Gcaud7576.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7576.t1
Unique NameGcaud7576.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length314
Homology
BLAST of Gcaud7576.t1 vs. uniprot
Match: R7QF31_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF31_CHOCR)

HSP 1 Score: 412 bits (1059), Expect = 4.320e-143
Identity = 208/250 (83.20%), Postives = 227/250 (90.80%), Query Frame = 0
Query:   61 SSSSQPSATPTLVQPVFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNAQ 310
            SS   P  TP +  P FAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLA MDGSGSQIGLIFFSH DALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKP PSGIRG+ GEE+TMVFRF+PDSKQVKAAEGLQRK+R    V+G+PVFVAKGLTLRKG+EN+VPLFLTKEDLD++W+KLR+SNKDLPN+A V VGNLLYIIQQME+D +PELR LGFFAP+ASVEYV+KEQAGPTGQAR+HQNPV  Q
Sbjct:    2 SSPDAPLLTP-VAAPAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPQPSGIRGAAGEELTMVFRFFPDSKQVKAAEGLQRKLRRRRGVEGIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYVTKEQAGPTGQARMHQNPVTPQ 250          
BLAST of Gcaud7576.t1 vs. uniprot
Match: A0A2V3IZ91_9FLOR (Protein TIC 22, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ91_9FLOR)

HSP 1 Score: 388 bits (997), Expect = 2.120e-134
Identity = 195/203 (96.06%), Postives = 199/203 (98.03%), Query Frame = 0
Query:  111 MDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNAQQNK 313
            MDGSGSQIGLIFFSHLDALNMLKDM+KNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSS+VQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNK LPNSAPVAVGNLLYIIQQME+DEQP+LR LGFFAPRASVEYVSKEQAGPTGQARLHQNPVN Q NK
Sbjct:    1 MDGSGSQIGLIFFSHLDALNMLKDMQKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKHLPNSAPVAVGNLLYIIQQMESDEQPQLRNLGFFAPRASVEYVSKEQAGPTGQARLHQNPVNPQNNK 203          
BLAST of Gcaud7576.t1 vs. uniprot
Match: A0A7S0MD44_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MD44_9CRYP)

HSP 1 Score: 231 bits (589), Expect = 6.730e-71
Identity = 114/213 (53.52%), Postives = 153/213 (71.83%), Query Frame = 0
Query:   80 AKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKE 292
            AKFS K   +KLSQVPVFAVTN+SGQPYLA  +  G Q+GLIFFSH DAL +L+ M+K    SDAR+YIMGLDKAY+MV +    SGI+G  G+E+ M+FRFYP+ KQ+K A  +   +  S   +GVP+F+A GLT+RKGNE+I+P+FLTKEDLD +W K+  +N D+     + +G+L+ II+ ME ++  +  K GFF P+ S E+V KE
Sbjct:   89 AKFSNKNFYQKLSQVPVFAVTNSSGQPYLAN-NSKGEQVGLIFFSHEDALGLLRAMQKARQVSDARIYIMGLDKAYKMVLSNAASSGIKGYQGQELKMIFRFYPNQKQIKYANSIVNGINFSEKFKGVPIFIADGLTIRKGNEDIIPIFLTKEDLDEAWLKMSLNNPDINPKPTILIGDLIKIIRTMENNKN-DYCKFGFFPPKESTEFVKKE 299          
BLAST of Gcaud7576.t1 vs. uniprot
Match: A0A7J7IP27_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP27_9RHOD)

HSP 1 Score: 228 bits (581), Expect = 5.190e-69
Identity = 119/240 (49.58%), Postives = 168/240 (70.00%), Query Frame = 0
Query:   80 AKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPG--ASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMET----------DEQPELRKLGFFAPRASVEYVSKEQAGP-TGQARLHQNP 306
            A++S+KT+ EKL+QVPVFAVTN SGQP+LA M+  G+Q+GLIFF   DA+ ML+D+K++ G  A DAR+++MGLD+A+EMVK+KP PSG+RG  G+E+ MVFRFYP+ +QV+ A  L RK +    V+GVP FVAKGLTLRKG E ++P+FL K DL+ +W++LR+   DLP    V VG+L+ +I ++E            E  ++R++ FF    SVE++ +E      G AR+H  P
Sbjct:  133 ARYSRKTLDEKLAQVPVFAVTNESGQPFLAAME-RGTQVGLIFFDPSDAMKMLEDLKRSSGKEAEDARIFVMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQVEHARSLARKTK-QPLVRGVPCFVAKGLTLRKGKEFVIPVFLDKRDLEDAWSRLRQDMSDLPKHPEVEVGDLIEVILRLEEAAKNPKSLDEKELQDIRRVAFFPSSKSVEFMKQESMKQFKGTARMHARP 370          
BLAST of Gcaud7576.t1 vs. uniprot
Match: M1URJ3_CYAM1 (Similar to chloroplast inner membrane protein Tic22 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1URJ3_CYAM1)

HSP 1 Score: 226 bits (577), Expect = 1.650e-68
Identity = 119/240 (49.58%), Postives = 168/240 (70.00%), Query Frame = 0
Query:   80 AKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPG--ASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMET----------DEQPELRKLGFFAPRASVEYVSKEQAGP-TGQARLHQNP 306
            A++S+KT+SEKL+QVPVFAVTN SGQP+LA M+  G Q+GLIFF   DA+ ML+D+K++ G  A DAR++IMGLD+A+EMVK+KP PSG+RG  G+E+ MVFRFYP+ +Q++ A  + +K +    V+GVP FVAKGLTLRKG E ++P+FL K DLD +W +LR+   +LP    + VG+L+ +I ++E            E  +LR++ FF    SVE++ +E A    G AR+H  P
Sbjct:  125 ARYSRKTLSEKLAQVPVFAVTNESGQPFLAAME-RGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQLEYARTVAKKTK-QPTVRGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNRLRQELAELPKQPEIEVGDLIEVILRLEEAAKNPKSLNETELQDLRRVAFFPSSKSVEFMKRESAKQFKGTARMHSRP 362          
BLAST of Gcaud7576.t1 vs. uniprot
Match: A0A1X6NSW5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSW5_PORUM)

HSP 1 Score: 221 bits (562), Expect = 6.840e-67
Identity = 121/222 (54.50%), Postives = 143/222 (64.41%), Query Frame = 0
Query:   88 SEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQ--GVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKEQAGPTGQARLHQNPV 307
            S KL+QVPVFAVTNA GQPYLA +DG+G+Q+GLIFFSH +AL+M  DM+K+P  +DARVYIMGLDKAYEMVKAKPTPSGIRG  GEE+ MVFRF PD KQV  A  L R + +    +  GVPVF A GLTLRK  E +VPLFL KED                                ME+   PEL +  F AP AS EY+  +Q G +  AR+HQNP+
Sbjct:  121 SAKLAQVPVFAVTNAGGQPYLANVDGAGTQVGLIFFSHEEALSMQADMQKSPTTADARVYIMGLDKAYEMVKAKPTPSGIRGPAGEELRMVFRFSPDRKQVGHAARLLRAVPIGGGGETAGVPVFAAPGLTLRKAGEPVVPLFLAKED--------------------------------MESGVHPELARHAFVAPTASTEYMQSQQGGASKNARMHQNPL 310          
BLAST of Gcaud7576.t1 vs. uniprot
Match: A0A5J4Z7G8_PORPP (Protein TIC 22, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7G8_PORPP)

HSP 1 Score: 219 bits (558), Expect = 8.470e-66
Identity = 115/246 (46.75%), Postives = 163/246 (66.26%), Query Frame = 0
Query:   69 TPTLVQPVFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMR-LSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMET-------DEQPELRKLGFFAPRASVEYVSKEQAGPTGQARLHQNP 306
            T  LV    A  ++SK +V EKLSQ+ VFAVTNA+GQPYLA  DG  +Q+GLIFFS  DA  M  +M KNP  +DA+++ M LDKA++MV+++P  SGIRG  G+E++MVFRFYPDS+ +KAA    +K+R L  + QGVPVF A+GL++RKG E I P F T EDL+A+W K+R  N  +P+   V + +LL ++  +E        ++  +L  +GF     +++Y+ K Q G +  AR+H NP
Sbjct:  102 TAPLVPAANAVIRYSKMSVKEKLSQIAVFAVTNAAGQPYLANSDGE-NQVGLIFFSIDDAYKMQMEMHKNPSTADAKIFSMSLDKAFDMVRSEPQSSGIRGPNGKELSMVFRFYPDSEAMKAANDPLKKLRSLKKSFQGVPVFSARGLSIRKGGEMIKPFFFTMEDLNAAWNKMRRENGGVPSRPQVDIEDLLVLVSALEKYTGEHAEEQDAQLVTVGFVPSSRTLDYLKKSQTGSSRTARMHANP 346          
BLAST of Gcaud7576.t1 vs. uniprot
Match: M2XPU8_GALSU (Chloroplast inner membrane import protein Tic22 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XPU8_GALSU)

HSP 1 Score: 207 bits (528), Expect = 1.160e-61
Identity = 103/221 (46.61%), Postives = 147/221 (66.52%), Query Frame = 0
Query:   74 QPVFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKEQA 294
            QPV AA    KK +  KLSQVPVFAVTN+ GQPYL +      Q G IFFS  DA  M+  +K+  G  D +++++GLDKAYEMV   PT SG++   G E+ M F  +PDS+QV+ A  L ++ +   A  G+PVFVA+GL LRKG+E+ VP+FL K+DL+ +W +LRES+K LP    + + +L  +++++E  ++ ELR LGFFA R S+E++   Q+
Sbjct:  100 QPVLAAGLKVKKNLKSKLSQVPVFAVTNSDGQPYLVEDGNDKVQKGYIFFSPEDAGRMMTKVKQANGTEDIQIHVIGLDKAYEMVSNPPTSSGLKDEEGRELMMTFLLHPDSEQVQKARELLKREKKKPAFDGIPVFVARGLMLRKGDESNVPVFLDKDDLELAWKRLRESDKSLPQHPVIEIADLFQLLKEIEKGDKEELRSLGFFASRKSIEWIRNHQS 320          
BLAST of Gcaud7576.t1 vs. uniprot
Match: A0A7S3A3T2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3T2_9RHOD)

HSP 1 Score: 206 bits (525), Expect = 2.110e-61
Identity = 105/235 (44.68%), Postives = 156/235 (66.38%), Query Frame = 0
Query:   73 VQPVFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKEQAGPTGQARLHQNPV 307
            V+   A   +  K++  KL+QVPVF +T+A GQPYLA ++ S  Q+GLIFFS  DA  +++ MK N GA +AR++ + LDKA EMVKAKPTPSG++  GG+++ MVFR YPD+ QVK A  +    R   A   +P+FVA+GL +RKG E + P+F TKEDL+++W +LR  N  LP    + V +L  I+++ME  ++  LR  GF+ P  SV ++ +++   +G+ R+H NP+
Sbjct:   74 VESALAGTLYKNKSIVGKLAQVPVFLITSAGGQPYLATLEES-RQVGLIFFSIEDATKVMEQMKMNAGAEEARIFPLTLDKAMEMVKAKPTPSGLKSQGGQDLMMVFRLYPDTAQVKNAGSVLG--RRQGASNTIPLFVARGLVVRKGREEVQPMFFTKEDLESNWNRLRSENPKLPRRPNIEVYSLQDIVEKMENGDEA-LRGWGFYPPSRSVSFMEEQKEKKSGKTRMHINPL 304          
BLAST of Gcaud7576.t1 vs. uniprot
Match: F2HH75_9CRYP (Translocator of the inner chloroplast membrane n=1 Tax=Cryptomonas paramecium TaxID=2898 RepID=F2HH75_9CRYP)

HSP 1 Score: 191 bits (484), Expect = 2.450e-55
Identity = 100/218 (45.87%), Postives = 139/218 (63.76%), Query Frame = 0
Query:   75 PVFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPNSAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKE 292
            P F+ A+FS K   +KLSQ+PVFA+TN+SGQPYL        QIGLIFFSH DAL +L  MK     SDAR+YIMGLD+AY MV A  T + +     ++   +FRFYPD KQVK A  +  K+     ++ +PVFVA GL ++KG +++ P+F +KEDL+ +W K+   N D+     V V +LL I++ ME DE+    K GFF  + ++E++ KE
Sbjct:   79 PFFSHARFSSKNYYQKLSQIPVFAITNSSGQPYLTT-GPEKEQIGLIFFSHEDALALLTAMKNTHQVSDARIYIMGLDRAYRMVTADKTKNQLN----QDFKTIFRFYPDQKQVKNASLIVNKLNFYKTIRDIPVFVADGLVVKKGKDSMTPVFFSKEDLEKTWKKMISENPDINVKPTVLVVDLLKILKAMENDEKI-FSKFGFFPSQKNIEFIKKE 290          
The following BLAST results are available for this feature:
BLAST of Gcaud7576.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QF31_CHOCR4.320e-14383.20Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IZ91_9FLOR2.120e-13496.06Protein TIC 22, chloroplastic n=1 Tax=Gracilariops... [more]
A0A7S0MD44_9CRYP6.730e-7153.52Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7IP27_9RHOD5.190e-6949.58Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1URJ3_CYAM11.650e-6849.58Similar to chloroplast inner membrane protein Tic2... [more]
A0A1X6NSW5_PORUM6.840e-6754.50Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z7G8_PORPP8.470e-6646.75Protein TIC 22, chloroplastic n=1 Tax=Porphyridium... [more]
M2XPU8_GALSU1.160e-6146.61Chloroplast inner membrane import protein Tic22 n=... [more]
A0A7S3A3T2_9RHOD2.110e-6144.68Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
F2HH75_9CRYP2.450e-5545.87Translocator of the inner chloroplast membrane n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007378Tic22-likePFAMPF04278Tic22coord: 43..285
e-value: 2.2E-32
score: 112.3
IPR007378Tic22-likePANTHERPTHR33926PROTEIN TIC 22, CHLOROPLASTICcoord: 23..298
NoneNo IPR availableGENE3D3.40.1350.100coord: 86..291
e-value: 1.4E-40
score: 141.1
NoneNo IPR availableGENE3D3.40.1350.100coord: 183..280
e-value: 1.4E-40
score: 141.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR33926:SF4PROTEIN TIC 22, CHLOROPLASTICcoord: 23..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1149_length_13302_cov_3.963742contigNODE_1149_length_13302_cov_3.963742:10068..11009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7576.t1Gcaud7576.t1Gracilaria caudata M_176_S67 malemRNANODE_1149_length_13302_cov_3.963742 10068..11009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7576.t1 ID=Gcaud7576.t1|Name=Gcaud7576.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=314bp
MSAAPQPARQTADSSSSSSSSTTTTASTTSPFPWRSFAVSTTAAALATII
TPIVHNSLHSSSSSQPSATPTLVQPVFAAAKFSKKTVSEKLSQVPVFAVT
NASGQPYLAKMDGSGSQIGLIFFSHLDALNMLKDMKKNPGASDARVYIMG
LDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRL
SSAVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKDLPN
SAPVAVGNLLYIIQQMETDEQPELRKLGFFAPRASVEYVSKEQAGPTGQA
RLHQNPVNAQQNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like