Gcaud9385.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9385.t2
Unique NameGcaud9385.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length139
Homology
BLAST of Gcaud9385.t2 vs. uniprot
Match: A0A2V3IYB9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB9_9FLOR)

HSP 1 Score: 186 bits (473), Expect = 2.650e-57
Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 0
Query:    1 MLSLLGGDATALLSIIDLNTFQPNIASVINDYNARGVSMTTLNVRGHSFCPADKQMVLTSFSSAYGHHRVACALVHYVANSVFRAQRTMSINILSGGGVRDVLIAEWCNMYKLKTRLTPPQLIFVHCDS-RAFLLPVVV 138
            M  LL  DA ALLSI+DLNT Q +I +V+ND  AR VSMT LNVRGH+FC ADK+ VLTSF+SAYGHHRVAC LVHYVA+ VF     M+I++LSGGGVRDVLIA+WC  +KLKTR+TPP LI + C+S R FL+PVVV
Sbjct:   89 MCHLLQSDAAALLSIVDLNTHQSSIMAVLNDCAARAVSMTALNVRGHAFCMADKRPVLTSFTSAYGHHRVACELVHYVAHRVFAGYSRMAISVLSGGGVRDVLIADWCAQHKLKTRVTPPHLIILRCESQRLFLIPVVV 227          
BLAST of Gcaud9385.t2 vs. uniprot
Match: R7QKA2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKA2_CHOCR)

HSP 1 Score: 132 bits (331), Expect = 5.790e-36
Identity = 63/132 (47.73%), Postives = 89/132 (67.42%), Query Frame = 0
Query:    5 LGGDATALLSIIDLNTFQPNIASVINDYNARGVSMTTLNVRGHSFCPADKQMVLTSFSSAYGHHRVACALVHYVANSVFRAQRTMSINILSGGGVRDVLIAEWCNMYKLKTRLTPPQLIFVHCDSRA-FLLP 135
            L  +A A L+I+DLN ++ N+  +I+D++ RGVS++TLNV+ H+F   +KQ VL SF S YGH    C +  Y+A +VF  +  +SIN++SGGGVRDVLIA+WC  Y      TPPQ+I +   S A FL+P
Sbjct:   82 LSNEAAAFLAIVDLNLYRDNLLQIISDFSNRGVSISTLNVKAHAFIMNEKQGVLNSFKSFYGHQAWPCRVAEYIAGTVFGEETAISINVMSGGGVRDVLIADWCTFYYKTPTPTPPQIILLTAPSGAVFLIP 213          
The following BLAST results are available for this feature:
BLAST of Gcaud9385.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYB9_9FLOR2.650e-5767.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKA2_CHOCR5.790e-3647.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_559_length_22118_cov_3.843737contigNODE_559_length_22118_cov_3.843737:316..732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9385.t2Gcaud9385.t2Gracilaria caudata M_176_S67 malemRNANODE_559_length_22118_cov_3.843737 316..732 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9385.t2 ID=Gcaud9385.t2|Name=Gcaud9385.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=139bp
MLSLLGGDATALLSIIDLNTFQPNIASVINDYNARGVSMTTLNVRGHSFC
PADKQMVLTSFSSAYGHHRVACALVHYVANSVFRAQRTMSINILSGGGVR
DVLIAEWCNMYKLKTRLTPPQLIFVHCDSRAFLLPVVV*
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