Gcaud3167.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3167.t1
Unique NameGcaud3167.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length228
Homology
BLAST of Gcaud3167.t1 vs. uniprot
Match: A0A2V3J7Q5_9FLOR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J7Q5_9FLOR)

HSP 1 Score: 396 bits (1017), Expect = 1.550e-138
Identity = 182/227 (80.18%), Postives = 206/227 (90.75%), Query Frame = 0
Query:    1 MGQAVSKSKSKSNPRPHITATFPGDPDHGQVVVRTTAVPTKVARPRLIHKRIKCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            MGQ+ SK+KSKSNP P ITATFPGDPDHGQVV+++TAVP+KVARPRL+ KR++CYLDV+IDG P G II++LRPD+QPRTCENFRALCTGEH  SYQ CKFHRIVPGF+LQ+GDVELKTK KEGRGG SIYGRSFADENLHKLSH+QYGV+SMAN+GPHTNNSQFMIVVDP GTDWLDGKHTVFG V+K+SFP+L AIE CA+VF R  KQRARI+ TCQIT+CG L
Sbjct:    1 MGQSASKTKSKSNPLPRITATFPGDPDHGQVVMQSTAVPSKVARPRLVTKRLRCYLDVAIDGKPIGSIIIHLRPDIQPRTCENFRALCTGEHGFSYQHCKFHRIVPGFVLQSGDVELKTKPKEGRGGHSIYGRSFADENLHKLSHDQYGVISMANSGPHTNNSQFMIVVDPSGTDWLDGKHTVFGKVSKQSFPVLEAIEHCAEVFERGGKQRARIVSTCQITECGVL 227          
BLAST of Gcaud3167.t1 vs. uniprot
Match: R7QIU7_CHOCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIU7_CHOCR)

HSP 1 Score: 298 bits (763), Expect = 5.420e-100
Identity = 140/198 (70.71%), Postives = 165/198 (83.33%), Query Frame = 0
Query:   30 QVVVRTTAVPTKVARPRLIHKRIKCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            +VVV   A   K  +PRL+ KRI+CY+D++ID  PAGR++ +LR D++PRT ENFR+LC G++ LSY+ CKFH+IVPGF+LQTGDVELK + +EG+GG SIYGR FADE L KLSH+ YGVLSMANAGPHTNNSQFMIVVDPKGT+WLDGKHTVFG VAKESF  L  IEECA+VF RD K+RARIIKTC I DCGQL
Sbjct:   21 EVVVDDVAEKPKAPKPRLLKKRIRCYMDIAIDDQPAGRLVFDLRSDLKPRTAENFRSLCAGDNGLSYKDCKFHKIVPGFVLQTGDVELKGEKREGKGGLSIYGRFFADEKLDKLSHDGYGVLSMANAGPHTNNSQFMIVVDPKGTNWLDGKHTVFGSVAKESFETLQRIEECAEVFERDAKERARIIKTCTIIDCGQL 218          
BLAST of Gcaud3167.t1 vs. uniprot
Match: R7QRX8_CHOCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRX8_CHOCR)

HSP 1 Score: 163 bits (413), Expect = 1.250e-47
Identity = 89/175 (50.86%), Postives = 106/175 (60.57%), Query Frame = 0
Query:   53 KCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            K Y DV+I GT AGRI++ LR DV P+T ENFRALCTGE    ++   FHR++PGF+LQ GD      + +G GG+SIYG  F DEN  KL H   G+LSMANAGP+TN SQF I  D   T WLDGKH VFG V  E   ++ A+E       R  K       T  I DCG L
Sbjct:    6 KVYFDVNIGGTAAGRIVMELRSDVVPKTAENFRALCTGEKGFGFKDSSFHRVIPGFMLQGGDFT----NGDGTGGKSIYGHKFNDENF-KLRHTDKGILSMANAGPNTNGSQFFICTDK--TSWLDGKHVVFGKVI-EGIDVVEAVEGVGSPSGRTSK-------TVSIADCGVL 165          
BLAST of Gcaud3167.t1 vs. uniprot
Match: A0A3Q2FXQ6_CYPVA (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2FXQ6_CYPVA)

HSP 1 Score: 164 bits (414), Expect = 1.900e-47
Identity = 91/202 (45.05%), Postives = 119/202 (58.91%), Query Frame = 0
Query:   30 QVVVRTTAVPTKVARPRLIH----KRIKCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            Q+  R    P  +A  RL+     K+   +LD+  D  P GR+I+ L  DV P+T ENFRALCTGEH   Y+ C+FHRI+P F+ Q GD      + +G GG+SIYG++F DEN   L H   G LSMAN+GPHTN SQF I      T+WLDGKH VFG V K+   ++  +    Q F   D     ++KT  ITDCG++
Sbjct:    3 QIKKRMRYSPLGLAAARLLSSGSTKKPTVFLDIEADAEPLGRVIIELNADVVPKTAENFRALCTGEHGFGYRGCRFHRIIPEFMCQGGDFT----NNDGTGGKSIYGKTFKDENF-TLKHTGPGTLSMANSGPHTNGSQFFICTAK--TEWLDGKHVVFGQV-KDGIDVVMKM----QSFGLHD---GGVLKTIVITDCGEI 189          
BLAST of Gcaud3167.t1 vs. uniprot
Match: A0A087Y7D1_POEFO (Peptidyl-prolyl cis-trans isomerase n=9 Tax=Poeciliinae TaxID=586240 RepID=A0A087Y7D1_POEFO)

HSP 1 Score: 163 bits (412), Expect = 3.810e-47
Identity = 90/202 (44.55%), Postives = 117/202 (57.92%), Query Frame = 0
Query:   30 QVVVRTTAVPTKVARPRLIH----KRIKCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            Q+  R    P  +A  RL+     K    +LD+  DG P G++I+ L  DV P+T ENFR+LCTGEH   Y+ C+FHRI+P F+ Q GD+     +  G GG+SIYG++F DEN  KL H   G LSMAN+GPHTN SQF I      T+WLDGKH VFG V      ++       Q F   D     ++KT  ITDCG++
Sbjct:    3 QIKNRLRYGPLGLAAARLVSSGPVKNPVVFLDIEADGEPLGKVIIELNADVVPKTAENFRSLCTGEHGFGYRGCRFHRIIPDFMCQGGDIT----NNNGTGGKSIYGKTFKDENF-KLKHTGPGTLSMANSGPHTNASQFFICTAK--TEWLDGKHVVFGQVTDGMDAVMKM-----QSFGLYD---GGVLKTIVITDCGEI 189          
BLAST of Gcaud3167.t1 vs. uniprot
Match: A0A673C3C1_9TELE (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A673C3C1_9TELE)

HSP 1 Score: 163 bits (412), Expect = 3.810e-47
Identity = 90/173 (52.02%), Postives = 109/173 (63.01%), Query Frame = 0
Query:   55 YLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            +LD+  DG P GRII+ L  DV P+T ENFRALCTGEH   Y+   FHR++PGF+ Q GD    TK   G GG+SIYG  F DEN  KL H + G+LSMAN+GP+TN SQF I      T+WLDGKH VFG V KE   I+T +E     F   D     +IK   ITDCG++
Sbjct:   32 FLDIEADGEPLGRIIIELNADVVPKTAENFRALCTGEHGFGYKGSVFHRVIPGFMCQGGDF---TKHN-GTGGKSIYGTKFKDENF-KLKHTEPGILSMANSGPNTNGSQFFICTVK--TEWLDGKHVVFGQV-KEGMDIVTKMES----FGLHD---GGVIKKIVITDCGEI 189          
BLAST of Gcaud3167.t1 vs. uniprot
Match: A0A3Q2PZS5_FUNHE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2PZS5_FUNHE)

HSP 1 Score: 163 bits (412), Expect = 3.810e-47
Identity = 85/173 (49.13%), Postives = 108/173 (62.43%), Query Frame = 0
Query:   55 YLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            +LDV  DG P GR+ + L  DV P+T ENFRALCTGEH   Y+ C+FHRI+PGF+ Q GD      +  G GG+SIYG++F DEN  KL H   G LSMAN+GP+TN SQF I      T+WLDGKH VFG V K+   ++  +    Q F   D     ++K   ITDCG++
Sbjct:   32 FLDVEADGEPLGRVTIELNADVVPKTAENFRALCTGEHGFGYKGCRFHRIIPGFMCQGGDFT----NNNGTGGKSIYGKTFKDENF-KLKHTGPGTLSMANSGPNTNGSQFFICTAK--TEWLDGKHVVFGQV-KDGMDVVVKM----QAFGLHD---GGVLKAIVITDCGEI 189          
BLAST of Gcaud3167.t1 vs. uniprot
Match: A0A6P6Q9U7_CARAU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6Q9U7_CARAU)

HSP 1 Score: 162 bits (409), Expect = 4.860e-47
Identity = 92/175 (52.57%), Postives = 110/175 (62.86%), Query Frame = 0
Query:   53 KCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            + Y D+SIDG  AGRI++ LR DV P+T ENFRALCTGE    YQ C FHRI+P F+ Q GD    TK  +G GGRSIYG+ FADEN   L H   G LSMANAGP+TN SQF I      TDWL+GKH VFG V  E   ++ A+E      +   K  A+++    I DCGQL
Sbjct:    5 RVYFDISIDGRNAGRIVMELRADVVPKTAENFRALCTGEKGFGYQGCGFHRIIPKFMCQGGDF---TKH-DGTGGRSIYGKEFADENF-TLKHGGKGTLSMANAGPNTNGSQFFICT--ANTDWLNGKHVVFGKVV-EGIEVVDAMEAKG---SSSGKCSAKVV----IADCGQL 164          
BLAST of Gcaud3167.t1 vs. uniprot
Match: UPI001A981D65 (peptidylprolyl isomerase Fa n=1 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A981D65)

HSP 1 Score: 166 bits (419), Expect = 5.800e-47
Identity = 89/173 (51.45%), Postives = 110/173 (63.58%), Query Frame = 0
Query:   55 YLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            +LD+  DG P GRI++ LR DV P+T ENFRALCTGEH   Y+ C FHRI+P F+ Q GD    TK   G GG+SIYG+SF DEN  KL H   G+LSMAN+GP+TN SQF I      T+WLDG+H  FG V KE   ++T +E     F   D     +IK   ITDCG++
Sbjct:  131 FLDIEADGEPLGRIVIELRADVAPKTAENFRALCTGEHGFGYKGCVFHRIIPEFMCQGGDF---TKHN-GTGGKSIYGKSFGDENF-KLKHTGPGILSMANSGPNTNGSQFFICTTK--TEWLDGRHVAFGQV-KEGMDVVTKMES----FGLHD---GSVIKKIVITDCGEI 288          
BLAST of Gcaud3167.t1 vs. uniprot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase F, mitochondrial n=16 Tax=Eutheria TaxID=9347 RepID=PPIF_BOVIN)

HSP 1 Score: 163 bits (412), Expect = 6.560e-47
Identity = 89/173 (51.45%), Postives = 107/173 (61.85%), Query Frame = 0
Query:   55 YLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCKFHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGVLSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEECAQVFNRDDKQRARIIKTCQITDCGQL 227
            YLDV  DG P GR+++ L+ DV P+T ENFRALCTGE    Y+   FHR++P F+ Q GD      +  G GG+SIYG  F DEN  KL H   GVLSMANAGP+TN SQF I      TDWLDGKH VFGHV KE   ++  IE      ++  K   +I+    ITDCGQL
Sbjct:   50 YLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFT----NHNGTGGKSIYGSRFPDENF-KLKHEGPGVLSMANAGPNTNGSQFFICTIK--TDWLDGKHVVFGHV-KEGMDVVKKIESFG---SKSGKTSKKIV----ITDCGQL 207          
The following BLAST results are available for this feature:
BLAST of Gcaud3167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7Q5_9FLOR1.550e-13880.18Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
R7QIU7_CHOCR5.420e-10070.71Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondr... [more]
R7QRX8_CHOCR1.250e-4750.86Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondr... [more]
A0A3Q2FXQ6_CYPVA1.900e-4745.05Peptidyl-prolyl cis-trans isomerase n=3 Tax=Cyprin... [more]
A0A087Y7D1_POEFO3.810e-4744.55Peptidyl-prolyl cis-trans isomerase n=9 Tax=Poecil... [more]
A0A673C3C1_9TELE3.810e-4752.02Peptidyl-prolyl cis-trans isomerase n=2 Tax=Percom... [more]
A0A3Q2PZS5_FUNHE3.810e-4749.13Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fundul... [more]
A0A6P6Q9U7_CARAU4.860e-4752.57Peptidyl-prolyl cis-trans isomerase n=1 Tax=Carass... [more]
UPI001A981D655.800e-4751.45peptidylprolyl isomerase Fa n=1 Tax=Xiphias gladiu... [more]
PPIF_BOVIN6.560e-4751.45Peptidyl-prolyl cis-trans isomerase F, mitochondri... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 149..164
score: 74.71
coord: 72..87
score: 55.62
coord: 179..194
score: 42.44
coord: 101..113
score: 55.87
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 57..224
e-value: 2.9E-38
score: 131.6
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 55..226
score: 32.575985
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 43..227
e-value: 8.7E-60
score: 203.9
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 49..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 52..226
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 96..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_115_length_48887_cov_4.567628contigNODE_115_length_48887_cov_4.567628:19135..19995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3167.t1Gcaud3167.t1Gracilaria caudata M_176_S67 malemRNANODE_115_length_48887_cov_4.567628 19135..19995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3167.t1 ID=Gcaud3167.t1|Name=Gcaud3167.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=228bp
MGQAVSKSKSKSNPRPHITATFPGDPDHGQVVVRTTAVPTKVARPRLIHK
RIKCYLDVSIDGTPAGRIIVNLRPDVQPRTCENFRALCTGEHELSYQFCK
FHRIVPGFILQTGDVELKTKSKEGRGGRSIYGRSFADENLHKLSHNQYGV
LSMANAGPHTNNSQFMIVVDPKGTDWLDGKHTVFGHVAKESFPILTAIEE
CAQVFNRDDKQRARIIKTCQITDCGQL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf
IPR020892Cyclophilin-type_PPIase_CS