Gcaud2344.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2344.t1
Unique NameGcaud2344.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length115
Homology
BLAST of Gcaud2344.t1 vs. uniprot
Match: A0A2V3J1D5_9FLOR (LYR motif-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1D5_9FLOR)

HSP 1 Score: 177 bits (448), Expect = 1.940e-55
Identity = 85/114 (74.56%), Postives = 100/114 (87.72%), Query Frame = 0
Query:    1 MKYRRQVLSLYRKALRIAKSWEEPSERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQSQRGNRKATREKPEY 114
            MKYR+QVLSLYR+ALR++++W EPSERSYI NEA+ L+  N+ I S D+IAEKVQEFEAR+TTG+HY+IPYPRPTNV PGATGKDPEVITPVYL+SY+Q Q  NRK  REKPEY
Sbjct:    1 MKYRKQVLSLYRRALRLSRTWAEPSERSYIANEARTLVRSNRNIQSLDVIAEKVQEFEARLTTGVHYQIPYPRPTNVVPGATGKDPEVITPVYLNSYQQVQNMNRKTAREKPEY 114          
BLAST of Gcaud2344.t1 vs. uniprot
Match: M2XZ60_GALSU (LYR motif-containing protein 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZ60_GALSU)

HSP 1 Score: 100 bits (250), Expect = 6.660e-25
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPSERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSY 97
            +RQVL LYR  LR+AK+W+EP E  YI  EA  L  +NK I  ++ I EK+ E   R+  G+HYKIPYPRP +V PGATGK  ++I P Y+ SY
Sbjct:   12 KRQVLRLYRDILRVAKNWKEPEEAQYIREEADRLFHQNKTITGKEEIEEKLFEGRTRLELGIHYKIPYPRPYHVVPGATGKTRDMIKPAYMASY 105          
BLAST of Gcaud2344.t1 vs. uniprot
Match: A0A7K4XJK4_REGSA (LYRM1 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K4XJK4_REGSA)

HSP 1 Score: 82.0 bits (201), Expect = 7.960e-18
Identity = 49/115 (42.61%), Postives = 66/115 (57.39%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAP-------GATGKDPE----VITPVYLDSYKQ 99
            R++VL LYRK LRIAKSW+  S        E+ YI NEA+ L  KNK +    +I + ++E EARI  GLHY IPYPRP ++ P       G T +  E    +  P+YL S+ +
Sbjct:    6 RQEVLGLYRKVLRIAKSWQSTSGQVEETMREKEYIRNEARTLFRKNKSVTDPKLIKQCIEECEARIEIGLHYNIPYPRPIHLPPMSLAHKQGRTLRQQEKLRKISKPIYLKSHDE 120          
BLAST of Gcaud2344.t1 vs. uniprot
Match: A0A670K4B9_PODMU (Complex1_LYR_dom domain-containing protein n=4 Tax=Lacertinae TaxID=162266 RepID=A0A670K4B9_PODMU)

HSP 1 Score: 81.6 bits (200), Expect = 1.130e-17
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAP-------GATGKDPEVIT----PVYLDSYKQ 99
            R++VL LYRK  RIA+ W+  S        E+ YI+NEAK L LKNK +    +I + + E  ARI  GLHY IPYPRPT++ P       G T +  E +     P+YL S+ +
Sbjct:    6 RQEVLGLYRKIFRIARKWQSASGQMEETIKEKQYIINEAKTLFLKNKNLTDPKLIKQCIDECTARIEIGLHYHIPYPRPTHLPPMGLAQQHGRTFRHQEKLRKLSKPIYLKSHDE 120          
BLAST of Gcaud2344.t1 vs. uniprot
Match: A0A2I2Y204_GORGO (Complex1_LYR_dom domain-containing protein n=5 Tax=Catarrhini TaxID=9526 RepID=A0A2I2Y204_GORGO)

HSP 1 Score: 79.0 bits (193), Expect = 8.680e-17
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAP 79
            R++VL LYR   R+A+ W+  S        E+ YI+NEA+ L  KNK +   D+I + + E  ARI TGLHYKIPYPRP +V P
Sbjct:    6 RQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCIDECTARIETGLHYKIPYPRPVSVTP 89          
BLAST of Gcaud2344.t1 vs. uniprot
Match: UPI0007402EC9 (LYR motif-containing protein 1 isoform X1 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI0007402EC9)

HSP 1 Score: 79.0 bits (193), Expect = 1.320e-16
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAP-----------GATGKDPEVITPVYLDSYKQS 100
            R++VLSLYR+ LRIA+SW+  S        ERSYI  EA+ L  +NK+I   + I + ++E  ARI  GLHY+IPYPRPT + P            A  +  +   P+YL S+ ++
Sbjct:    7 RQEVLSLYRRVLRIARSWQAQSGLSQDTSTERSYITQEARTLFRQNKQITDGESIKKCIEECHARIEMGLHYRIPYPRPTYLPPMGLATQRGRRLRAQERRRKQAQPIYLQSHDET 122          
BLAST of Gcaud2344.t1 vs. uniprot
Match: UPI0019656E2A (LYR motif containing protein 1 isoform X1 n=1 Tax=Polypterus senegalus TaxID=55291 RepID=UPI0019656E2A)

HSP 1 Score: 78.6 bits (192), Expect = 1.810e-16
Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDP-----------EVITPVYLDSYKQS 100
            R++VL LYRK LRIA+ W+  S        ER YI  EA+NL  +N+ I    +I   ++E  ARI  GLHYKIPYPRPT++ P                  +   P+YL S+ +S
Sbjct:    6 RQEVLGLYRKVLRIARRWQSQSGLDKDSDVERKYICQEARNLFKQNRNITDPQLIKNCIEECNARIEIGLHYKIPYPRPTHLPPMGLATQSGRRLHRQVELRKRAKPIYLQSHHES 121          
BLAST of Gcaud2344.t1 vs. uniprot
Match: W5MMR8_LEPOC (LYR motif containing 1 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MMR8_LEPOC)

HSP 1 Score: 79.0 bits (193), Expect = 3.020e-16
Identity = 47/116 (40.52%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAP-----------GATGKDPEVITPVYLDSYKQS 100
            R++VLSLYR+ LRIA+SW+  S        ERSYI  EA+ L  +NK+I   + I + ++E  ARI  GLHY+IPYPRPT + P            A  +  +   P+YL S+ ++
Sbjct:   41 RQEVLSLYRRVLRIARSWQAQSGLSQDTSTERSYITQEARTLFRQNKQITDGESIKKCIEECHARIEMGLHYRIPYPRPTYLPPMGLATQRGRRLRAQERRRKQAQPIYLQSHDET 156          
BLAST of Gcaud2344.t1 vs. uniprot
Match: A0A444ST16_ARMVU (LYR motif-containing protein 1 n=1 Tax=Armadillidium vulgare TaxID=13347 RepID=A0A444ST16_ARMVU)

HSP 1 Score: 77.4 bits (189), Expect = 4.190e-16
Identity = 45/107 (42.06%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    4 RRQVLSLYRKALRIAKSWE--EPS----ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVIT--------PVYLDS 96
            RR+VLSLY++ LR++ +WE  EPS    ER YI  EA+ L  KNK ++ E  I + +   EAR+  G+HY++PYPRP N+ P    K   ++         PVYL S
Sbjct:    6 RREVLSLYKRILRLSLTWEAKEPSKTKEERIYIRTEARTLFRKNKDVSDEREIRDMLTGAEARVEMGIHYRLPYPRPVNLPPNVLAKQKGIVNIRRLEKSRPVYLKS 112          
BLAST of Gcaud2344.t1 vs. uniprot
Match: A0A8B7YQH3_ACAPL (LYR motif-containing protein 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YQH3_ACAPL)

HSP 1 Score: 77.4 bits (189), Expect = 4.760e-16
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 0
Query:    1 MKYRRQVLSLYRKALRIAKSWEEPS--------ERSYIVNEAKNLILKNKRINSEDIIAEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEV-------------ITPVYLDSYKQ 99
            M  R++VLSLYRK LR AK+W+  +        ER YI +EA+ L  KNK++   ++I   +QE EAR+   LHY+ PYPRP N+ P   G  P V               PVYL S+ +
Sbjct:    1 MALRQEVLSLYRKLLRAAKTWQASTKLMKDTREERQYIQDEARTLFRKNKQVTDPEMIRIYIQEAEARLAMALHYQSPYPRPVNIPP--MGLTPSVSRGKKAQDRLRQRAKPVYLQSHDE 118          
The following BLAST results are available for this feature:
BLAST of Gcaud2344.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1D5_9FLOR1.940e-5574.56LYR motif-containing protein 1 n=1 Tax=Gracilariop... [more]
M2XZ60_GALSU6.660e-2553.19LYR motif-containing protein 1 n=1 Tax=Galdieria s... [more]
A0A7K4XJK4_REGSA7.960e-1842.61LYRM1 protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
A0A670K4B9_PODMU1.130e-1741.74Complex1_LYR_dom domain-containing protein n=4 Tax... [more]
A0A2I2Y204_GORGO8.680e-1747.62Complex1_LYR_dom domain-containing protein n=5 Tax... [more]
UPI0007402EC91.320e-1640.52LYR motif-containing protein 1 isoform X1 n=1 Tax=... [more]
UPI0019656E2A1.810e-1639.66LYR motif containing protein 1 isoform X1 n=1 Tax=... [more]
W5MMR8_LEPOC3.020e-1640.52LYR motif containing 1 n=2 Tax=Lepisosteus oculatu... [more]
A0A444ST16_ARMVU4.190e-1642.06LYR motif-containing protein 1 n=1 Tax=Armadillidi... [more]
A0A8B7YQH3_ACAPL4.760e-1640.00LYR motif-containing protein 1-like n=1 Tax=Acanth... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR protein domainPFAMPF05347Complex1_LYRcoord: 5..56
e-value: 5.0E-9
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..114
IPR040330LYR motif-containing protein 1PANTHERPTHR14273LYR MOTIF-CONTAINING PROTEIN 1coord: 2..87
IPR045294LYRM1, LYR domainCDDcd20261Complex1_LYR_LYRM1coord: 6..73
e-value: 8.44778E-24
score: 84.6004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:28621..29094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2344.t1Gcaud2344.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 28621..29094 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2344.t1 ID=Gcaud2344.t1|Name=Gcaud2344.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=115bp
MKYRRQVLSLYRKALRIAKSWEEPSERSYIVNEAKNLILKNKRINSEDII
AEKVQEFEARITTGLHYKIPYPRPTNVAPGATGKDPEVITPVYLDSYKQS
QRGNRKATREKPEY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR_dom
IPR040330LYRM1
IPR045294Complex1_LYR_LYRM1