Gcaud8485.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8485.t1
Unique NameGcaud8485.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length286
Homology
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BLAST of Gcaud8485.t1 vs. uniprot
Match: A0A2V3IQ89_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ89_9FLOR)

HSP 1 Score: 238 bits (607), Expect = 5.560e-71
Identity = 112/221 (50.68%), Postives = 158/221 (71.49%), Query Frame = 0 
Query:   60 QPDYFSNNTLEMLFKDNRVTARIDSAVLDGIMLSMSGVVTYNQATSHSNITDEADMAGKSGSSALILQAKLDGESFRLMWMKRSCACSSDARFVITSANEGDEVWVAGSTTGLDNGEREVLESGMALMRYNSSGTQLLLRQLGAAGEKYDWVGYTLNARNGKRNVTLVGSANEKRYEGMQSALVAEIANESGDILKSVRISEGENVVGETFWNAKSMNGTL 280
            QP+ FS N L  LF DNRVT RIDSA L G +L+ +GVV Y+  T H+NI+DEAD+AG SGSSA ++Q ++DGE+  L W KR+CAC+  +RF +TS N G++VW+AGSTTGL +G+  V ++GMALMRYNSSG QL+L + G AGEKY+W+G   N  + K  V L+ +++++R+EG++  L A++ NE+G  ++   ++E EN V E FW+A S    L
Sbjct:   12 QPEPFSENILSTLFTDNRVTVRIDSASLSGSVLTAAGVVKYSGITVHANISDEADVAGTSGSSAFVMQMEMDGETSTLRWSKRTCACADSSRFAVTSTNGGEDVWIAGSTTGLPDGQGGVTDAGMALMRYNSSGDQLMLERRGNAGEKYEWIGVVDNGESEKMEVGLLATSSKQRFEGLEEVLFAQVVNETGSTVRQTLVTEEENAVNEVFWSADSFGKNL 232
The following BLAST results are available for this feature:
BLAST of Gcaud8485.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ89_9FLOR5.560e-7150.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..285
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1141_length_13362_cov_4.300354contigNODE_1141_length_13362_cov_4.300354:5173..6122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8485.t1Gcaud8485.t1Gracilaria caudata M_176_S67 malemRNANODE_1141_length_13362_cov_4.300354 5173..6122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8485.t1 ID=Gcaud8485.t1|Name=Gcaud8485.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=286bp
MCVTRLWSIVVLIAVIHSRLASGRALMPDIRNLLNGHELRTLREGHLDVT
ERDTGSKAKQPDYFSNNTLEMLFKDNRVTARIDSAVLDGIMLSMSGVVTY
NQATSHSNITDEADMAGKSGSSALILQAKLDGESFRLMWMKRSCACSSDA
RFVITSANEGDEVWVAGSTTGLDNGEREVLESGMALMRYNSSGTQLLLRQ
LGAAGEKYDWVGYTLNARNGKRNVTLVGSANEKRYEGMQSALVAEIANES
GDILKSVRISEGENVVGETFWNAKSMNGTLRRTRV*
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