Gcaud8733.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8733.t1
Unique NameGcaud8733.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length120
Homology
BLAST of Gcaud8733.t1 vs. uniprot
Match: M2X1E9_GALSU (Zinc finger (C2H2 type) family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X1E9_GALSU)

HSP 1 Score: 103 bits (256), Expect = 3.950e-26
Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = 0
Query:    6 GRVTKRKGSNKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            GR+ KRKG+ K++RRK  L R +DQI +++   G F     +   +D +LPGLGQ+YC+ C RYF+S+  L +H KTK HK RLK+L++ PYS  EAEA  G++ PDNG
Sbjct:    2 GRIAKRKGNFKQNRRKIFLQRHVDQIKEEIERKGVFQA-ITEHTAVDLELPGLGQYYCLPCDRYFVSNDALNSHYKTKAHKRRLKDLQETPYSLREAEAAGGLSAPDNG 109          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A2G4SYI4_RHIZD (C2H2-type domain-containing protein n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4SYI4_RHIZD)

HSP 1 Score: 100 bits (248), Expect = 9.030e-25
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:   15 NKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            N R +R R  +R LDQIHDDL  +     ++M    +D DLPGLGQ YCV+CAR+F+SD+ L  H K+K HK RLK+L ++PY+Q EA+  AG+  PDNG
Sbjct:   16 NYRKQRTRAYTRDLDQIHDDLKPDNY---EKMKHQEVDTDLPGLGQHYCVECARHFISDSHLQEHLKSKLHKRRLKKLEEEPYTQEEADRAAGIGKPDNG 112          
BLAST of Gcaud8733.t1 vs. uniprot
Match: BUD20_SCHPO (Zinc finger protein bud20 n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=BUD20_SCHPO)

HSP 1 Score: 97.4 bits (241), Expect = 9.020e-24
Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 0
Query:   20 RKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPP 111
            R R   R LDQIH+DLT + +F     D LPID DLPGLGQ YC++CARYF S   L  HKK K HK RLK LR++PY+Q EAEA   +  P
Sbjct:   20 RTRVYGRDLDQIHNDLTESEKF-----DKLPIDPDLPGLGQHYCIECARYFDSSQALLVHKKGKVHKRRLKNLREEPYTQEEAEAAVNIGQP 106          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A7S1GEP6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEP6_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.950e-24
Identity = 52/102 (50.98%), Postives = 70/102 (68.63%), Query Frame = 0
Query:    7 RVTKRKGSNKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGM 108
            R+T +K   K++ R R  ++ +DQI D++    +   D +  LPID DLPG GQFYC+ CAR+F++D VLA H +TK+HK RLK +   PYSQ EAEAGAGM
Sbjct:   11 RITAKKKQYKKASRTRVRAKDVDQIQDEIKKMEE--SDVVAPLPIDDDLPGRGQFYCISCARHFINDDVLAYHYRTKQHKRRLKAVMADPYSQAEAEAGAGM 110          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A0C9MA08_9FUNG (Bud site selection-related protein n=1 Tax=Mucor ambiguus TaxID=91626 RepID=A0A0C9MA08_9FUNG)

HSP 1 Score: 97.4 bits (241), Expect = 2.640e-23
Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   15 NKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            N R +R R  +R LDQI DDL        D+     ID DLPGLGQ YCV+CAR+F+S+T L  H K+K HK RLK+L D+PY+Q EA+  AG++ PDNG
Sbjct:   52 NYRKQRTRAYTRDLDQIADDLKPENV---DKKKNQEIDTDLPGLGQHYCVECARHFISETHLTEHLKSKLHKRRLKKLEDEPYTQEEADRAAGISKPDNG 148          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A4P9YW82_9FUNG (Zinc finger protein (Fragment) n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YW82_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 5.790e-23
Identity = 43/81 (53.09%), Postives = 59/81 (72.84%), Query Frame = 0
Query:   28 LDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGM 108
            LDQIHDDL        +++ + P+D DLPGLGQFYC++C+RYF+S + +  H K+K HK RL+EL+D PY+Q EAEA  G+
Sbjct:    1 LDQIHDDLQPTNA---EKLKSQPLDADLPGLGQFYCIECSRYFISTSAMDVHVKSKAHKKRLRELKDAPYTQAEAEAAVGL 78          
BLAST of Gcaud8733.t1 vs. uniprot
Match: S2JHS8_MUCC1 (C2H2-type domain-containing protein n=5 Tax=Mucorineae TaxID=1344963 RepID=S2JHS8_MUCC1)

HSP 1 Score: 94.7 bits (234), Expect = 1.150e-22
Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:   15 NKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            N R +R R  +R LDQI DDL        D+     ID DLPGLGQ YCV+CAR+F+S+  L  H K+K HK RLK+L D+PY+Q EA+  AG+  PDNG
Sbjct:   16 NYRKQRTRAYTRDLDQIADDLKPENI---DKKKHQEIDTDLPGLGQHYCVECARHFISEAHLTEHLKSKLHKRRLKKLEDEPYTQEEADRAAGIGKPDNG 112          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A8H7PSJ4_MORIS (C2H2-type domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PSJ4_MORIS)

HSP 1 Score: 94.7 bits (234), Expect = 1.220e-22
Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   15 NKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            N R  R R  ++ LDQIHDDL G   F+  ++ + PID D  GLGQ YCV CARYF +D  L  H+KTK HK R+K+  ++PY+Q EA+A AGM   DNG
Sbjct:   16 NSRKFRTRAYTKDLDQIHDDLKGEN-FA--KLKSQPIDADKTGLGQHYCVHCARYFPNDDQLQQHEKTKLHKRRVKKTLEEPYTQKEADAAAGMGAADNG 112          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A8H7QZC1_9FUNG (C2H2-type domain-containing protein n=2 Tax=Mucoraceae TaxID=34489 RepID=A0A8H7QZC1_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 2.380e-22
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   15 NKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            N R +R R  +R LDQI DDL        ++     ID DLPGLGQ YC++CAR+F+S+   A H K+K HK RLK+L D+PY+Q EA+  AG++ PDNG
Sbjct:   17 NYRRQRTRAYTRDLDQIQDDLKPENA---EKKKNQAIDTDLPGLGQHYCIECARHFISEAHYAEHLKSKLHKRRLKKLEDEPYTQEEADRAAGISKPDNG 113          
BLAST of Gcaud8733.t1 vs. uniprot
Match: A0A1X2GMS6_9FUNG (C2H2-type domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GMS6_9FUNG)

HSP 1 Score: 92.0 bits (227), Expect = 1.320e-21
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 0
Query:   10 KRKGSNKRS----RRKRTLSRALDQIHDDLTGNGQFSDDRMDALPIDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQLEAEAGAGMAPPDNG 114
            KR  +NKR      R R   R LDQIHDD+         +++A  ID DLPG+ Q YCV+CARYF++   +  H K K HK R+K+L+++PY+Q EA+A AG++  DNG
Sbjct:    7 KRNHNNKREIYRKSRTRNYRRDLDQIHDDVKPENAA---KLNAQDIDTDLPGMAQHYCVECARYFINQEAMDVHTKGKLHKRRIKQLKEEPYTQAEADAAAGISKADNG 112          
The following BLAST results are available for this feature:
BLAST of Gcaud8733.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M2X1E9_GALSU3.950e-2649.54Zinc finger (C2H2 type) family protein n=1 Tax=Gal... [more]
A0A2G4SYI4_RHIZD9.030e-2552.00C2H2-type domain-containing protein n=1 Tax=Rhizop... [more]
BUD20_SCHPO9.020e-2456.52Zinc finger protein bud20 n=1 Tax=Schizosaccharomy... [more]
A0A7S1GEP6_9STRA9.950e-2450.98Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0C9MA08_9FUNG2.640e-2353.00Bud site selection-related protein n=1 Tax=Mucor a... [more]
A0A4P9YW82_9FUNG5.790e-2353.09Zinc finger protein (Fragment) n=1 Tax=Syncephalis... [more]
S2JHS8_MUCC11.150e-2252.00C2H2-type domain-containing protein n=5 Tax=Mucori... [more]
A0A8H7PSJ4_MORIS1.220e-2252.00C2H2-type domain-containing protein n=1 Tax=Mortie... [more]
A0A8H7QZC1_9FUNG2.380e-2250.00C2H2-type domain-containing protein n=2 Tax=Mucora... [more]
A0A1X2GMS6_9FUNG1.320e-2145.87C2H2-type domain-containing protein n=1 Tax=Hessel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003604Matrin/U1-C-like, C2H2-type zinc fingerSMARTSM00451ZnF_U1_5coord: 58..92
e-value: 0.001
score: 28.4
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 48..109
e-value: 5.6E-24
score: 85.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR46095ZINC FINGER PROTEIN 593coord: 7..112
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 60..86
e-value: 1.2E-9
score: 38.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 63..85
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 61..85
score: 8.808193
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 49..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_61_length_58397_cov_4.831458contigNODE_61_length_58397_cov_4.831458:56171..56530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8733.t1Gcaud8733.t1Gracilaria caudata M_176_S67 malemRNANODE_61_length_58397_cov_4.831458 56171..56530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8733.t1 ID=Gcaud8733.t1|Name=Gcaud8733.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=120bp
MGSGTGRVTKRKGSNKRSRRKRTLSRALDQIHDDLTGNGQFSDDRMDALP
IDFDLPGLGQFYCVQCARYFLSDTVLAAHKKTKKHKFRLKELRDKPYSQL
EAEAGAGMAPPDNGSSSRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003604Matrin/U1-like-C_Znf_C2H2
IPR022755Znf_C2H2_jaz
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf