Gcaud251.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud251.t1
Unique NameGcaud251.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length292
Homology
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BLAST of Gcaud251.t1 vs. uniprot
Match: A0A2V3ILY7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILY7_9FLOR)

HSP 1 Score: 277 bits (709), Expect = 9.530e-90
Identity = 183/294 (62.24%), Postives = 200/294 (68.03%), Query Frame = 0 
Query:    1 MSADATPSPQSPECSVSPRSAASAVSVDAIFARAERVFERRVDQLLQAKRQKAAFARAPFNARKAKRDARTVAGREKLDALVRRLADLATVQQMLLGEKATTLVTHVLDGAAAAALGVAALHAQPAPEAQPPA-APCQSPAVKEEKEFIETSSCSDD-SVGAVAKDDMHELVDGVNQLRMYHATESVVNFVLDCDDDHDNVPLRSQAQDVAP-SMPVSRDVSKLRRMNSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARARPALGHLRAQAQSLPLSVYRSHPHCDMPKY 291
            MSADA P  QSP  S  P + ASAVSV  IFARAERVFERRVDQLLQAKR+KAA AR PFNARKAKRDARTVAGREKLDALVRRLADLAT+QQ LLGEK TTLV+ +LDGA AAALGVAAL A P P+ QP    P Q P+VKEEK+ IETSSCSDD SVGAVAKD+MHELVDGVNQ RMY ATESVVNFVLDCDDD  + PL SQ     P + P + D + LRRMNSAP                              AR+R  + H     Q     +Y+SH  CD   Y
Sbjct:    1 MSADAAP--QSPLPSP-PSTPASAVSVQDIFARAERVFERRVDQLLQAKRRKAAVARLPFNARKAKRDARTVAGREKLDALVRRLADLATIQQALLGEKGTTLVSSILDGATAAALGVAALTALPVPDEQPEEHQPTQQPSVKEEKDCIETSSCSDDCSVGAVAKDEMHELVDGVNQQRMYRATESVVNFVLDCDDDPVSQPLPSQPSREPPMAPPANYDNANLRRMNSAPVCHCQLPDCHCSRNYVNAATSCLSGV----ARSRYDVNHYHTHTQIDSALMYKSHQPCDYAHY 287
The following BLAST results are available for this feature:
BLAST of Gcaud251.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILY7_9FLOR9.530e-9062.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_4928_length_1888_cov_3.184752contigNODE_4928_length_1888_cov_3.184752:96..971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud251.t1Gcaud251.t1Gracilaria caudata M_176_S67 malemRNANODE_4928_length_1888_cov_3.184752 96..971 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud251.t1 ID=Gcaud251.t1|Name=Gcaud251.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=292bp
MSADATPSPQSPECSVSPRSAASAVSVDAIFARAERVFERRVDQLLQAKR
QKAAFARAPFNARKAKRDARTVAGREKLDALVRRLADLATVQQMLLGEKA
TTLVTHVLDGAAAAALGVAALHAQPAPEAQPPAAPCQSPAVKEEKEFIET
SSCSDDSVGAVAKDDMHELVDGVNQLRMYHATESVVNFVLDCDDDHDNVP
LRSQAQDVAPSMPVSRDVSKLRRMNSAPAPAPAPECHCMRCDCVCNLNYH
SNSAMSAGARARPALGHLRAQAQSLPLSVYRSHPHCDMPKY*
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