Gcaud9211.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A2V3J532_9FLOR (Cytoplasmic 60S subunit biogenesis factor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J532_9FLOR) HSP 1 Score: 299 bits (765), Expect = 2.110e-96 Identity = 165/301 (54.82%), Postives = 202/301 (67.11%), Query Frame = 0
Query: 9 TDWMSSVNSVDVDGERDDAHDEDVVDVLHDDDDEAVEEALKQRLQEWREHDGFGGVFDDKWFADAHEALLHLQRGGLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAED--AELALPVGRLADGEGDGADEVALVVRDRVLGHRSLRQFYKQRVRGGDERAAVVAARGERQLLQLSRRDERGQLPLRVSQAAERRAQRMQLAVGRRNYYTRKARFRQRMAVLNSGYRA 307
++WMSS++S + DE+VVDV+ D +DE VE L++R+ EW HDGFGGVFD+ WF A EAL HLQ G+FV F ERLRD EGL+ YLSQKVGVGFAC+ C+R F S+ AARKHMRDVGH GMT D++ WM E+GEFYDWS A E +E A+P+ L GE DG DEV LVV D+V+GHRSL ++Y+QR RG +E AAVVA R ER++++LSRR + G LPLRV + A R R LAVGR NYY+RKARF+QRM VLNSGYRA
Sbjct: 107 SEWMSSIHSAS------EIADEEVVDVM-DGEDEQVEHTLQERMAEWGTHDGFGGVFDNVWFESAEEALEHLQGCGVFVAFHERLRDVEGLMRYLSQKVGVGFACIECDRVFRSSQAARKHMRDVGHCGMTDDDEAWMVEFGEFYDWSGGAKREEDEEEGWEEVENEEELGDMAGVVVVREQKASESAMPILALEKGEEDGRDEVGLVVGDKVVGHRSLARYYRQRARGVEESAAVVAVRQERRMMELSRRAKDGTLPLRVRRLAALRESRFALAVGRGNYYSRKARFKQRMVVLNSGYRA 400
BLAST of Gcaud9211.t1 vs. uniprot
Match: R7QSX5_CHOCR (C2H2-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSX5_CHOCR) HSP 1 Score: 189 bits (480), Expect = 5.530e-54 Identity = 121/272 (44.49%), Postives = 160/272 (58.82%), Query Frame = 0
Query: 40 DDEAVEEALKQRLQEWREHDGFGGVFDDKWFADAHEALLHL-QRGGLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVG-RLADGEGDGADEVALVVRDRVLGHRSLRQFYKQRVRGG-DERAAVVAARGERQLLQLSRRDE-RGQLPLRVSQAAERRAQRMQLAVGRRNYYTRKARFRQRMAVLNSGYRA 307
DD AV+ L++RL E R +G +FD+ E + ++ +R G FVP+ ERL+D +GL+ YL QKVGVG+ACV C+R FG+ ARKHMRD H MT DE+DWM EYGEFY++ + DG E+ + VG + + E A+EV L V +VLGHRSLR++Y+Q G DERAAVVA R R+ L + R + ++ + RR QR QL+VG +NYYTRKARF+Q MAV NSGYRA
Sbjct: 125 DDTAVQMELERRLAESRGLEGRECLFDESVHESVEENIKYMAKRYGFFVPYVERLKDVDGLMRYLGQKVGVGYACVECDRAFGAVADARKHMRDKAHCKMTADEEDWMAEYGEFYEFEGD--DG---------------------WEEVGEEEGAVVDVGGEVVEREEVNAEEVGLAVNGKVLGHRSLRRYYEQSAGGHVDERAAVVANRVMREYRLLGWEGKGRDAVAVKKMRRETRRDQRFQLSVGGQNYYTRKARFKQSMAVFNSGYRA 373
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A1X6PBD0_PORUM (C2H2-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBD0_PORUM) HSP 1 Score: 119 bits (299), Expect = 6.520e-27 Identity = 96/289 (33.22%), Postives = 131/289 (45.33%), Query Frame = 0
Query: 64 VFDDKWFADAHEALLHLQRG-GLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFY----------DWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVGRLADGEGD-----------------GADEVALVV----------RDRVLGHRSLRQFYKQRVRGGDERAAVVAARGERQLLQLSRRDERGQLPLRVSQAAERRAQRMQLA--------VGRRNYYTRKARFRQRMAVLNSGYR 306
VFD K A L H+ G F+P+ E L D GL+ YL +KVG+G+ACV C+R F S +A ++HM D H+ M D++ W++EY F+ D +A+ DG T A V +LA G G G D+V V+ RVLGHR L ++YKQR + R A +A R R + L+ + G +S+ A + QRMQL VG+ NYYTRKA R ++ VLNSGYR
Sbjct: 204 VFDGKACASVEANLAHMASAHGFFMPYIEHLVDAPGLLAYLGEKVGLGYACVACDRPFTSVEAVQRHMVDKAHKRMVDDDERWVDEYAPFFTADDDEEGEADAAADGEDGEWEEVEDDGEAAELLEAAGLSAKATTTSGVAA--VVQLAGGGGPADRQVVATADAADPPLRGGDDVGEVMDKITSSLVLPNGRVLGHRDLARYYKQRPAPAEARDAAIARRTMRSSV-LNNYNRIGWAGPAMSKVAA-KDQRMQLLRFKRDHLRVGQSNYYTRKAAIRPQLGVLNSGYR 488
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A5J4YQS6_PORPP (Cytoplasmic 60S subunit biogenesis factor REI1-like 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQS6_PORPP) HSP 1 Score: 110 bits (276), Expect = 4.130e-24 Identity = 86/275 (31.27%), Postives = 132/275 (48.00%), Query Frame = 0
Query: 42 EAVEEALKQRLQEWREHDGFGGVFDDKWFADAHEALLHLQRG-GLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVGRLADGEGDGADE-----VALVVRD-RVLGHRSLRQFYKQRVRGGDERAAVVAARGERQLLQ---LSRRDERGQLPLRVSQAAERRAQRMQLAVGRRNYYTRKARFRQRMAVLNSGYR 306
EA EE L+ RL+E R VFD L ++ + F+P+ E + D EG++ YL +KVGVG+AC+ C R FGS AA+ HM H ++++WMEE+G++Y + DG A A +AL + D G GA + V LV+ + + +G+ + +++Y Q+ + G R+ V AR + L + L ++ L V ER ++ +G + YYTRK+ R M VLNSGYR
Sbjct: 147 EAAEEELETRLEEARPFSACECVFDGHTSDSTEHNLAYMAKAFSFFLPYAEFVLDLEGILSYLGEKVGVGYACICCSREFGSVYAAQAHMVAKSHCKFPPEDEEWMEEFGDWYAFEEEEQDG-----------------WEELSGDEAARAMIALEKQQAHDARGTGASDGYEEAVELVLPNGKRVGNMAFKRYYDQKPKPG--RSLVHQARLNKVLAEYRALGWHEKPRNEVLEVRAKFERIQKKKSQQLGVKTYYTRKSSLRPDMGVLNSGYR 402
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A7S0ZC57_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC57_9RHOD) HSP 1 Score: 97.4 bits (241), Expect = 3.890e-20 Identity = 78/237 (32.91%), Postives = 113/237 (47.68%), Query Frame = 0
Query: 64 VFDDKWFADAHEALLHLQRG-GLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVGRLADGEG---DGADEVALVVRD-RVLGHRSLRQFYKQRVRGGDERAAVVAARGERQLLQ---LSRRDERGQLPLRVSQAAERRAQRMQLAVGRRNYYTRKA 292
VFD DA + ++ R G FVP+ E + D GL+ YL +KVGVG+ACV C+R F S A + HM H MT ++D WMEE+ E+YD+ DG D + + G D EG +G + V LV+ + + +GHRSL+++Y Q + G R+ AAR +R + Q L Q+ + +R L +G + YYTRKA
Sbjct: 34 VFDMHLSTDAEQNAEYMARKFGFFVPYVEHVADLTGLLTYLGEKVGVGYACVCCDRGFSSVSAVQSHMIAKSHCKMTPEDDLWMEEFAEWYDFGEE--DGEEWEEVVGNEAEEYLQKL-------GADGTMMVLNGNHEDDEGIDVEGEEAVELVLANGKHVGHRSLKKYYDQSSKPG--RSPQEAARLQRIMAQYKSLGWYSGGEQISHETQRKMREIRKRKDLKLGVKTYYTRKA 259
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A7S2ZAQ4_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAQ4_9RHOD) HSP 1 Score: 90.5 bits (223), Expect = 9.340e-17 Identity = 82/283 (28.98%), Postives = 112/283 (39.58%), Query Frame = 0
Query: 64 VFDDKWFADAHEALLHLQRGGLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSAN--ATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVGRLADG-----------------------------------EGDGADEVALVVRDRVLGHRSLRQFYKQRVRGGDERAAVVAAR--GERQLL-QLSRRDERGQLPLRVSQAAERRAQRMQLAVGRRNYYTRKARFRQRMAVLNSGYR 306
+ DD H A LH G F+P+ E L E L+ YL +KVGVG+ACV C R F + + +KHM D H M E +W +EYGEFY W DG A E D A E+ L RV GHRS+ ++YKQ R + R +V R GE +++ Q S ++ LP R ++RR + V +R YY K + +A++NSGYR
Sbjct: 158 ISDDVEANAKHMAKLH----GCFIPYVESLLSIESLLTYLGEKVGVGYACVFCSRSFSAVFSVQKHMIDKNHSRMIDSEQEWYDEYGEFYAWEDEDGMADGEEWEEVVGEEREMILSKHEAGVDREGNGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITEDDTAVELVLNSGTRV-GHRSMLRYYKQAPRPRETRDSVQLTRIMGEYRMIGQGSVSSKQVALPSRKQLESKRR---LDNQVSKRQYYIGKLKANTNIAIMNSGYR 432
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A7S0BGD5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGD5_9RHOD) HSP 1 Score: 87.0 bits (214), Expect = 9.380e-17 Identity = 61/213 (28.64%), Postives = 95/213 (44.60%), Query Frame = 0
Query: 97 EGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVGRLADGEGDGADEVALVVRDRVLGHRSLRQFYKQRVRGGDERAAVVAARGERQLLQLSR---RDERGQLPLRVSQAAERRAQRMQLAVGRRNYYTRKARFRQRMAVLNSGYR 306
E L+ YL QKVGVG+ACV C R F + + +KHM D H M E +W +EYGEFY W E ++P + DG ++ ++GHRS+ ++YKQ R + R +V+ ++ + + ++ LP R ++RR + V +R YY K + +A++NSGYR
Sbjct: 1 ESLLTYLGQKVGVGYACVFCSRSFSAVFSVQKHMSDKNHSRMIDSEQEWYDEYGEFYAWEDENVLNDGEEWEEVVGEERELILSRHEAGIDREAISASVPEDTTS---ADGTAVELVLNSGAMVGHRSMLRYYKQAPRPRETRDSVLLTSIMQEYRMIGQGYVSKKQAALPGRKQLESKRR---LDNHVSKRQYYIGKLKANTNIAIMNSGYR 207
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A7S2Z9I7_9RHOD (Hypothetical protein (Fragment) n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9I7_9RHOD) HSP 1 Score: 86.7 bits (213), Expect = 6.530e-16 Identity = 41/92 (44.57%), Postives = 52/92 (56.52%), Query Frame = 0
Query: 64 VFDDKWFADAHEALLHLQRGGLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDW 155
+ DD H A LH G F+P+ E L E L+ YL +KVGVG+ACV C R F + + +KHM D H M E +W +EYGEFY W
Sbjct: 158 ISDDVEANAKHMAKLH----GCFIPYVESLLSIESLLTYLGEKVGVGYACVFCSRSFSAVFSVQKHMIDKNHSRMIDSEQEWYDEYGEFYAW 245
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A1E4TYW2_PACTA (C2H2-type domain-containing protein n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TYW2_PACTA) HSP 1 Score: 79.0 bits (193), Expect = 8.150e-13 Identity = 60/213 (28.17%), Postives = 100/213 (46.95%), Query Frame = 0
Query: 48 LKQRLQEWREHDGFGGVFDDKWFADAHEALLHLQRG-GLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSANATDGAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELALPVGRLADGEGD------GADEVALVVRDRVLGHRSLRQFYKQRVRG----GDERAAVVAARGER 249
LK R++ + H +F +K + + E++ H+ + GL++P ++ L D+EGL+ YLS+K+G+G C++C S +A R HM H + + +D E EFYD+S+ D D+E G L+DGE E+ L V+GHRSL+++Y+Q +R + + V+AA R
Sbjct: 170 LKNRVEIPKNH----CLFCNKKYPNLDESVNHMFKNHGLYIPEQKYLVDKEGLIQYLSEKIGLGNICIVCSYQGRSIEAVRAHMLSKSHCKIPYETEDEKLEISEFYDFSSTYQDSNSPSKSKIVIQDAKESTGEEDDEWEDVDSEDEESTGDLSDGEVPQELSYYNGYELHLP-SGAVVGHRSLQRYYRQNLRPDLVLSEGQGTVIAAETRR 377
BLAST of Gcaud9211.t1 vs. uniprot
Match: A0A2R5G4J6_9STRA (Cytoplasmic 60S subunit biosis factor REI1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4J6_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.670e-12 Identity = 83/232 (35.78%), Postives = 118/232 (50.86%), Query Frame = 0
Query: 42 EAVEEALKQRLQEWREHDGFGGVFDDKWFADAHEALLHLQRG-GLFVPFRERLRDEEGLVHYLSQKVGVGFACVLCERCFGSADAARKHMRDVGHRGMTGDEDDWMEEYGEFYDWSA-NATD--------GAXXXXXXXXXXXXXXXXXXXXXXXTAEDAELAL-----PVGRLADGEGDGAD--EVALVVRD----RVLGHRSLRQFYKQRVRGGDERAAVVAARGERQLL 252
E EE L++++ D D D L ++ + G ++P E + D +GL Y SQKV G C+ C+R F S AA +H+ D GH + + D+ +EEY +FYD++A N TD XXXXX XXXXXXXXXX EDA+ + P R + + D E+A++ D RV+GHR + YKQR + + R A++AA ER LL
Sbjct: 122 EVDEEQLRRKV------DPCECFIDGHMSEDLEGTLAYMHKKYGFYIPDAEYVCDWQGLYKYCSQKVRAGKLCLYCDRPFKSGQAAIQHIVDKGHCKLPWESDEDLEEYEDFYDFTALNDTDEEGDEXXXXXXXXXXEMADAXXXXXXXXXXADTPREDAKKSASSSSKPKSRRTRIKHELLDNGEIAIINEDTGERRVMGHRDYKWIYKQRFQPEETRPALLAASKERLLL 347 The following BLAST results are available for this feature:
BLAST of Gcaud9211.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud9211.t1 ID=Gcaud9211.t1|Name=Gcaud9211.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=308bpback to top |