 12021..12023 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Gcaud2887.t1	Gcaud2887.t1	Gracilaria caudata M_176_S67 male	polypeptide	NODE_637_length_20512_cov_3.841634 6543..12023 -

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at NODE_637_length_20512_cov_3.841634:6543..12023-
coding sequence from alignment at NODE_637_length_20512_cov_3.841634:6543..12023-

mRNA sequence

>Gcaud2887.t1 ID=Gcaud2887.t1|Name=Gcaud2887.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=1827bp
MQLSPTADHLLVVRPGDLAAFAQLFARFHVRVEKAAAGRKHRPLRDAFDA
AAAEIASHPDKIHPSAVSELVVDALRHGCESRKTAIVDACLDCIHRLFEY
GHLGATTDATQIRLDARPGALDEVVAMVCACLEVKDEDVYLRMVQTLLTA
ATRTSTGLHQGTLLAAVRTIYNIFLNARTPGTRTTARVSLTQVLNLVFGR
MEAETAADESVVSSITADRNALDVPNATEEGDTHFATILQKDAYLLFRAL
CKLSAKEVVDNNSSDAVSLRSKLLSLELIRNLITNSGPAFRGGERFIYAL
RHYLTPSLLVNCMWNSAEVMDISFDIFEILLRKDTLRPLLKTEISALFDT
VVFRFLESPTAGAMRKRRAITLLNRLSSDRQTMADLFLNYDCDMESPKIF
ERLCNVVSTAAQNKAEVDTPNGTLQTTTAQPDIKLMALTSVTQIVRSLRE
WSKPIEQSKAYNKDLSSDSVPSESQSELTDDEALQKGDTDSIATVSNDKL
DEGQSSDENKKSSPLRLNRSTSRAAVVGVISEGNDRDTTRFEETLKAKRD
TAHGITLFNTKPKRGIEYLVKKGRLKQEPKAVAEFLHKSENLDATMVGEY
LGDSGSFSLNVMHAYTDMHDFTDMTFDNALRMHLSGFRLPGEAQKIDRIM
EKYASRYCECNPTIFANADAAYVLAYSTIMLHTDAHNDTIKNKMTKEDFI
KNNRGINDGGDLDPKFLGNLYDRITTTEIRLTSNKKDSTGGDSKALNAAA
SAMDASQRAKQFEEESERLMAQTKVLFAKNRRPAQDYTYYTATNVHLARL
MFETAWYPVLAAISLNLEEAPPADTSTITLCLDCFRNGIAIASTFSIATS
KSAFVSSLAKFTHLHSISEMRPKNVECIRMILAIAALEGNNLGEQWVLIV
RAISQLEQVRAVASGNPSKFILQKEPLKGVTNTALNDRNGTLHAHKSTGT
ITVESRGDTPDMLLSPTTNARRNSGTRPSLSDGNIQRSGNTMQRIDPKAA
SMASTIAENEIERIFSNSSKLSPNGVADFCHALCTVALEELSESPGPRIF
CVQKIVEMAYYNMESRTRLEWGRIWEQMGRFFASAMCHSNRNVALYAIDA
LRQLASKFLEKDELSNFSFQRSFLKPFETCFSKSKVVQIREFVLSCVSQL
VHARAHNIKSGWRSVFGVLALAADDKVDKIMKTGWEIVDSVARKYVGSID
EVYVDAITGITAYTRTAISTDVPIAAINLLSGTCASSLAEGKALSYLRVQ
RAENDNDKNDTEDLEIWFTADTEAHIGSWFPILTGLAAALQDERPQVRTA
ASAGLFRVLENHGGHFSPSLWVLIFRGVLSPVFDDVGYLSSSSDRIEGAA
IEQWATTTGSVSMKSLVDIFVQHISVTRELLQDLLDIIRRWVLQETEIIA
REGMFVLDRLLRAVGSSLTSEDWGLVVKHVHLLFVDTIPHEILGPGASSS
SPVSEKSFDTKESKELNGVLNHASNHGEPEHVPNGKLEEANESEKNDTTG
NTDDRAEPADGEDSEPRRVRFKVVRAKCVVQLQLIQLAQELVVWFYKGLS
TSDVLSLGESLSLSYLFAHNFNANIDLRFTLWRTGFMNQVPNLLMQETKG
LMAYLRLLFWLYLDPNRADDKERTEKKVMTLCEGVLRNYINACEESQLNA
DSEERREVTAFSAVICFIVNGMMQMSYEQFEKHLPSLYSILLDLLDGADD
NEVRNCVTRLFRARIAPTSWRPGSSSNGPGHSHSLLVAHPQLPGEMRERI
VRTKVGVDIGPNVSDDICKALRKVCGVDTVLPISSDKSDSFKVVCAAPDE
MLIAGVMGVSAVKAAFVEPPDSTLLD*

spliced messenger RNA

>Gcaud2887.t1 ID=Gcaud2887.t1|Name=Gcaud2887.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5481bp|location=Sequence derived from alignment at NODE_637_length_20512_cov_3.841634:6543..12023- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGCTCTCCCCCACCGCTGACCATCTGTTGGTTGTTCGACCCGGCGA
CCTTGCTGCTTTTGCGCAGCTGTTTGCTCGCTTTCATGTGCGTGTGGAGA
AGGCTGCCGCCGGCAGGAAGCACCGTCCACTGAGAGATGCTTTCGATGCT
GCCGCCGCAGAGATCGCTTCTCACCCCGATAAGATCCACCCCAGCGCTGT
TTCCGAGCTTGTTGTCGATGCTCTGCGACACGGATGCGAGTCCAGGAAGA
CTGCCATTGTCGACGCCTGTCTGGACTGTATCCACAGACTTTTCGAATAT
GGTCATCTCGGTGCCACTACCGACGCCACTCAAATTCGTCTGGACGCGCG
CCCCGGTGCTTTGGATGAGGTTGTTGCCATGGTCTGCGCCTGCCTGGAGG
TTAAAGACGAGGATGTCTATTTGCGTATGGTACAAACCTTGCTCACTGCT
GCCACTCGCACCAGCACCGGTCTGCATCAGGGCACGTTGCTAGCCGCAGT
GCGTACCATTTATAACATCTTTCTCAATGCGCGCACGCCCGGAACCAGAA
CTACTGCGCGAGTGTCGCTTACACAAGTGCTCAATCTTGTGTTCGGACGC
ATGGAAGCCGAGACTGCTGCGGACGAGTCGGTGGTGTCATCGATTACCGC
CGATCGAAATGCCTTGGATGTACCGAACGCCACGGAGGAAGGAGATACCC
ATTTCGCCACCATCTTGCAAAAGGACGCGTACCTGTTGTTCAGAGCTTTG
TGCAAGCTCTCAGCGAAGGAAGTGGTGGACAATAATTCTTCTGACGCAGT
TTCGTTGCGCTCCAAGTTGCTTTCGCTTGAACTTATCCGCAACCTTATAA
CCAACAGTGGTCCCGCTTTTCGTGGTGGAGAGCGCTTTATATATGCATTA
CGTCATTATCTAACTCCTTCACTTTTGGTCAACTGCATGTGGAACTCTGC
GGAGGTTATGGACATCTCGTTTGACATATTCGAGATTCTACTTCGAAAAG
ACACGTTACGACCGCTGCTAAAAACAGAAATCAGTGCTCTGTTTGACACT
GTTGTTTTCCGTTTCCTTGAGTCACCTACTGCTGGTGCCATGCGTAAACG
GCGAGCAATCACACTTCTTAATCGTTTGTCTTCTGACAGACAAACCATGG
CTGACTTGTTTCTCAACTACGATTGCGATATGGAGTCTCCAAAGATCTTT
GAGCGATTGTGCAATGTCGTGTCCACTGCTGCACAGAACAAAGCAGAGGT
TGATACACCGAACGGAACGCTGCAGACTACAACCGCCCAACCGGATATTA
AACTGATGGCGCTCACTTCTGTCACTCAGATTGTCAGGTCTCTACGAGAG
TGGTCAAAACCAATTGAACAGTCTAAAGCGTATAACAAGGACCTCAGTTC
GGATTCGGTACCGTCAGAGTCCCAAAGTGAGCTCACCGACGACGAAGCTC
TTCAAAAGGGCGACACTGACAGCATTGCCACCGTGAGCAATGACAAGCTT
GATGAAGGTCAGTCATCTGATGAGAATAAGAAGTCATCTCCTTTGCGTTT
GAACAGATCCACATCGCGCGCTGCAGTTGTGGGTGTCATTTCCGAAGGGA
ATGACAGGGATACAACGCGTTTTGAAGAGACGCTTAAAGCGAAACGAGAT
ACTGCACACGGTATTACACTGTTCAATACCAAGCCAAAGCGCGGCATTGA
GTATCTTGTCAAGAAAGGTCGTTTGAAGCAGGAACCCAAAGCAGTGGCCG
AATTCCTTCACAAGTCTGAAAACCTCGATGCCACTATGGTCGGTGAGTAT
CTTGGTGATTCTGGCAGTTTTAGCCTCAACGTCATGCATGCGTATACCGA
TATGCATGATTTCACTGACATGACATTTGACAATGCACTTCGAATGCATC
TAAGCGGCTTTCGGCTTCCGGGTGAGGCGCAGAAGATTGATCGTATCATG
GAAAAGTATGCGTCGCGGTATTGCGAGTGTAACCCTACAATTTTTGCCAA
TGCTGATGCAGCATATGTTCTCGCTTATTCTACCATCATGTTGCACACGG
ATGCTCACAACGACACTATCAAAAATAAGATGACCAAAGAAGACTTTATC
AAGAACAATCGGGGTATTAACGATGGGGGCGACCTTGATCCCAAGTTTTT
GGGAAACCTGTATGATCGTATTACGACTACTGAAATTCGGCTTACTTCAA
ATAAGAAGGACTCGACTGGTGGAGACTCGAAGGCTCTAAACGCTGCAGCC
AGTGCAATGGATGCGTCGCAGCGAGCAAAGCAGTTTGAAGAAGAGAGCGA
AAGGCTCATGGCCCAGACTAAAGTACTGTTTGCAAAGAATCGTCGTCCGG
CGCAAGATTATACTTACTACACAGCGACCAATGTCCATCTTGCGAGGTTG
ATGTTCGAGACTGCATGGTATCCGGTGTTAGCTGCGATATCCTTGAACTT
GGAAGAAGCGCCGCCTGCTGACACGAGTACAATAACCCTGTGTCTGGACT
GCTTTAGAAATGGGATTGCGATTGCGTCGACGTTTAGCATCGCTACGTCG
AAGAGCGCGTTCGTGTCGTCCCTAGCGAAGTTCACGCACTTGCACAGCAT
TTCGGAAATGCGACCGAAGAATGTTGAATGTATCCGAATGATTTTGGCAA
TTGCGGCACTTGAAGGGAATAACCTGGGAGAACAATGGGTTCTCATCGTG
CGAGCAATATCGCAGTTAGAGCAAGTGCGAGCCGTAGCTAGCGGAAACCC
GAGCAAATTCATCCTTCAGAAAGAGCCATTGAAAGGGGTGACGAATACTG
CTCTAAATGACCGCAACGGGACCCTACATGCACACAAGTCAACGGGTACA
ATAACGGTTGAAAGCAGAGGGGATACTCCCGACATGCTATTGAGTCCCAC
AACCAATGCGAGACGAAATTCTGGTACACGGCCAAGCTTGTCAGATGGAA
ACATACAAAGGTCTGGGAACACGATGCAACGCATTGACCCCAAGGCGGCT
TCGATGGCATCTACGATCGCCGAGAATGAAATCGAAAGGATCTTTTCCAA
TTCGTCAAAGCTGTCACCCAATGGAGTTGCCGACTTTTGCCATGCGCTAT
GTACTGTTGCCCTAGAAGAGCTGAGCGAAAGTCCAGGCCCTAGAATCTTC
TGCGTGCAGAAGATAGTAGAGATGGCCTATTACAATATGGAATCTCGCAC
TCGTCTAGAGTGGGGAAGAATATGGGAACAGATGGGTAGATTTTTCGCTT
CCGCAATGTGTCATTCGAACCGTAATGTCGCATTATACGCCATCGATGCG
TTGCGGCAGCTCGCGTCAAAGTTCCTCGAAAAGGATGAGCTTTCTAACTT
TTCATTTCAACGGTCTTTTCTCAAACCGTTCGAGACCTGCTTTAGCAAGT
CAAAGGTGGTTCAGATTCGCGAGTTTGTTCTTAGCTGTGTTTCCCAATTA
GTTCATGCTCGAGCTCACAATATCAAATCCGGGTGGAGATCTGTGTTTGG
AGTGTTGGCCTTGGCCGCCGATGACAAGGTTGATAAGATCATGAAGACTG
GCTGGGAAATCGTTGATTCTGTTGCTCGGAAATACGTTGGCAGTATTGAC
GAGGTCTATGTGGATGCTATCACTGGAATAACTGCCTATACCCGAACTGC
GATTTCCACTGATGTACCAATCGCGGCTATAAATCTGTTGAGTGGAACAT
GTGCCTCTTCTTTAGCAGAAGGAAAGGCATTGTCTTATTTGCGAGTTCAG
CGGGCTGAAAACGACAACGACAAGAACGATACTGAAGATCTGGAGATATG
GTTCACGGCGGACACTGAGGCACACATTGGGAGCTGGTTTCCGATATTAA
CTGGTCTCGCTGCGGCACTGCAGGATGAACGTCCGCAAGTGCGCACAGCT
GCTAGCGCGGGTTTGTTCAGAGTTCTTGAAAACCATGGTGGGCATTTCTC
TCCAAGCCTCTGGGTTCTCATCTTTCGAGGAGTATTATCACCTGTCTTTG
ACGACGTGGGATATTTGTCCTCGAGCAGTGACAGAATAGAGGGGGCAGCC
ATTGAACAATGGGCTACCACAACTGGGTCGGTGTCAATGAAGTCTCTCGT
TGACATTTTTGTACAACACATATCTGTAACAAGAGAACTACTGCAGGATC
TGCTGGATATCATTCGCAGATGGGTTTTGCAAGAAACAGAAATTATTGCC
CGAGAAGGGATGTTTGTATTGGACCGCCTGCTGAGGGCTGTCGGATCATC
TCTCACATCTGAAGATTGGGGGCTGGTTGTGAAACATGTTCATTTGCTCT
TTGTGGATACCATACCACATGAGATTCTTGGTCCGGGTGCTTCCTCTTCC
TCCCCCGTATCTGAAAAGTCTTTCGATACAAAGGAATCGAAGGAATTAAA
TGGAGTTTTGAACCATGCGTCCAATCACGGAGAACCAGAGCATGTACCGA
ATGGAAAGCTCGAGGAAGCAAACGAATCAGAAAAGAACGATACAACGGGG
AATACCGACGATAGAGCAGAGCCAGCTGATGGAGAGGACAGCGAACCCAG
GCGTGTTCGTTTCAAGGTCGTGCGGGCGAAATGCGTCGTTCAGTTACAGC
TGATTCAGTTGGCTCAAGAGTTGGTAGTATGGTTCTATAAGGGTTTGTCA
ACTTCCGATGTCCTGAGTCTCGGGGAATCACTTTCTCTGAGTTACCTTTT
TGCTCACAATTTCAACGCCAACATAGATCTACGTTTCACTTTGTGGAGGA
CAGGGTTCATGAACCAGGTTCCGAATCTCCTAATGCAGGAAACGAAAGGG
TTGATGGCTTATCTGAGGTTACTGTTCTGGCTTTACTTGGATCCCAATAG
AGCGGACGACAAGGAGAGGACAGAGAAGAAAGTGATGACCCTATGCGAAG
GTGTGCTACGGAACTACATCAACGCATGCGAAGAATCCCAGCTGAATGCG
GATTCTGAAGAGCGACGTGAAGTAACAGCATTTTCGGCAGTGATTTGCTT
TATAGTGAATGGGATGATGCAAATGTCCTATGAACAATTTGAGAAACATC
TGCCGAGCCTGTACTCCATCCTTCTCGATTTGCTGGATGGAGCAGACGAC
AACGAAGTGCGCAACTGCGTGACTAGGCTGTTCCGCGCCCGAATTGCTCC
GACATCATGGAGACCGGGTAGTAGTTCGAATGGCCCTGGACACAGTCACT
CTCTTCTGGTCGCCCATCCTCAACTACCCGGTGAAATGAGAGAAAGAATT
GTTCGCACGAAAGTTGGAGTAGACATTGGACCTAATGTCAGTGATGACAT
TTGCAAGGCATTGCGTAAGGTGTGCGGAGTGGATACTGTGTTACCGATTT
CATCGGATAAGAGCGACTCGTTTAAAGTGGTCTGTGCCGCACCTGATGAA
ATGCTGATAGCAGGCGTGATGGGAGTTTCTGCTGTTAAGGCAGCTTTTGT
TGAACCGCCAGATAGCACTTTACTTGACTGA

protein sequence of Gcaud2887.t1

>Gcaud2887.t1 ID=Gcaud2887.t1|Name=Gcaud2887.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1827bp
MQLSPTADHLLVVRPGDLAAFAQLFARFHVRVEKAAAGRKHRPLRDAFDA
AAAEIASHPDKIHPSAVSELVVDALRHGCESRKTAIVDACLDCIHRLFEY
GHLGATTDATQIRLDARPGALDEVVAMVCACLEVKDEDVYLRMVQTLLTA
ATRTSTGLHQGTLLAAVRTIYNIFLNARTPGTRTTARVSLTQVLNLVFGR
MEAETAADESVVSSITADRNALDVPNATEEGDTHFATILQKDAYLLFRAL
CKLSAKEVVDNNSSDAVSLRSKLLSLELIRNLITNSGPAFRGGERFIYAL
RHYLTPSLLVNCMWNSAEVMDISFDIFEILLRKDTLRPLLKTEISALFDT
VVFRFLESPTAGAMRKRRAITLLNRLSSDRQTMADLFLNYDCDMESPKIF
ERLCNVVSTAAQNKAEVDTPNGTLQTTTAQPDIKLMALTSVTQIVRSLRE
WSKPIEQSKAYNKDLSSDSVPSESQSELTDDEALQKGDTDSIATVSNDKL
DEGQSSDENKKSSPLRLNRSTSRAAVVGVISEGNDRDTTRFEETLKAKRD
TAHGITLFNTKPKRGIEYLVKKGRLKQEPKAVAEFLHKSENLDATMVGEY
LGDSGSFSLNVMHAYTDMHDFTDMTFDNALRMHLSGFRLPGEAQKIDRIM
EKYASRYCECNPTIFANADAAYVLAYSTIMLHTDAHNDTIKNKMTKEDFI
KNNRGINDGGDLDPKFLGNLYDRITTTEIRLTSNKKDSTGGDSKALNAAA
SAMDASQRAKQFEEESERLMAQTKVLFAKNRRPAQDYTYYTATNVHLARL
MFETAWYPVLAAISLNLEEAPPADTSTITLCLDCFRNGIAIASTFSIATS
KSAFVSSLAKFTHLHSISEMRPKNVECIRMILAIAALEGNNLGEQWVLIV
RAISQLEQVRAVASGNPSKFILQKEPLKGVTNTALNDRNGTLHAHKSTGT
ITVESRGDTPDMLLSPTTNARRNSGTRPSLSDGNIQRSGNTMQRIDPKAA
SMASTIAENEIERIFSNSSKLSPNGVADFCHALCTVALEELSESPGPRIF
CVQKIVEMAYYNMESRTRLEWGRIWEQMGRFFASAMCHSNRNVALYAIDA
LRQLASKFLEKDELSNFSFQRSFLKPFETCFSKSKVVQIREFVLSCVSQL
VHARAHNIKSGWRSVFGVLALAADDKVDKIMKTGWEIVDSVARKYVGSID
EVYVDAITGITAYTRTAISTDVPIAAINLLSGTCASSLAEGKALSYLRVQ
RAENDNDKNDTEDLEIWFTADTEAHIGSWFPILTGLAAALQDERPQVRTA
ASAGLFRVLENHGGHFSPSLWVLIFRGVLSPVFDDVGYLSSSSDRIEGAA
IEQWATTTGSVSMKSLVDIFVQHISVTRELLQDLLDIIRRWVLQETEIIA
REGMFVLDRLLRAVGSSLTSEDWGLVVKHVHLLFVDTIPHEILGPGASSS
SPVSEKSFDTKESKELNGVLNHASNHGEPEHVPNGKLEEANESEKNDTTG
NTDDRAEPADGEDSEPRRVRFKVVRAKCVVQLQLIQLAQELVVWFYKGLS
TSDVLSLGESLSLSYLFAHNFNANIDLRFTLWRTGFMNQVPNLLMQETKG
LMAYLRLLFWLYLDPNRADDKERTEKKVMTLCEGVLRNYINACEESQLNA
DSEERREVTAFSAVICFIVNGMMQMSYEQFEKHLPSLYSILLDLLDGADD
NEVRNCVTRLFRARIAPTSWRPGSSSNGPGHSHSLLVAHPQLPGEMRERI
VRTKVGVDIGPNVSDDICKALRKVCGVDTVLPISSDKSDSFKVVCAAPDE
MLIAGVMGVSAVKAAFVEPPDSTLLD*

mRNA from alignment at NODE_637_length_20512_cov_3.841634:6543..12023-

Legend: polypeptideCDSexonstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>Gcaud2887.t1 ID=Gcaud2887.t1|Name=Gcaud2887.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=5481bp|location=Sequence derived from alignment at NODE_637_length_20512_cov_3.841634:6543..12023- (Gracilaria caudata M_176_S67 male)
ATGCAGCTCTCCCCCACCGCTGACCATCTGTTGGTTGTTCGACCCGGCGA
CCTTGCTGCTTTTGCGCAGCTGTTTGCTCGCTTTCATGTGCGTGTGGAGA
AGGCTGCCGCCGGCAGGAAGCACCGTCCACTGAGAGATGCTTTCGATGCT
GCCGCCGCAGAGATCGCTTCTCACCCCGATAAGATCCACCCCAGCGCTGT
TTCCGAGCTTGTTGTCGATGCTCTGCGACACGGATGCGAGTCCAGGAAGA
CTGCCATTGTCGACGCCTGTCTGGACTGTATCCACAGACTTTTCGAATAT
GGTCATCTCGGTGCCACTACCGACGCCACTCAAATTCGTCTGGACGCGCG
CCCCGGTGCTTTGGATGAGGTTGTTGCCATGGTCTGCGCCTGCCTGGAGG
TTAAAGACGAGGATGTCTATTTGCGTATGGTACAAACCTTGCTCACTGCT
GCCACTCGCACCAGCACCGGTCTGCATCAGGGCACGTTGCTAGCCGCAGT
GCGTACCATTTATAACATCTTTCTCAATGCGCGCACGCCCGGAACCAGAA
CTACTGCGCGAGTGTCGCTTACACAAGTGCTCAATCTTGTGTTCGGACGC
ATGGAAGCCGAGACTGCTGCGGACGAGTCGGTGGTGTCATCGATTACCGC
CGATCGAAATGCCTTGGATGTACCGAACGCCACGGAGGAAGGAGATACCC
ATTTCGCCACCATCTTGCAAAAGGACGCGTACCTGTTGTTCAGAGCTTTG
TGCAAGCTCTCAGCGAAGGAAGTGGTGGACAATAATTCTTCTGACGCAGT
TTCGTTGCGCTCCAAGTTGCTTTCGCTTGAACTTATCCGCAACCTTATAA
CCAACAGTGGTCCCGCTTTTCGTGGTGGAGAGCGCTTTATATATGCATTA
CGTCATTATCTAACTCCTTCACTTTTGGTCAACTGCATGTGGAACTCTGC
GGAGGTTATGGACATCTCGTTTGACATATTCGAGATTCTACTTCGAAAAG
ACACGTTACGACCGCTGCTAAAAACAGAAATCAGTGCTCTGTTTGACACT
GTTGTTTTCCGTTTCCTTGAGTCACCTACTGCTGGTGCCATGCGTAAACG
GCGAGCAATCACACTTCTTAATCGTTTGTCTTCTGACAGACAAACCATGG
CTGACTTGTTTCTCAACTACGATTGCGATATGGAGTCTCCAAAGATCTTT
GAGCGATTGTGCAATGTCGTGTCCACTGCTGCACAGAACAAAGCAGAGGT
TGATACACCGAACGGAACGCTGCAGACTACAACCGCCCAACCGGATATTA
AACTGATGGCGCTCACTTCTGTCACTCAGATTGTCAGGTCTCTACGAGAG
TGGTCAAAACCAATTGAACAGTCTAAAGCGTATAACAAGGACCTCAGTTC
GGATTCGGTACCGTCAGAGTCCCAAAGTGAGCTCACCGACGACGAAGCTC
TTCAAAAGGGCGACACTGACAGCATTGCCACCGTGAGCAATGACAAGCTT
GATGAAGGTCAGTCATCTGATGAGAATAAGAAGTCATCTCCTTTGCGTTT
GAACAGATCCACATCGCGCGCTGCAGTTGTGGGTGTCATTTCCGAAGGGA
ATGACAGGGATACAACGCGTTTTGAAGAGACGCTTAAAGCGAAACGAGAT
ACTGCACACGGTATTACACTGTTCAATACCAAGCCAAAGCGCGGCATTGA
GTATCTTGTCAAGAAAGGTCGTTTGAAGCAGGAACCCAAAGCAGTGGCCG
AATTCCTTCACAAGTCTGAAAACCTCGATGCCACTATGGTCGGTGAGTAT
CTTGGTGATTCTGGCAGTTTTAGCCTCAACGTCATGCATGCGTATACCGA
TATGCATGATTTCACTGACATGACATTTGACAATGCACTTCGAATGCATC
TAAGCGGCTTTCGGCTTCCGGGTGAGGCGCAGAAGATTGATCGTATCATG
GAAAAGTATGCGTCGCGGTATTGCGAGTGTAACCCTACAATTTTTGCCAA
TGCTGATGCAGCATATGTTCTCGCTTATTCTACCATCATGTTGCACACGG
ATGCTCACAACGACACTATCAAAAATAAGATGACCAAAGAAGACTTTATC
AAGAACAATCGGGGTATTAACGATGGGGGCGACCTTGATCCCAAGTTTTT
GGGAAACCTGTATGATCGTATTACGACTACTGAAATTCGGCTTACTTCAA
ATAAGAAGGACTCGACTGGTGGAGACTCGAAGGCTCTAAACGCTGCAGCC
AGTGCAATGGATGCGTCGCAGCGAGCAAAGCAGTTTGAAGAAGAGAGCGA
AAGGCTCATGGCCCAGACTAAAGTACTGTTTGCAAAGAATCGTCGTCCGG
CGCAAGATTATACTTACTACACAGCGACCAATGTCCATCTTGCGAGGTTG
ATGTTCGAGACTGCATGGTATCCGGTGTTAGCTGCGATATCCTTGAACTT
GGAAGAAGCGCCGCCTGCTGACACGAGTACAATAACCCTGTGTCTGGACT
GCTTTAGAAATGGGATTGCGATTGCGTCGACGTTTAGCATCGCTACGTCG
AAGAGCGCGTTCGTGTCGTCCCTAGCGAAGTTCACGCACTTGCACAGCAT
TTCGGAAATGCGACCGAAGAATGTTGAATGTATCCGAATGATTTTGGCAA
TTGCGGCACTTGAAGGGAATAACCTGGGAGAACAATGGGTTCTCATCGTG
CGAGCAATATCGCAGTTAGAGCAAGTGCGAGCCGTAGCTAGCGGAAACCC
GAGCAAATTCATCCTTCAGAAAGAGCCATTGAAAGGGGTGACGAATACTG
CTCTAAATGACCGCAACGGGACCCTACATGCACACAAGTCAACGGGTACA
ATAACGGTTGAAAGCAGAGGGGATACTCCCGACATGCTATTGAGTCCCAC
AACCAATGCGAGACGAAATTCTGGTACACGGCCAAGCTTGTCAGATGGAA
ACATACAAAGGTCTGGGAACACGATGCAACGCATTGACCCCAAGGCGGCT
TCGATGGCATCTACGATCGCCGAGAATGAAATCGAAAGGATCTTTTCCAA
TTCGTCAAAGCTGTCACCCAATGGAGTTGCCGACTTTTGCCATGCGCTAT
GTACTGTTGCCCTAGAAGAGCTGAGCGAAAGTCCAGGCCCTAGAATCTTC
TGCGTGCAGAAGATAGTAGAGATGGCCTATTACAATATGGAATCTCGCAC
TCGTCTAGAGTGGGGAAGAATATGGGAACAGATGGGTAGATTTTTCGCTT
CCGCAATGTGTCATTCGAACCGTAATGTCGCATTATACGCCATCGATGCG
TTGCGGCAGCTCGCGTCAAAGTTCCTCGAAAAGGATGAGCTTTCTAACTT
TTCATTTCAACGGTCTTTTCTCAAACCGTTCGAGACCTGCTTTAGCAAGT
CAAAGGTGGTTCAGATTCGCGAGTTTGTTCTTAGCTGTGTTTCCCAATTA
GTTCATGCTCGAGCTCACAATATCAAATCCGGGTGGAGATCTGTGTTTGG
AGTGTTGGCCTTGGCCGCCGATGACAAGGTTGATAAGATCATGAAGACTG
GCTGGGAAATCGTTGATTCTGTTGCTCGGAAATACGTTGGCAGTATTGAC
GAGGTCTATGTGGATGCTATCACTGGAATAACTGCCTATACCCGAACTGC
GATTTCCACTGATGTACCAATCGCGGCTATAAATCTGTTGAGTGGAACAT
GTGCCTCTTCTTTAGCAGAAGGAAAGGCATTGTCTTATTTGCGAGTTCAG
CGGGCTGAAAACGACAACGACAAGAACGATACTGAAGATCTGGAGATATG
GTTCACGGCGGACACTGAGGCACACATTGGGAGCTGGTTTCCGATATTAA
CTGGTCTCGCTGCGGCACTGCAGGATGAACGTCCGCAAGTGCGCACAGCT
GCTAGCGCGGGTTTGTTCAGAGTTCTTGAAAACCATGGTGGGCATTTCTC
TCCAAGCCTCTGGGTTCTCATCTTTCGAGGAGTATTATCACCTGTCTTTG
ACGACGTGGGATATTTGTCCTCGAGCAGTGACAGAATAGAGGGGGCAGCC
ATTGAACAATGGGCTACCACAACTGGGTCGGTGTCAATGAAGTCTCTCGT
TGACATTTTTGTACAACACATATCTGTAACAAGAGAACTACTGCAGGATC
TGCTGGATATCATTCGCAGATGGGTTTTGCAAGAAACAGAAATTATTGCC
CGAGAAGGGATGTTTGTATTGGACCGCCTGCTGAGGGCTGTCGGATCATC
TCTCACATCTGAAGATTGGGGGCTGGTTGTGAAACATGTTCATTTGCTCT
TTGTGGATACCATACCACATGAGATTCTTGGTCCGGGTGCTTCCTCTTCC
TCCCCCGTATCTGAAAAGTCTTTCGATACAAAGGAATCGAAGGAATTAAA
TGGAGTTTTGAACCATGCGTCCAATCACGGAGAACCAGAGCATGTACCGA
ATGGAAAGCTCGAGGAAGCAAACGAATCAGAAAAGAACGATACAACGGGG
AATACCGACGATAGAGCAGAGCCAGCTGATGGAGAGGACAGCGAACCCAG
GCGTGTTCGTTTCAAGGTCGTGCGGGCGAAATGCGTCGTTCAGTTACAGC
TGATTCAGTTGGCTCAAGAGTTGGTAGTATGGTTCTATAAGGGTTTGTCA
ACTTCCGATGTCCTGAGTCTCGGGGAATCACTTTCTCTGAGTTACCTTTT
TGCTCACAATTTCAACGCCAACATAGATCTACGTTTCACTTTGTGGAGGA
CAGGGTTCATGAACCAGGTTCCGAATCTCCTAATGCAGGAAACGAAAGGG
TTGATGGCTTATCTGAGGTTACTGTTCTGGCTTTACTTGGATCCCAATAG
AGCGGACGACAAGGAGAGGACAGAGAAGAAAGTGATGACCCTATGCGAAG
GTGTGCTACGGAACTACATCAACGCATGCGAAGAATCCCAGCTGAATGCG
GATTCTGAAGAGCGACGTGAAGTAACAGCATTTTCGGCAGTGATTTGCTT
TATAGTGAATGGGATGATGCAAATGTCCTATGAACAATTTGAGAAACATC
TGCCGAGCCTGTACTCCATCCTTCTCGATTTGCTGGATGGAGCAGACGAC
AACGAAGTGCGCAACTGCGTGACTAGGCTGTTCCGCGCCCGAATTGCTCC
GACATCATGGAGACCGGGTAGTAGTTCGAATGGCCCTGGACACAGTCACT
CTCTTCTGGTCGCCCATCCTCAACTACCCGGTGAAATGAGAGAAAGAATT
GTTCGCACGAAAGTTGGAGTAGACATTGGACCTAATGTCAGTGATGACAT
TTGCAAGGCATTGCGTAAGGTGTGCGGAGTGGATACTGTGTTACCGATTT
CATCGGATAAGAGCGACTCGTTTAAAGTGGTCTGTGCCGCACCTGATGAA
ATGCTGATAGCAGGCGTGATGGGAGTTTCTGCTGTTAAGGCAGCTTTTGT
TGAACCGCCAGATAGCACTTTACTTGACTGA

Coding sequence (CDS) from alignment at NODE_637_length_20512_cov_3.841634:6543..12023-

>Gcaud2887.t1 ID=Gcaud2887.t1|Name=Gcaud2887.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=5481bp|location=Sequence derived from alignment at NODE_637_length_20512_cov_3.841634:6543..12023- (Gracilaria caudata M_176_S67 male)
ATGCAGCTCTCCCCCACCGCTGACCATCTGTTGGTTGTTCGACCCGGCGA
CCTTGCTGCTTTTGCGCAGCTGTTTGCTCGCTTTCATGTGCGTGTGGAGA
AGGCTGCCGCCGGCAGGAAGCACCGTCCACTGAGAGATGCTTTCGATGCT
GCCGCCGCAGAGATCGCTTCTCACCCCGATAAGATCCACCCCAGCGCTGT
TTCCGAGCTTGTTGTCGATGCTCTGCGACACGGATGCGAGTCCAGGAAGA
CTGCCATTGTCGACGCCTGTCTGGACTGTATCCACAGACTTTTCGAATAT
GGTCATCTCGGTGCCACTACCGACGCCACTCAAATTCGTCTGGACGCGCG
CCCCGGTGCTTTGGATGAGGTTGTTGCCATGGTCTGCGCCTGCCTGGAGG
TTAAAGACGAGGATGTCTATTTGCGTATGGTACAAACCTTGCTCACTGCT
GCCACTCGCACCAGCACCGGTCTGCATCAGGGCACGTTGCTAGCCGCAGT
GCGTACCATTTATAACATCTTTCTCAATGCGCGCACGCCCGGAACCAGAA
CTACTGCGCGAGTGTCGCTTACACAAGTGCTCAATCTTGTGTTCGGACGC
ATGGAAGCCGAGACTGCTGCGGACGAGTCGGTGGTGTCATCGATTACCGC
CGATCGAAATGCCTTGGATGTACCGAACGCCACGGAGGAAGGAGATACCC
ATTTCGCCACCATCTTGCAAAAGGACGCGTACCTGTTGTTCAGAGCTTTG
TGCAAGCTCTCAGCGAAGGAAGTGGTGGACAATAATTCTTCTGACGCAGT
TTCGTTGCGCTCCAAGTTGCTTTCGCTTGAACTTATCCGCAACCTTATAA
CCAACAGTGGTCCCGCTTTTCGTGGTGGAGAGCGCTTTATATATGCATTA
CGTCATTATCTAACTCCTTCACTTTTGGTCAACTGCATGTGGAACTCTGC
GGAGGTTATGGACATCTCGTTTGACATATTCGAGATTCTACTTCGAAAAG
ACACGTTACGACCGCTGCTAAAAACAGAAATCAGTGCTCTGTTTGACACT
GTTGTTTTCCGTTTCCTTGAGTCACCTACTGCTGGTGCCATGCGTAAACG
GCGAGCAATCACACTTCTTAATCGTTTGTCTTCTGACAGACAAACCATGG
CTGACTTGTTTCTCAACTACGATTGCGATATGGAGTCTCCAAAGATCTTT
GAGCGATTGTGCAATGTCGTGTCCACTGCTGCACAGAACAAAGCAGAGGT
TGATACACCGAACGGAACGCTGCAGACTACAACCGCCCAACCGGATATTA
AACTGATGGCGCTCACTTCTGTCACTCAGATTGTCAGGTCTCTACGAGAG
TGGTCAAAACCAATTGAACAGTCTAAAGCGTATAACAAGGACCTCAGTTC
GGATTCGGTACCGTCAGAGTCCCAAAGTGAGCTCACCGACGACGAAGCTC
TTCAAAAGGGCGACACTGACAGCATTGCCACCGTGAGCAATGACAAGCTT
GATGAAGGTCAGTCATCTGATGAGAATAAGAAGTCATCTCCTTTGCGTTT
GAACAGATCCACATCGCGCGCTGCAGTTGTGGGTGTCATTTCCGAAGGGA
ATGACAGGGATACAACGCGTTTTGAAGAGACGCTTAAAGCGAAACGAGAT
ACTGCACACGGTATTACACTGTTCAATACCAAGCCAAAGCGCGGCATTGA
GTATCTTGTCAAGAAAGGTCGTTTGAAGCAGGAACCCAAAGCAGTGGCCG
AATTCCTTCACAAGTCTGAAAACCTCGATGCCACTATGGTCGGTGAGTAT
CTTGGTGATTCTGGCAGTTTTAGCCTCAACGTCATGCATGCGTATACCGA
TATGCATGATTTCACTGACATGACATTTGACAATGCACTTCGAATGCATC
TAAGCGGCTTTCGGCTTCCGGGTGAGGCGCAGAAGATTGATCGTATCATG
GAAAAGTATGCGTCGCGGTATTGCGAGTGTAACCCTACAATTTTTGCCAA
TGCTGATGCAGCATATGTTCTCGCTTATTCTACCATCATGTTGCACACGG
ATGCTCACAACGACACTATCAAAAATAAGATGACCAAAGAAGACTTTATC
AAGAACAATCGGGGTATTAACGATGGGGGCGACCTTGATCCCAAGTTTTT
GGGAAACCTGTATGATCGTATTACGACTACTGAAATTCGGCTTACTTCAA
ATAAGAAGGACTCGACTGGTGGAGACTCGAAGGCTCTAAACGCTGCAGCC
AGTGCAATGGATGCGTCGCAGCGAGCAAAGCAGTTTGAAGAAGAGAGCGA
AAGGCTCATGGCCCAGACTAAAGTACTGTTTGCAAAGAATCGTCGTCCGG
CGCAAGATTATACTTACTACACAGCGACCAATGTCCATCTTGCGAGGTTG
ATGTTCGAGACTGCATGGTATCCGGTGTTAGCTGCGATATCCTTGAACTT
GGAAGAAGCGCCGCCTGCTGACACGAGTACAATAACCCTGTGTCTGGACT
GCTTTAGAAATGGGATTGCGATTGCGTCGACGTTTAGCATCGCTACGTCG
AAGAGCGCGTTCGTGTCGTCCCTAGCGAAGTTCACGCACTTGCACAGCAT
TTCGGAAATGCGACCGAAGAATGTTGAATGTATCCGAATGATTTTGGCAA
TTGCGGCACTTGAAGGGAATAACCTGGGAGAACAATGGGTTCTCATCGTG
CGAGCAATATCGCAGTTAGAGCAAGTGCGAGCCGTAGCTAGCGGAAACCC
GAGCAAATTCATCCTTCAGAAAGAGCCATTGAAAGGGGTGACGAATACTG
CTCTAAATGACCGCAACGGGACCCTACATGCACACAAGTCAACGGGTACA
ATAACGGTTGAAAGCAGAGGGGATACTCCCGACATGCTATTGAGTCCCAC
AACCAATGCGAGACGAAATTCTGGTACACGGCCAAGCTTGTCAGATGGAA
ACATACAAAGGTCTGGGAACACGATGCAACGCATTGACCCCAAGGCGGCT
TCGATGGCATCTACGATCGCCGAGAATGAAATCGAAAGGATCTTTTCCAA
TTCGTCAAAGCTGTCACCCAATGGAGTTGCCGACTTTTGCCATGCGCTAT
GTACTGTTGCCCTAGAAGAGCTGAGCGAAAGTCCAGGCCCTAGAATCTTC
TGCGTGCAGAAGATAGTAGAGATGGCCTATTACAATATGGAATCTCGCAC
TCGTCTAGAGTGGGGAAGAATATGGGAACAGATGGGTAGATTTTTCGCTT
CCGCAATGTGTCATTCGAACCGTAATGTCGCATTATACGCCATCGATGCG
TTGCGGCAGCTCGCGTCAAAGTTCCTCGAAAAGGATGAGCTTTCTAACTT
TTCATTTCAACGGTCTTTTCTCAAACCGTTCGAGACCTGCTTTAGCAAGT
CAAAGGTGGTTCAGATTCGCGAGTTTGTTCTTAGCTGTGTTTCCCAATTA
GTTCATGCTCGAGCTCACAATATCAAATCCGGGTGGAGATCTGTGTTTGG
AGTGTTGGCCTTGGCCGCCGATGACAAGGTTGATAAGATCATGAAGACTG
GCTGGGAAATCGTTGATTCTGTTGCTCGGAAATACGTTGGCAGTATTGAC
GAGGTCTATGTGGATGCTATCACTGGAATAACTGCCTATACCCGAACTGC
GATTTCCACTGATGTACCAATCGCGGCTATAAATCTGTTGAGTGGAACAT
GTGCCTCTTCTTTAGCAGAAGGAAAGGCATTGTCTTATTTGCGAGTTCAG
CGGGCTGAAAACGACAACGACAAGAACGATACTGAAGATCTGGAGATATG
GTTCACGGCGGACACTGAGGCACACATTGGGAGCTGGTTTCCGATATTAA
CTGGTCTCGCTGCGGCACTGCAGGATGAACGTCCGCAAGTGCGCACAGCT
GCTAGCGCGGGTTTGTTCAGAGTTCTTGAAAACCATGGTGGGCATTTCTC
TCCAAGCCTCTGGGTTCTCATCTTTCGAGGAGTATTATCACCTGTCTTTG
ACGACGTGGGATATTTGTCCTCGAGCAGTGACAGAATAGAGGGGGCAGCC
ATTGAACAATGGGCTACCACAACTGGGTCGGTGTCAATGAAGTCTCTCGT
TGACATTTTTGTACAACACATATCTGTAACAAGAGAACTACTGCAGGATC
TGCTGGATATCATTCGCAGATGGGTTTTGCAAGAAACAGAAATTATTGCC
CGAGAAGGGATGTTTGTATTGGACCGCCTGCTGAGGGCTGTCGGATCATC
TCTCACATCTGAAGATTGGGGGCTGGTTGTGAAACATGTTCATTTGCTCT
TTGTGGATACCATACCACATGAGATTCTTGGTCCGGGTGCTTCCTCTTCC
TCCCCCGTATCTGAAAAGTCTTTCGATACAAAGGAATCGAAGGAATTAAA
TGGAGTTTTGAACCATGCGTCCAATCACGGAGAACCAGAGCATGTACCGA
ATGGAAAGCTCGAGGAAGCAAACGAATCAGAAAAGAACGATACAACGGGG
AATACCGACGATAGAGCAGAGCCAGCTGATGGAGAGGACAGCGAACCCAG
GCGTGTTCGTTTCAAGGTCGTGCGGGCGAAATGCGTCGTTCAGTTACAGC
TGATTCAGTTGGCTCAAGAGTTGGTAGTATGGTTCTATAAGGGTTTGTCA
ACTTCCGATGTCCTGAGTCTCGGGGAATCACTTTCTCTGAGTTACCTTTT
TGCTCACAATTTCAACGCCAACATAGATCTACGTTTCACTTTGTGGAGGA
CAGGGTTCATGAACCAGGTTCCGAATCTCCTAATGCAGGAAACGAAAGGG
TTGATGGCTTATCTGAGGTTACTGTTCTGGCTTTACTTGGATCCCAATAG
AGCGGACGACAAGGAGAGGACAGAGAAGAAAGTGATGACCCTATGCGAAG
GTGTGCTACGGAACTACATCAACGCATGCGAAGAATCCCAGCTGAATGCG
GATTCTGAAGAGCGACGTGAAGTAACAGCATTTTCGGCAGTGATTTGCTT
TATAGTGAATGGGATGATGCAAATGTCCTATGAACAATTTGAGAAACATC
TGCCGAGCCTGTACTCCATCCTTCTCGATTTGCTGGATGGAGCAGACGAC
AACGAAGTGCGCAACTGCGTGACTAGGCTGTTCCGCGCCCGAATTGCTCC
GACATCATGGAGACCGGGTAGTAGTTCGAATGGCCCTGGACACAGTCACT
CTCTTCTGGTCGCCCATCCTCAACTACCCGGTGAAATGAGAGAAAGAATT
GTTCGCACGAAAGTTGGAGTAGACATTGGACCTAATGTCAGTGATGACAT
TTGCAAGGCATTGCGTAAGGTGTGCGGAGTGGATACTGTGTTACCGATTT
CATCGGATAAGAGCGACTCGTTTAAAGTGGTCTGTGCCGCACCTGATGAA
ATGCTGATAGCAGGCGTGATGGGAGTTTCTGCTGTTAAGGCAGCTTTTGT
TGAACCGCCAGATAGCACTTTACTTGACTGA