Gcaud7584.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7584.t1
Unique NameGcaud7584.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length213
Homology
[Close]
BLAST of Gcaud7584.t1 vs. uniprot
Match: A0A2V3J2N7_9FLOR (Acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2N7_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 1.100e-62
Identity = 119/236 (50.42%), Postives = 159/236 (67.37%), Query Frame = 0 
Query:    1 MNQTRVVSYEVSQIITHCRDVPEVSELFNIGAKYCIGSILASSTSGLLDEYLNIEKSFARRRGGAADALFGILKENQKDLSSIVELAVFHIRLKEKNVSLIDVLDMLSKLALSGVLSDGKARACE------------------------TIVANLGLPQFHQRKTTIENMLETIVRTPSKRAEEKIEWVARLSESVLDFLVSFISPSENAVVSSAVRSVSTQVYLLRSYRAYDVNN 212
            + Q++ VS  +++I+  CRDVP  SEL    +KY  GS+L SS +G+LDEYL IEK+FARR GG+ADALF +   N+KDLSSIVE+A  HIRL+EKN SL+  L++LS+ ALS VLS+  A+  E                         +VA+L  P FH RKT++E+MLETIVR P  R EE+I+ + RL +S+LD LVSF+ P + +V+S A+RS +TQVYL RSYRAYDV +
Sbjct:  898 IKQSKAVSSSIARILALCRDVPAASELIETASKYSSGSVLGSSIAGVLDEYLKIEKTFARRTGGSADALFALRDGNKKDLSSIVEIAASHIRLREKNSSLVKFLEVLSRPALSAVLSEDNAQTAEFKARLHQLSQLYAPEYSDIALRARIMVADLRRPHFHHRKTSVESMLETIVRAPHDRGEEEIQQMVRLGDSILDVLVSFVLPFDRSVISPAIRSAATQVYLRRSYRAYDVTD 1133
[Close]
BLAST of Gcaud7584.t1 vs. uniprot
Match: R7QB96_CHOCR (Acetyl-CoA carboxylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB96_CHOCR)

HSP 1 Score: 167 bits (423), Expect = 3.740e-44
Identity = 91/234 (38.89%), Postives = 144/234 (61.54%), Query Frame = 0 
Query:    3 QTRVVSYEVSQIITHCRDVPEVSELFNIGAKYCIGSILASSTSGLLDEYLNIEKSFARRRGGAADALFGILKENQKDLSSIVELAVFHIRLKEKNVSLIDVLDMLSKLALSGVLSDGKARACE------------------------TIVANLGLPQFHQRKTTIENMLETIVRTPSKRAEEKIEWVARLSESVLDFLVSFISPSENAVVSSAVRSVSTQVYLLRSYRAYDVNN 212
            + ++VS  VS+I+  C+ +PE  EL N+  +Y  G++LA++ + +LDEYL+IEK FARR GGAADALF +    + DL+S+VE+A  H+RLK+KN +L+  L  L+  + + VL++  A+  E                         ++A+L  P FHQR++++  +L+ +V     + E  ++ +  +SES+LD LVSF+ PS N  VS AVR ++ ++ LLRSYRAY+V N
Sbjct:  906 RAQLVSLSVSRILLSCQGIPEAEELANVARQYTNGTVLATTLAHMLDEYLDIEKLFARRTGGAADALFELRDAKKGDLASVVEVAASHVRLKDKNSALVRFLKTLTAPSAAAVLAEENAQTAEFKARLHQLSQLYAPEYSDIALRARLMLADLRKPHFHQRRSSVLKLLQQVVNCDPDQQESALQNMVSMSESILDVLVSFVLPSNNDDVSPAVRKIAAKIQLLRSYRAYEVTN 1139
The following BLAST results are available for this feature:
BLAST of Gcaud7584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2N7_9FLOR1.100e-6250.42Acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chor... [more]
R7QB96_CHOCR3.740e-4438.89Acetyl-CoA carboxylase n=1 Tax=Chondrus crispus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013537Acetyl-CoA carboxylase, central domainPFAMPF08326ACC_centralcoord: 41..211
e-value: 4.8E-12
score: 44.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1160_length_13169_cov_5.004741contigNODE_1160_length_13169_cov_5.004741:10192..10901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7584.t1Gcaud7584.t1Gracilaria caudata M_176_S67 malemRNANODE_1160_length_13169_cov_5.004741 10192..10901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7584.t1 ID=Gcaud7584.t1|Name=Gcaud7584.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=213bp
MNQTRVVSYEVSQIITHCRDVPEVSELFNIGAKYCIGSILASSTSGLLDE
YLNIEKSFARRRGGAADALFGILKENQKDLSSIVELAVFHIRLKEKNVSL
IDVLDMLSKLALSGVLSDGKARACETIVANLGLPQFHQRKTTIENMLETI
VRTPSKRAEEKIEWVARLSESVLDFLVSFISPSENAVVSSAVRSVSTQVY
LLRSYRAYDVNN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013537AcCoA_COase_cen