Gcaud7309.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7309.t1
Unique NameGcaud7309.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length510
Homology
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A2V3IX05_9FLOR (WD repeat-containing protein JIP5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX05_9FLOR)

HSP 1 Score: 432 bits (1111), Expect = 3.820e-145
Identity = 216/369 (58.54%), Postives = 267/369 (72.36%), Query Frame = 0
Query:   27 AWYLGLKYAPICVAAHTSKPCLLSGFSEGEIALNVFSSTCGSSGPELKQRELYDIESSCVQTTFLGSDSFVVGTSEGELLTFDVSRTTSLGTKRLPDGEDGNPCTITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVLDYPIHSEESE--NDSLDTLRKRKXXXXKRKEDRWPVEDMVKVRGLNVPVFALLGHGSGIQFCDGSGLIEESSAE 393
            A YL L  APIC+ AH S+P LL+  S     ++          P  K    Y +E S    +F  +  F +  ++  +LTFD+++   + T  L   E  + C  T FR ++E++FL GDD GGLHL+D RTS + S        ++  SCLEQADY+SAI PVSAFEKDAFLVTSGDGTLCAYDLR PPKP ++LQYAFDSFQED+LSLA+LPKH+LAV+GTLTGPLNIY+LRFMDDS+DPDSAAHVDRFYGHPEAVNVVMAWEE+ED+++SASSDGI+RIID+P+RKLVGVL+Y +H EE    NDSL  LRKR+    KRKE RWPVE MV+VRGL +PV ALLGH +GIQFC+   L++  S +
Sbjct:   12 AKYLQLHEAPICLDAHPSQPLLLTACSTSGATVSDVKPIFSRQSPR-KAAPRYKVEHSAAAASFFDASRFHLACTDASILTFDINKREPIATVTLSKAEQSDDCVATTFRTVNENSFLVGDDTGGLHLYDVRTSSAASQ-------QALASCLEQADYVSAIEPVSAFEKDAFLVTSGDGTLCAYDLRFPPKPAVRLQYAFDSFQEDVLSLAILPKHNLAVAGTLTGPLNIYDLRFMDDSYDPDSAAHVDRFYGHPEAVNVVMAWEEEEDIVLSASSDGIVRIIDIPNRKLVGVLEYAVHEEERRGTNDSLQDLRKRREGKKKRKEARWPVEHMVRVRGLGMPVLALLGHSAGIQFCEAGALVDGDSCD 372          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A5J4XDF7_9CHLO (Uncharacterized protein (Fragment) n=2 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XDF7_9CHLO)

HSP 1 Score: 104 bits (260), Expect = 7.190e-21
Identity = 82/288 (28.47%), Postives = 143/288 (49.65%), Query Frame = 0
Query:   42 HTSKPCLLSGFSEGEIALNVFSSTCGSSGPELKQRELYDIESSCVQTTFLGSDSFVVGTSEGELLTFDVSRTTSLGTKRLPDGEDGNPCTITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPI 325
            H ++  L +G   G++ ++ +S    +      Q+ L+      VQ + LG D+ + G+++  ++  D        T+     ++ +P  I+   VL E++F++GDD G +  +D R  +S            T S     D++S +  V    +   +  SGDGTL   DLR     K++ Q   D+  ++LLS+ ++      VSGT +G +N+Y+   MDD  D        RF GHP +V+ ++ +  D D +I+ SSDGIIRI+++   +++GVL    D PI
Sbjct:    7 HPAECLLATGIITGQVRISEYSE---NGATRKSQKRLHSESCRAVQFSALG-DALLSGSADKSIVLLDTGTCKVQRTQ-----QNAHPTGISRMAVLSETSFVSGDDNGLIKTWDQRQPES------------TASFEAHTDFVSDM--VLHEREQCLVAVSGDGTLTINDLRTN---KVRAQSENDA-DDELLSVVLVKGDKKVVSGTQSGVINLYSWGHMDDCSD--------RFPGHPSSVDALVKY--DADTVITGSSDGIIRIVNILPNRMLGVLGGSEDLPI 257          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A7S3B5K8_9VIRI (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B5K8_9VIRI)

HSP 1 Score: 99.0 bits (245), Expect = 2.020e-20
Identity = 60/151 (39.74%), Postives = 94/151 (62.25%), Query Frame = 0
Query:  180 EQADYISAISPVSAFE--KDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYP 324
            + +DYISA+S   +F+  +   L TSGDGTL  +DLR     K KL++  D+ +++LLSLAVL +    V+G+  G LNIY+   ++D  D        R  GHPE+V+ ++  + DED +I+ASSDG++R++ +   +LVGV+    D+P
Sbjct:   16 KHSDYISALSGGGSFDGGEHTLLATSGDGTLSGFDLR-----KGKLEHRSDNQEDELLSLAVLKRGRKVVTGSTEGVLNIYSWGHLEDCSD--------RLPGHPESVSALV--KVDEDRLITASSDGLLRVVSIQPNRLVGVIGEHSDFP 151          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A7R9Y5L9_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y5L9_9VIRI)

HSP 1 Score: 103 bits (258), Expect = 2.400e-20
Identity = 70/195 (35.90%), Postives = 110/195 (56.41%), Query Frame = 0
Query:  132 ITAFRVLDES-----TFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL 321
            I+A   L+ S     TF +GDD G + ++D+R   S     + +  +   S     D+IS ++ V+  +K   L TSGDGTL  YDLR     + KL++  D+ +++LLS+ VL +    V+G+  G L+IY+   ++DS         DRF GHPE+V  + A   DED +I+AS DG++R++ V   KL+GV+
Sbjct:  180 ISALAALELSVDGGGTFASGDDEGEIKVWDSRVCAS-----SGSSSKPVHSFDAHEDFISDLTYVA--DKQMLLATSGDGTLSGYDLR-----RGKLEHRSDNQEDELLSVCVLKQGKKVVTGSTEGVLSIYSWGHLEDS--------TDRFPGHPESVAALRAL--DEDTLITASGDGVLRVVSVQPNKLLGVI 352          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A484DTI7_BRELC (ANAPC4_WD40 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTI7_BRELC)

HSP 1 Score: 99.0 bits (245), Expect = 5.420e-19
Identity = 68/200 (34.00%), Postives = 100/200 (50.00%), Query Frame = 0
Query:  132 ITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPIHS 327
            +     L ++ F++GDD G + ++DTR              R      E  DYIS  +  SA  +D  L TSGDG L AYDLR     K  L    D   ++LLS+AV+      V G+  G L I++     D  D        RF GHP++V  V+  + DED I++ SSDGI+R++ +   KL+GV+    D+P+ +
Sbjct:  104 VNRLHELSDNVFVSGDDQGCIKIWDTRQH------------RCLSEFKEHTDYISGFATTSA--QDHLLATSGDGRLSAYDLR-----KNALVGKSDELDDELLSIAVIKNGRKIVCGSQDGVLVIFSWGIWGDMSD--------RFPGHPDSVEAVL--KVDEDTILTGSSDGIVRVVQLHPNKLLGVIGDHEDFPVEN 274          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A3M6VF45_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 7.510e-17
Identity = 77/285 (27.02%), Postives = 120/285 (42.11%), Query Frame = 0
Query:  132 ITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPIHSEESENDSLDTLRKRKXXXXKRKEDRWPVEDMVKVRGLNVPVFALLGHGSGIQFCDGSGLIEESSAEQGDTERECKATELKKMDRD 412
            +     L  + F +GDD G + ++DTR              R      E  DYIS  +   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS+AV+      V G+  G L I++     D  D        RF GHP++V+ ++  + DED +++ SSDGI+R++ +   KL+G++    D+P+ + +   D                                  +   + H + + F D   L EE   E+GD   E +   L ++  D
Sbjct:  104 VNRLHELSANVFASGDDLGCIKIWDTRQH------------RCLAEFKEHTDYISGFATNPA--QDHLLATSGDGRLTAYDLR-----KNVLAGKSDELDDELLSVAVIKNGRKIVCGSQNGVLVIFSWDTWGDMSD--------RFPGHPDSVDALL--KVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENLKFSYDK--------------------------------KIIGSVSHTNKVHFWDVGYLFEEDDGEEGDAANENEEKSLARIPMD 327          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A448YVC2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVC2_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 8.930e-17
Identity = 76/216 (35.19%), Postives = 102/216 (47.22%), Query Frame = 0
Query:  123 DGEDGNPCTITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLE---QADYISAIS--PVSAFEK----DAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVLDYPIHSEE 329
            DGE G P   T            GDD GGL ++D R    GS G + +  R     LE   Q DYIS I   P S  +     +  L TS DG+L  YDLR+            D   ++LLSL VL      V GT TG L+I++     D  D        RF GHP +V  ++  + DE+ I++ SSDG+IR++ +   KL+GVL+  I   E
Sbjct:  184 DGEAGTPLLAT------------GDDNGGLRIWDERLC-GGSSGASFSSSRPKGCVLEWNEQQDYISGIEYYPHSNGKNHDGNNILLATSADGSLGVYDLRMNKGTVADTTRTSDHLDDELLSLCVLKSGRKIVCGTQTGALSIFSWGTWGDISD--------RFPGHPSSVETLL--KVDENTILTGSSDGLIRVVQIHPDKLLGVLNDDIEGHE 376          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A6G0RY91_9STRA (ANAPC4_WD40 domain-containing protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0RY91_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.320e-16
Identity = 66/206 (32.04%), Postives = 100/206 (48.54%), Query Frame = 0
Query:  132 ITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPIHSEESEND 333
            +     L  + F +GDD G + ++DTR              R      E  DYIS  +   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS+AV+      V G+  G L I++     D  D        RF GHPE+V  ++  + DED +++ SSDGI+R++ +   KL+G++    D+P+ + +  +D
Sbjct:  104 VNRLHELSANVFASGDDQGCVKIWDTRQH------------RCLSEFKEHTDYISGFATNPA--QDHLLATSGDGRLSAYDLR-----KNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSD--------RFPGHPESVEALL--KVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENMKFSHD 280          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A662WRV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRV0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.820e-16
Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = 0
Query:  132 ITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPIHSEESEND 333
            +     L  +   +GDD G + ++DTR              R      E  DYIS  +   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS++V+      V G+  G L I++     D  D        RF GHP++V  ++  + DED I++ SSDGI+R++ +   KL+G++    D+P+ + +  +D
Sbjct:    3 VNRLHELSANVIASGDDQGCIKIWDTRQH------------RCLSEFKEHTDYISGFATNPA--QDHLLATSGDGRLSAYDLR-----KNVLAGKSDELDDELLSVSVIKNGKKIVCGSQDGVLVIFSWGTWGDMSD--------RFPGHPDSVEAIL--KVDEDTILTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVETLKFSHD 179          
BLAST of Gcaud7309.t1 vs. uniprot
Match: A0A0P1A5F6_PLAHL (Transducin family protein wd-40 repeat family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5F6_PLAHL)

HSP 1 Score: 90.1 bits (222), Expect = 5.650e-16
Identity = 64/206 (31.07%), Postives = 101/206 (49.03%), Query Frame = 0
Query:  132 ITAFRVLDESTFLAGDDCGGLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFLVTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGTLTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPIHSEESEND 333
            +     L E+ F++GDD G + ++DTR              R      E +DYIS  +   +  +D  L TSGDG L AY+LR     K  L    D   ++LLS+ V+      V G+  G L I++     D  D        RF GHP++V  ++  + DED +++ SSDGI+R++ V   KL+G++    D P+ + +  +D
Sbjct:  104 VNRLHELSENVFVSGDDQGCIKIWDTRQH------------RCLAEFKEHSDYISGFATNPS--QDHLLATSGDGRLSAYNLR-----KNALVGKSDELDDELLSVTVIKNGRKVVCGSQDGVLVIFSWGTWGDMSD--------RFPGHPDSVETLL--KVDEDTVLTGSSDGIVRVVQVHPNKLLGLIGDHEDLPVENLKFSHD 280          
The following BLAST results are available for this feature:
BLAST of Gcaud7309.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX05_9FLOR3.820e-14558.54WD repeat-containing protein JIP5 n=1 Tax=Gracilar... [more]
A0A5J4XDF7_9CHLO7.190e-2128.47Uncharacterized protein (Fragment) n=2 Tax=Treboux... [more]
A0A7S3B5K8_9VIRI2.020e-2039.74Hypothetical protein (Fragment) n=2 Tax=Prasinoder... [more]
A0A7R9Y5L9_9VIRI2.400e-2035.90Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A484DTI7_BRELC5.420e-1934.00ANAPC4_WD40 domain-containing protein n=1 Tax=Brem... [more]
A0A3M6VF45_9STRA7.510e-1727.02Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A448YVC2_9STRA8.930e-1735.19Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6G0RY91_9STRA1.320e-1632.04ANAPC4_WD40 domain-containing protein n=23 Tax=Per... [more]
A0A662WRV0_9STRA3.820e-1631.07Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A0P1A5F6_PLAHL5.650e-1631.07Transducin family protein wd-40 repeat family prot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 220..259
e-value: 65.0
score: 5.6
coord: 271..311
e-value: 0.22
score: 20.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 35..335
e-value: 3.3E-20
score: 74.6
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 176..321
NoneNo IPR availablePANTHERPTHR19855:SF23WD REPEAT-CONTAINING PROTEIN JIP5coord: 176..321
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 31..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1012_length_15067_cov_4.899907contigNODE_1012_length_15067_cov_4.899907:12223..14394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7309.t1Gcaud7309.t1Gracilaria caudata M_176_S67 malemRNANODE_1012_length_15067_cov_4.899907 12223..14394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7309.t1 ID=Gcaud7309.t1|Name=Gcaud7309.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=510bp
MKESNSSRHTGANALLDSDTENTSVEAWYLGLKYAPICVAAHTSKPCLLS
GFSEGEIALNVFSSTCGSSGPELKQRELYDIESSCVQTTFLGSDSFVVGT
SEGELLTFDVSRTTSLGTKRLPDGEDGNPCTITAFRVLDESTFLAGDDCG
GLHLFDTRTSQSGSVGETNNIGRSTCSCLEQADYISAISPVSAFEKDAFL
VTSGDGTLCAYDLRLPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVSGT
LTGPLNIYNLRFMDDSFDPDSAAHVDRFYGHPEAVNVVMAWEEDEDVIIS
ASSDGIIRIIDVPSRKLVGVLDYPIHSEESENDSLDTLRKRKKTKKKRKE
DRWPVEDMVKVRGLNVPVFALLGHGSGIQFCDGSGLIEESSAEQGDTERE
CKATELKKMDRDNCDGEAQISGSQTHRPCQDNGKAARSVTKAEAVGVTTT
VGSITTGGEEGYNLESTIFDDQSMRIGLTIPKLWPIRMNERFLGTVRNPS
NDQGVHTPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf