Gcaud7680.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7680.t1
Unique NameGcaud7680.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length160
Homology
BLAST of Gcaud7680.t1 vs. uniprot
Match: A0A2V3IK50_9FLOR (60S ribosomal protein L21-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK50_9FLOR)

HSP 1 Score: 277 bits (708), Expect = 1.150e-93
Identity = 137/159 (86.16%), Postives = 148/159 (93.08%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFVV 159
            MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTF VGDFVDIHINPAVMKGMPHKFY GRTGR+FNVSRTAVGVEVSKQ+GNQILMKRFHIR EH+ KSRC++DF++R L+RE +AR A +RGEKYV+QKRTPVLP  AHVVDA TMELVEPIPYEFVV
Sbjct:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFHVGDFVDIHINPAVMKGMPHKFYQGRTGRIFNVSRTAVGVEVSKQVGNQILMKRFHIRIEHINKSRCSEDFRKRVLQREQDARGARERGEKYVVQKRTPVLPPNAHVVDATTMELVEPIPYEFVV 159          
BLAST of Gcaud7680.t1 vs. uniprot
Match: R7QRP4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRP4_CHOCR)

HSP 1 Score: 254 bits (648), Expect = 1.610e-84
Identity = 123/159 (77.36%), Postives = 144/159 (90.57%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFVV 159
            MVRSNGKRANTR LF+K+FRKKG EH+STYLQ FK+GDFVDIHINPAVMKGMPHKFY GR+GRVFNVSRT+VGVEVSK +GN+I+MKRFHIRTEHV+KSRCN+D+ +R   REMEAREAH +G+KY + KRTP LP+ AH+VDA+ MELV+PIPYEF+V
Sbjct:    1 MVRSNGKRANTRDLFRKAFRKKGNEHLSTYLQIFKIGDFVDIHINPAVMKGMPHKFYQGRSGRVFNVSRTSVGVEVSKTVGNRIMMKRFHIRTEHVQKSRCNEDYLKRCKGREMEAREAHSKGDKYNVIKRTPALPSEAHIVDASKMELVDPIPYEFIV 159          
BLAST of Gcaud7680.t1 vs. uniprot
Match: Q7XYA8_GRIJA (60S ribosome protein L21 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA8_GRIJA)

HSP 1 Score: 242 bits (618), Expect = 6.000e-80
Identity = 120/159 (75.47%), Postives = 136/159 (85.53%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFVV 159
            MVRSNGKRANTR LFKK+FRK G EH STYLQ FK+G++VDIHINP +MKGMPHKFYHGRTGRVFNVSRTAVGVEVSK++ ++I+ KRFHIR EHV+KS+CN DF  R   RE+EA+EAHKRGEKY + KRTP LP  AH+V A  MELVEPIPYEFVV
Sbjct:    1 MVRSNGKRANTRDLFKKAFRKSGNEHTSTYLQVFKIGEYVDIHINPTIMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKRVRHRIINKRFHIRIEHVRKSQCNKDFLDRCKLREIEAQEAHKRGEKYTVVKRTPALPRDAHLVTAGEMELVEPIPYEFVV 159          
BLAST of Gcaud7680.t1 vs. uniprot
Match: A0A6T6CI30_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CI30_9RHOD)

HSP 1 Score: 199 bits (505), Expect = 9.590e-63
Identity = 96/159 (60.38%), Postives = 124/159 (77.99%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFVV 159
            MVRS GKR+NTR LFK+ FRK G   +STYL  FK+G++VDI  N A+ +GMP K+YHGRTG++FNVSR AVGVEV+KQ+GN+I+ KRFH+R EHVKKSRC++DFK+R  +R+   REA ++GEK +  KR PV P  AHVV  + M  +EP+PY+FVV
Sbjct:    1 MVRSGGKRSNTRDLFKRPFRKNGMPSISTYLTNFKIGEYVDIVANAAIQQGMPFKYYHGRTGKIFNVSRAAVGVEVTKQVGNRIIPKRFHVRIEHVKKSRCSEDFKKRVRERDAMRREAREKGEKLISDKRKPVTPPEAHVVSGSNMVYLEPLPYKFVV 159          
BLAST of Gcaud7680.t1 vs. uniprot
Match: T2MFP5_HYDVU (60S ribosomal protein L21 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MFP5_HYDVU)

HSP 1 Score: 171 bits (433), Expect = 8.740e-52
Identity = 90/161 (55.90%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATME--LVEPIPYEFVV 159
            M    GKR  TR+LF K FRK G EH+STYL+T+KVGD VD+  N A+ KGMP+KFYHG+TGRVFNV+++AVGV V+KQLGN+I+ K+ ++R EHVK S+C DDF +R  + E++ R A   G K V  +R PVLP  AH V +      LVEPIPYEF++
Sbjct:    1 MTNPKGKRRGTRYLFSKKFRKHGVEHLSTYLKTYKVGDIVDVKGNGAIQKGMPYKFYHGKTGRVFNVTKSAVGVVVNKQLGNRIIPKKINVRIEHVKHSKCRDDFLRRVKENEVKKRAAKATGAK-VDCRRQPVLPREAHFVSSKNNAPILVEPIPYEFII 160          
BLAST of Gcaud7680.t1 vs. uniprot
Match: D8RES0_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RES0_SELML)

HSP 1 Score: 166 bits (421), Expect = 5.810e-50
Identity = 86/158 (54.43%), Postives = 113/158 (71.52%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFV 158
            M   +G+RA TR LF + FRKKGP  +S YL+TF+VGD+VD+ +N A+ KGMPHKFYHGRTG V+NV++ AVGVE++KQ+GN+I+ KR H+R EHVK SRC +DF    LKR   + EA K G K  + KR P  P    +V+ AT+E V P+PY+ V
Sbjct:    1 MPAGHGQRARTRDLFAREFRKKGPIPLSVYLRTFRVGDYVDVKVNGAIHKGMPHKFYHGRTGVVWNVTKRAVGVEMNKQVGNRIIKKRLHVRIEHVKPSRCREDF----LKRIKSSAEARKSGNKTCL-KRQPAGPKPGFIVEGATLETVTPVPYDVV 153          
BLAST of Gcaud7680.t1 vs. uniprot
Match: A0A7J7KUK8_9MAGN (Uncharacterized protein n=28 Tax=Magnoliopsida TaxID=3398 RepID=A0A7J7KUK8_9MAGN)

HSP 1 Score: 166 bits (421), Expect = 6.580e-50
Identity = 82/158 (51.90%), Postives = 117/158 (74.05%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFV 158
            M   +G R+ TR LF ++FRKKG   +STYL+T+++GD+VD+ +N AV KGMPHKFYHGRTG+V+NV++ A+GVE++KQ+GN+I+ KR H+R EHV+ SRC ++FK R ++ +    EA  RGEK +  KR P+ P    +V+ AT+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDLFSRAFRKKGYIPLSTYLKTYRIGDYVDVKVNGAVHKGMPHKFYHGRTGKVWNVTKRAIGVEINKQVGNRIIRKRIHVRIEHVQPSRCEEEFKHRKIQNDKLKGEAKARGEK-ISTKRQPLGPKPGFMVEGATLETVTPIPYDVV 157          
BLAST of Gcaud7680.t1 vs. uniprot
Match: A0A5B6V7X1_9ROSI (60S ribosomal protein L21-1 n=18 Tax=Gossypium TaxID=3633 RepID=A0A5B6V7X1_9ROSI)

HSP 1 Score: 166 bits (421), Expect = 1.300e-49
Identity = 85/156 (54.49%), Postives = 113/156 (72.44%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYE 156
            M   +G R+ TR LF + FRKKG   +STYL+T+K+GD+VD+ +N AV KGMPHKFYHGRTGRV+NV++ A+GVEV+KQ+GN+I+ KR H+R EHV+ SRC ++FK R LK +    EA  +GE  +  KR P  P    +VD AT+E V PIPY+
Sbjct:   30 MPAGHGLRSRTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCAEEFKLRKLKNDQLKAEAKAKGE-VISTKRQPEGPRPGFMVDGATLETVTPIPYD 184          
BLAST of Gcaud7680.t1 vs. uniprot
Match: UPI001CC6AC8A (60S ribosomal protein L21-1-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC6AC8A)

HSP 1 Score: 164 bits (415), Expect = 5.360e-49
Identity = 85/158 (53.80%), Postives = 113/158 (71.52%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFV 158
            M   +G R+ TR LF + FRKKG   ++TYL+TF+VGDFVDI +N A+ KGMPHKFYHGRTG+V+NV++ A+GVEV+KQ+ N+IL KR H+R EHV  SRCN++ +QR +K +    EA  RGE  +  KR P  P    +V+ AT+E V PIPY+ V
Sbjct:    1 MPAGHGVRSRTRDLFARPFRKKGYIPLTTYLRTFRVGDFVDIKVNGAIHKGMPHKFYHGRTGKVWNVTKRAIGVEVNKQVRNKILKKRIHVRVEHVLPSRCNEEIRQRKIKNDQLKAEAKARGE-VISTKRQPEGPKPGFMVEGATLETVTPIPYDVV 157          
BLAST of Gcaud7680.t1 vs. uniprot
Match: A0A4D8Z9D7_SALSN (Large subunit ribosomal protein L21e n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Z9D7_SALSN)

HSP 1 Score: 164 bits (414), Expect = 7.600e-49
Identity = 81/158 (51.27%), Postives = 115/158 (72.78%), Query Frame = 0
Query:    1 MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMKGMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSRCNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELVEPIPYEFV 158
            M   +G R+ TR  F ++FRKKGP H+STYL+T+K+GD+VD+ +N ++ KGMPHKFYHGRTGRV+NV++ AVGVEV+KQ+GN+I+ KR H+R EHV++SRC+++   R  K +    +A ++G K +  KR P  P    +V  AT+E V PIPY+ V
Sbjct:    1 MPAGHGLRSRTRDSFSRAFRKKGPTHLSTYLRTYKIGDYVDVKVNGSIHKGMPHKFYHGRTGRVWNVTKRAVGVEVNKQVGNRIIRKRIHVRIEHVQQSRCHEEVMLRIKKNDQLKADAKEQG-KIISTKRQPEGPKPGFMVGGATLETVTPIPYDVV 157          
The following BLAST results are available for this feature:
BLAST of Gcaud7680.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IK50_9FLOR1.150e-9386.1660S ribosomal protein L21-2 n=1 Tax=Gracilariopsis... [more]
R7QRP4_CHOCR1.610e-8477.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
Q7XYA8_GRIJA6.000e-8075.4760S ribosome protein L21 n=1 Tax=Griffithsia japon... [more]
A0A6T6CI30_9RHOD9.590e-6360.38Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
T2MFP5_HYDVU8.740e-5255.9060S ribosomal protein L21 n=1 Tax=Hydra vulgaris T... [more]
D8RES0_SELML5.810e-5054.43Uncharacterized protein n=1 Tax=Selaginella moelle... [more]
A0A7J7KUK8_9MAGN6.580e-5051.90Uncharacterized protein n=28 Tax=Magnoliopsida Tax... [more]
A0A5B6V7X1_9ROSI1.300e-4954.4960S ribosomal protein L21-1 n=18 Tax=Gossypium Tax... [more]
UPI001CC6AC8A5.360e-4953.8060S ribosomal protein L21-1-like n=1 Tax=Telopea s... [more]
A0A4D8Z9D7_SALSN7.600e-4951.27Large subunit ribosomal protein L21e n=1 Tax=Salvi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 1..101
e-value: 2.2E-40
score: 136.6
IPR001147Ribosomal protein L21ePANTHERPTHR2098160S RIBOSOMAL PROTEIN L21coord: 1..158
NoneNo IPR availableGENE3D6.10.250.3260coord: 99..159
e-value: 4.2E-13
score: 51.3
NoneNo IPR availablePANTHERPTHR20981:SF6RIBOSOMAL PROTEIN L21coord: 1..158
IPR036948Ribosomal protein L21 superfamilyGENE3D2.30.30.70Ribosomal protein L21coord: 1..98
e-value: 7.6E-39
score: 133.7
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_500_length_23599_cov_4.429981contigNODE_500_length_23599_cov_4.429981:22067..22546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7680.t1Gcaud7680.t1Gracilaria caudata M_176_S67 malemRNANODE_500_length_23599_cov_4.429981 22067..22546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7680.t1 ID=Gcaud7680.t1|Name=Gcaud7680.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=160bp
MVRSNGKRANTRHLFKKSFRKKGPEHVSTYLQTFKVGDFVDIHINPAVMK
GMPHKFYHGRTGRVFNVSRTAVGVEVSKQLGNQILMKRFHIRTEHVKKSR
CNDDFKQRALKREMEAREAHKRGEKYVIQKRTPVLPTRAHVVDAATMELV
EPIPYEFVV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001147Ribosomal_L21e
IPR036948Ribosomal_L21_sf
IPR018259Ribosomal_L21e_CS
IPR008991Translation_prot_SH3-like_sf