Gcaud7579.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7579.t1
Unique NameGcaud7579.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length340
Homology
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BLAST of Gcaud7579.t1 vs. uniprot
Match: A0A2E2YJD2_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2YJD2_9PROT)

HSP 1 Score: 215 bits (547), Expect = 1.230e-60
Identity = 128/292 (43.84%), Postives = 165/292 (56.51%), Query Frame = 0 
Query:   31 FSCAAENQAKQEELYPDWNYDWEAPDGTK------QKLPLAWEPILESVDGCNGLS------NDYYKEFSFLVVLDKSWVDFYNRNRRAFRMQGFRTLVSSPKMLFNRVSYLYERQFGVRIRIKEVIPLPDLDMACETNNGDVDDGTFE-TSTLLQLEAEGVEFERGTAGIVRLGTGDLREEVYCDSYAPGGAICEEDFVTVSQELPFVDDGSGRIHYESVKTLAHEIAHLFE--VCDETPHCLNGHLINEVPDIMVWDGEPAINARPQGLFNKFLTACTPAYEDTLCRRVK 307
            F CA EN  KQ + +P  NY     +G +      Q     +EPILE V  CNGL       N +  E+ F+VVLDKSWVD+Y++ +R F  QG+ +L  SPK+LF+R SYL+E QFGVR+ I  VI L  L+  C    G VDDG  + T+T   L  + +       G+VRLG        YC SY+      +E  V V+ E PF  D SG + + +  TLAHE+AH F   V    PH LN H+ NE+PDIMVW+G P    RP G+F KFLTACTP Y++ LC  VK
Sbjct:  121 FDCALENDQKQLDAFP--NYISPRANGERSFTSGRQSFDTNFEPILEQVPHCNGLPWALDAVNRHLIEYQFIVVLDKSWVDYYDQYQRHFLTQGYESLEDSPKILFDRASYLFEAQFGVRVGISRVIVLDTLEQKCAATGGYVDDGVADNTNTSTALAEKNIVKLPTEIGVVRLGIDP--PNTYCASYSGVAPWQDELPVLVNTENPFSGD-SGLLRHRAAVTLAHELAHFFGIMVTPNHPHHLNAHVANEIPDIMVWNGIPIEAVRPDGMFFKFLTACTPVYDEYLCAGVK 407
The following BLAST results are available for this feature:
BLAST of Gcaud7579.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E2YJD2_9PROT1.230e-6043.84Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10Collagenase (Catalytic Domain)coord: 84..265
e-value: 2.5E-6
score: 29.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1159_length_13173_cov_4.339703contigNODE_1159_length_13173_cov_4.339703:2161..3180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7579.t1Gcaud7579.t1Gracilaria caudata M_176_S67 malemRNANODE_1159_length_13173_cov_4.339703 2161..3180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7579.t1 ID=Gcaud7579.t1|Name=Gcaud7579.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=340bp
MKSLGLAAAFMAAMATLHTVQARYEDLTDDFSCAAENQAKQEELYPDWNY
DWEAPDGTKQKLPLAWEPILESVDGCNGLSNDYYKEFSFLVVLDKSWVDF
YNRNRRAFRMQGFRTLVSSPKMLFNRVSYLYERQFGVRIRIKEVIPLPDL
DMACETNNGDVDDGTFETSTLLQLEAEGVEFERGTAGIVRLGTGDLREEV
YCDSYAPGGAICEEDFVTVSQELPFVDDGSGRIHYESVKTLAHEIAHLFE
VCDETPHCLNGHLINEVPDIMVWDGEPAINARPQGLFNKFLTACTPAYED
TLCRRVKRAPPRCGVVVPRNRRSSNFTKIVLRKSRKSIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf