Gcaud831.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud831.t1
Unique NameGcaud831.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length129
Homology
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BLAST of Gcaud831.t1 vs. uniprot
Match: A0A2V3J4G5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4G5_9FLOR)

HSP 1 Score: 159 bits (401), Expect = 7.350e-48
Identity = 88/129 (68.22%), Postives = 109/129 (84.50%), Query Frame = 0 
Query:    1 MLALRS-SLIRAAALVAPRRSLAISATVKVAPDTSAENFPAPSHVSLSSEAADLAQQLNAFYSDPESVVSLSDETRDALQAEVMKRVLSVPEAEVSTAWAEQNLQIPSEIRLGDNPLFESAQKMRIGSK 128
            MLALR+ SL RAA   AP R+LAI+ATVK A DTSA  FPAPSHVS+++EAADLA+QLN FYS+P+SV+++ D+ R++L+AEVMK+V +VP+A +S AWA QNLQIPSEIRLGDNPLFES QK+R  SK
Sbjct:    1 MLALRAASLARAATSAAPIRALAITATVKDASDTSAMKFPAPSHVSIAAEAADLARQLNEFYSNPDSVIAIPDDIRESLRAEVMKKVGAVPDANISAAWANQNLQIPSEIRLGDNPLFESHQKLRDSSK 129
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BLAST of Gcaud831.t1 vs. uniprot
Match: R7QGD0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGD0_CHOCR)

HSP 1 Score: 125 bits (315), Expect = 8.470e-35
Identity = 64/122 (52.46%), Postives = 89/122 (72.95%), Query Frame = 0 
Query:    6 SSLIRAAALVAPRRSLAISATVKVAPDTSAENFPAPSHVSLSSEAADLAQQLNAFYSDPESVVSLSDETRDALQAEVMKRVLSVPEAEVSTAWAEQNLQIPSEIRLGDNPLFESAQKMRIGS 127
            SS +R AA   PRR LAI++TV  A DTS  +FPAPSHVSLSS+AA+LA QL  FYSDP+SV+ + +ETR  + A++ KR+ S+P+  ++  W + ++ +PSE+RLGDNP FE+ +K R  S
Sbjct:    7 SSSLRRAAAAVPRRHLAIASTVGQATDTSKMDFPAPSHVSLSSQAAELASQLTNFYSDPDSVIKIPEETRKVIHADISKRIRSIPDTPLTEDWTDAHITVPSEVRLGDNPYFEAFKKAREAS 128
The following BLAST results are available for this feature:
BLAST of Gcaud831.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4G5_9FLOR7.350e-4868.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGD0_CHOCR8.470e-3552.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_490_length_23884_cov_4.522254contigNODE_490_length_23884_cov_4.522254:1756..2379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud831.t1Gcaud831.t1Gracilaria caudata M_176_S67 malemRNANODE_490_length_23884_cov_4.522254 1756..2379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud831.t1 ID=Gcaud831.t1|Name=Gcaud831.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=129bp
MLALRSSLIRAAALVAPRRSLAISATVKVAPDTSAENFPAPSHVSLSSEA
ADLAQQLNAFYSDPESVVSLSDETRDALQAEVMKRVLSVPEAEVSTAWAE
QNLQIPSEIRLGDNPLFESAQKMRIGSK*
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