Gcaud7476.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7476.t1
Unique NameGcaud7476.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
BLAST of Gcaud7476.t1 vs. uniprot
Match: A0A2V3IST8_9FLOR (rRNA adenine N(6)-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IST8_9FLOR)

HSP 1 Score: 257 bits (657), Expect = 3.640e-81
Identity = 146/289 (50.52%), Postives = 187/289 (64.71%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNALLRLRNSRRAAGKTGGERSGVDGVMRLAEDFEMGVDDA--QDVRMHDDGDMDVEADDDDGDEAVDGMDVQFAKKTKGGTRKDGGVQHVLKSAVDAVWEESDFGTLR 254
            GNL+V+ L  CKKL+AYE+D RMIVE+YKRV++T  ESKL VI+GDVLKH +PYFD+CVANTPYQISSPL+FRLL+H   FR AVLMFQ EFA RL AKP                                  VE SVVR+EPR P P++ F EWDG+L+LCFQRKHRMLRA+F QKKVL  L   R + +A    GG +  V+ +MRL +   +  D A      M++D +MD  A++     + D M+V+FA K KGG RKDGG+++ +K  ++ V +E+DF TLR
Sbjct:   63 GNLTVKILERCKKLVAYEIDPRMIVEVYKRVQSTPVESKLQVIQGDVLKHAIPYFDICVANTPYQISSPLVFRLLAHRPMFRAAVLMFQREFAMRLIAKPGDPLYCRLSVNVQLLARVSHLMKVSRNNFRPPPKVESSVVRIEPRNPPPDISFEEWDGLLRLCFQRKHRMLRAIFTQKKVLKMLEEKRKTAKAL-SNGGVKQSVESIMRLGDSMNIDTDVAFQNAATMNEDLEMDPGAENG----SADQMEVEFAPKRKGGKRKDGGIENPMKKQLEQVLDETDFATLR 346          
BLAST of Gcaud7476.t1 vs. uniprot
Match: R7QLJ8_CHOCR (rRNA adenine N(6)-methyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLJ8_CHOCR)

HSP 1 Score: 191 bits (485), Expect = 3.290e-56
Identity = 122/278 (43.88%), Postives = 161/278 (57.91%), Query Frame = 0
Query:   24 MIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNALLRLRNSRRAAGKTGGERSGVDGVMRLAEDFEMGV-DDAQDVRM------HDDG---DMDVEADDDDGDEAVDGMDVQFAKKTKGGTRKDGGVQHVLKSAVDAVWEESDFGTLRDRE 257
            MIVE+YKRV+ ++ E++L VI+GDVLKH+LPYFD+CVANTPYQISSPL+FRLL+H   FR AVLMFQ EFA RLTAKP                                  VE SVVR+EPR P P ++F EWDGML++CFQRK+RMLRA+F QK VL  L   R +  + G  G + +   G+     D E+ + D+ Q +         +DG   DM  E  +  GD   + MDV  +       +K  G+   L+ +VD V +E+DF T+R +E
Sbjct:    1 MIVEVYKRVQGSSGENRLEVIQGDVLKHQLPYFDLCVANTPYQISSPLVFRLLAHRPMFRAAVLMFQREFALRLTAKPGDNLYCRLSVNVQLLARVNHLMKVAKNNFRPPPKVESSVVRIEPRNPPPLINFKEWDGMLRICFQRKNRMLRAIFLQKSVLRMLEEKRKTAHSLGTLGEDGTLTPGLNATTGDSELLMADEGQALSTLFASLGREDGKEDDMQEEDSEKVGDNVQEAMDVDASSGRSKTAKK--GINQALRESVDKVLKETDFATVRSKE 276          
BLAST of Gcaud7476.t1 vs. uniprot
Match: A0A2K1KX68_PHYPA (rRNA adenine N(6)-methyltransferase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KX68_PHYPA)

HSP 1 Score: 182 bits (463), Expect = 9.760e-52
Identity = 105/240 (43.75%), Postives = 150/240 (62.50%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNALLRLRNSRRAAGKTGGERSGVDGV-MRLAEDFEMGVDDAQDVRMHDDGD-MDVEADD 205
            GNL+++ L +CKK++A ELD RM++E+ +RV+ T + +KL VI+GD+LK ELPYFDVCVAN PYQISSP+ F+LLSH   FRCAV+MFQ EFAQRL A+P                                  V+ SVVR+EPR P P ++F EWDG+++LCF RK++ L ++F QK VL  + +   + +A  + GG  + V  V   +  D  +G D + +V ++ DGD M++E +D
Sbjct:  115 GNLTMKLLEVCKKVVAVELDPRMVLEVTRRVQGTPYANKLQVIQGDILKTELPYFDVCVANVPYQISSPITFKLLSHRPLFRCAVIMFQKEFAQRLVAQPGDSLFCRLSVNTQLLARVFHLLKVGKNNFRPPPKVDSSVVRIEPRNPLPPINFKEWDGLIRLCFNRKNKTLGSIFRQKAVLALIEKNYKTFQALQEAGGSEARVPAVDPSILGD--LGEDQSMEVDVNADGDGMEIEEED 352          
BLAST of Gcaud7476.t1 vs. uniprot
Match: A9SSA6_PHYPA (rRNA adenine N(6)-methyltransferase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SSA6_PHYPA)

HSP 1 Score: 179 bits (455), Expect = 1.190e-51
Identity = 90/181 (49.72%), Postives = 120/181 (66.30%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVL 148
            GNL+++ L +CKK++A ELD RM++E+ +RV+ T + +KL VI+GD+LK ELPYFDVCVAN PYQISSP+ F+LLSH   FRCAV+MFQ EFAQRL A+P                                  V+ SVVR+EPR P P ++F EWDG+++LCF RK++ L ++F QK VL
Sbjct:   59 GNLTMKLLEVCKKVVAVELDPRMVLEVTRRVQGTPYANKLQVIQGDILKTELPYFDVCVANVPYQISSPITFKLLSHRPLFRCAVIMFQKEFAQRLVAQPGDSLFCRLSVNTQLLARVFHLLKVGKNNFRPPPKVDSSVVRIEPRNPLPPINFKEWDGLIRLCFNRKNKTLGSIFRQKAVL 239          
BLAST of Gcaud7476.t1 vs. uniprot
Match: B8LLX1_PICSI (rRNA adenine N(6)-methyltransferase n=3 Tax=Pinidae TaxID=3313 RepID=B8LLX1_PICSI)

HSP 1 Score: 179 bits (453), Expect = 7.580e-51
Identity = 92/184 (50.00%), Postives = 118/184 (64.13%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNAL 151
            GNL+++ L + KK++A ELD RM++EL +RV+ T+   +L VI+GDVLK ELPYFDVCVAN PYQISSPL F+LLSH   FRCA++MFQ EFA RL AKP                                  V+ SVVR+EPR P P + F EWDGM++LCF RK++ L A+F QK +L+ L
Sbjct:   61 GNLTMKLLEVAKKVIAVELDPRMVLELQRRVQGTSSAIRLQVIQGDVLKSELPYFDVCVANIPYQISSPLTFKLLSHRPIFRCAIIMFQREFAMRLVAKPGDNLYCRLSVNTQLLARVSHLLKVGKNNFRPPPKVDSSVVRIEPRNPLPPISFKEWDGMVRLCFNRKNKTLGAIFRQKAILSLL 244          
BLAST of Gcaud7476.t1 vs. uniprot
Match: A0A6I9RM33_ELAGV (rRNA adenine N(6)-methyltransferase n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RM33_ELAGV)

HSP 1 Score: 178 bits (452), Expect = 1.180e-50
Identity = 91/184 (49.46%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNAL 151
            GNL+ + L + K ++A ELD RM++EL +R + T H S+L VI+GDVLK++LPYFD+CVAN PYQISSPL F+LLSH   FRCAV+MFQ EFA RL AKP                                  V+ SVVR+EPR+P P V+F EWDG+++LCF RK++ L ++F QK VL+ L
Sbjct:   58 GNLTKKLLEVAKSVVAIELDHRMVLELNRRFQGTPHSSRLKVIQGDVLKYDLPYFDICVANIPYQISSPLTFKLLSHRPLFRCAVIMFQREFAMRLVAKPGDSLYCRLSVNTQLLARVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVNFKEWDGLVRLCFNRKNKTLSSIFRQKSVLSLL 241          
BLAST of Gcaud7476.t1 vs. uniprot
Match: A0A820H3T5_9BILA (rRNA adenine N(6)-methyltransferase n=16 Tax=Bdelloidea TaxID=44578 RepID=A0A820H3T5_9BILA)

HSP 1 Score: 174 bits (442), Expect = 3.850e-50
Identity = 88/184 (47.83%), Postives = 117/184 (63.59%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNAL 151
            GNL+VR L   KK++AYE+D R++ EL KRV+ T  +SKL ++ GD+LK ELP+FD+CVAN PYQISSP +F+LL H   FRCA++MFQ EFAQRL AKP                                  VE SVVR+EP+ P P V++ EWDG+ ++CF RK+++L + F QKKV+  L
Sbjct:   21 GNLTVRLLEKAKKVVAYEIDPRLVAELQKRVQGTPFKSKLDIVIGDILKSELPFFDLCVANLPYQISSPFVFKLLLHRPIFRCAIVMFQREFAQRLVAKPGEKLYCRLSVNTQLLARVDHLMKIGKNNFRPPPKVESSVVRIEPKNPPPAVNYQEWDGLTRICFTRKNKLLSSEFKQKKVIELL 204          
BLAST of Gcaud7476.t1 vs. uniprot
Match: L8GNL9_ACACA (rRNA adenine N(6)-methyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GNL9_ACACA)

HSP 1 Score: 175 bits (443), Expect = 5.960e-50
Identity = 90/170 (52.94%), Postives = 114/170 (67.06%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP--------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNAL 151
            GNL+++ LPL KK++A ELD RM+ EL KRV+ TAH  KL +I  D +K  LPYFDVCVAN PYQISSPL+F+LLSH    RCAVLMFQ EFA RL A P                    VE SVVR++P+ P P ++F EWDG+++LCF RK++ L A+F  K V++ L
Sbjct:   63 GNLTMKMLPLVKKVIAVELDPRMVAELQKRVQGTAHGHKLELILCDFMKVNLPYFDVCVANVPYQISSPLVFKLLSHRPVPRCAVLMFQREFAMRLVAPPGDPLYCRLSISKHNFRPPPKVESSVVRIKPKNPPPPINFEEWDGLVRLCFTRKNKSLSAIFRAKSVIDLL 232          
BLAST of Gcaud7476.t1 vs. uniprot
Match: A0A388KWZ0_CHABU (rRNA adenine N(6)-methyltransferase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KWZ0_CHABU)

HSP 1 Score: 177 bits (448), Expect = 6.770e-50
Identity = 89/181 (49.17%), Postives = 117/181 (64.64%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVL 148
            GNL+V+ L + KK++A E+D RM+ EL +RV+ ++H S L VI+GD+LK ELPYFD+CVAN PYQISSP+ F+LLSH   FRCA++MFQ EFA RL AKP                                  V+ SVVR+EPR P P V+F EWDG+++LCF RK++ L A+F QK V+
Sbjct:   63 GNLTVKLLQVAKKVIAVEVDPRMVFELQRRVQGSSHASHLQVIQGDILKTELPYFDICVANIPYQISSPITFKLLSHRPIFRCAIIMFQREFAMRLVAKPGDSLYCRLSANAQLLSRVDHLLKVGKNNFRPPPKVDSSVVRIEPRNPLPPVNFKEWDGLVRLCFSRKNKTLGAIFRQKNVV 243          
BLAST of Gcaud7476.t1 vs. uniprot
Match: A0A2I0XDI4_9ASPA (rRNA adenine N(6)-methyltransferase n=2 Tax=Epidendroideae TaxID=158332 RepID=A0A2I0XDI4_9ASPA)

HSP 1 Score: 176 bits (447), Expect = 6.900e-50
Identity = 105/243 (43.21%), Postives = 145/243 (59.67%), Query Frame = 0
Query:    2 GNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLKHELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAKP----------------------------------VECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNALLRLRNSRRAA-----GKTGGERSGVDGVMRLAEDFEMGVDDAQDVRMHDDGDMDVEADD 205
            GNL+ + L + K ++A ELD RM++EL +R + T + ++L VI+GD+LK ELPYFD+CVAN PYQISSPL F+LLSH + FRCAV+MFQ EFA RL A P                                  V+ SVVR+EPRRP P V F EWDG+++LCF RK++ L ++F QK VL+ L +   + +A      G+   E++  D +  LA+  E    D+  V+  D+ +MDVE DD
Sbjct:   60 GNLTKKLLEVSKSVVAIELDPRMVLELNRRFQGTPYSNRLKVIQGDILKSELPYFDICVANIPYQISSPLTFKLLSHHSVFRCAVIMFQREFAMRLVANPGDNLYCRLSVNTQLLARVSHLLKVGRNNFKPPPKVDSSVVRIEPRRPLPPVSFKEWDGLIRLCFNRKNKTLGSIFKQKSVLSLLEKNYKTMQALQQAQNGQMEEEKASTDDLAVLADMIEDLSMDSYGVK--DEDEMDVEEDD 300          
The following BLAST results are available for this feature:
BLAST of Gcaud7476.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IST8_9FLOR3.640e-8150.52rRNA adenine N(6)-methyltransferase n=1 Tax=Gracil... [more]
R7QLJ8_CHOCR3.290e-5643.88rRNA adenine N(6)-methyltransferase n=1 Tax=Chondr... [more]
A0A2K1KX68_PHYPA9.760e-5243.75rRNA adenine N(6)-methyltransferase n=2 Tax=Physco... [more]
A9SSA6_PHYPA1.190e-5149.72rRNA adenine N(6)-methyltransferase n=1 Tax=Physco... [more]
B8LLX1_PICSI7.580e-5150.00rRNA adenine N(6)-methyltransferase n=3 Tax=Pinida... [more]
A0A6I9RM33_ELAGV1.180e-5049.46rRNA adenine N(6)-methyltransferase n=2 Tax=Arecac... [more]
A0A820H3T5_9BILA3.850e-5047.83rRNA adenine N(6)-methyltransferase n=16 Tax=Bdell... [more]
L8GNL9_ACACA5.960e-5052.94rRNA adenine N(6)-methyltransferase n=1 Tax=Acanth... [more]
A0A388KWZ0_CHABU6.770e-5049.17rRNA adenine N(6)-methyltransferase n=1 Tax=Chara ... [more]
A0A2I0XDI4_9ASPA6.900e-5043.21rRNA adenine N(6)-methyltransferase n=2 Tax=Epiden... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020598Ribosomal RNA adenine methylase transferase, N-terminalSMARTSM00650rADcneu6coord: 1..113
e-value: 7.5E-18
score: 75.3
NoneNo IPR availableGENE3D1.10.8.480coord: 120..264
e-value: 3.2E-12
score: 49.0
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 1..119
e-value: 1.2E-25
score: 92.2
NoneNo IPR availablePANTHERPTHR11727:SF7DIMETHYLADENOSINE TRANSFERASE-RELATEDcoord: 101..259
NoneNo IPR availablePANTHERPTHR11727:SF7DIMETHYLADENOSINE TRANSFERASE-RELATEDcoord: 1..101
NoneNo IPR availableCDDcd02440AdoMet_MTasescoord: 8..77
e-value: 0.00702953
score: 33.5575
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPFAMPF00398RrnaADcoord: 2..101
e-value: 1.6E-15
score: 56.9
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPANTHERPTHR11727DIMETHYLADENOSINE TRANSFERASEcoord: 1..101
coord: 101..259
IPR001737Ribosomal RNA adenine methyltransferase KsgA/ErmPROSITEPS51689SAM_RNA_A_N6_MTcoord: 1..101
score: 22.1108
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 2..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_589_length_21327_cov_4.162978contigNODE_589_length_21327_cov_4.162978:1207..2086 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7476.t1Gcaud7476.t1Gracilaria caudata M_176_S67 malemRNANODE_589_length_21327_cov_4.162978 1207..2086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7476.t1 ID=Gcaud7476.t1|Name=Gcaud7476.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MGNLSVRALPLCKKLLAYELDARMIVELYKRVRATAHESKLCVIKGDVLK
HELPYFDVCVANTPYQISSPLLFRLLSHPTPFRCAVLMFQHEFAQRLTAK
PVECSVVRVEPRRPRPEVDFAEWDGMLKLCFQRKHRMLRAVFGQKKVLNA
LLRLRNSRRAAGKTGGERSGVDGVMRLAEDFEMGVDDAQDVRMHDDGDMD
VEADDDDGDEAVDGMDVQFAKKTKGGTRKDGGVQHVLKSAVDAVWEESDF
GTLRDRETDECTSLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020598rRNA_Ade_methylase_Trfase_N
IPR001737KsgA/Erm
IPR029063SAM-dependent_MTases