Gcaud2361.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2361.t1
Unique NameGcaud2361.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length141
Homology
BLAST of Gcaud2361.t1 vs. uniprot
Match: A0A2V3J075_9FLOR (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J075_9FLOR)

HSP 1 Score: 236 bits (602), Expect = 1.770e-77
Identity = 104/140 (74.29%), Postives = 127/140 (90.71%), Query Frame = 0
Query:    1 MDPSSVGTGYALLETFKGVVIGPTVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQYEDYVYTSIDDYFLDGP 140
            +DPS+VGTG+ALL +FKG+VIGPTV EITAA AGGTVGVMGTII LE++R ++K RKQCPYCRG+GKLPCA+CYT+G++PS  ++ +Q+ C+ C+E+GFLQCNHCDGDGRLIP AYERAIRAQYEDYVYT+IDDY+ DGP
Sbjct:   42 IDPSTVGTGFALLNSFKGIVIGPTVTEITAAIAGGTVGVMGTIITLELQRQRVKHRKQCPYCRGTGKLPCASCYTIGAVPSRTALTAQEVCTCCNERGFLQCNHCDGDGRLIPLAYERAIRAQYEDYVYTAIDDYYQDGP 181          
BLAST of Gcaud2361.t1 vs. uniprot
Match: R7QE93_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE93_CHOCR)

HSP 1 Score: 231 bits (590), Expect = 6.970e-75
Identity = 102/140 (72.86%), Postives = 121/140 (86.43%), Query Frame = 0
Query:    1 MDPSSVGTGYALLETFKGVVIGPTVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQYEDYVYTSIDDYFLDGP 140
            +DP++VGTGYA L   KGVVIGPT+NEITAA AGGTVGVMGTII LEVRR ++KERKQCPYCRG+GKLPCA CYTVG++P   ++++Q  C+ C+E+GFL+CNHC GDGRLIPW YERAI AQYEDY YT+IDDY+ DGP
Sbjct:   96 LDPANVGTGYAFLNGLKGVVIGPTINEITAAIAGGTVGVMGTIITLEVRRQQVKERKQCPYCRGNGKLPCATCYTVGAVPCGDALSAQTGCAVCNERGFLECNHCQGDGRLIPWVYERAISAQYEDYTYTAIDDYYQDGP 235          
BLAST of Gcaud2361.t1 vs. uniprot
Match: M2Y0D2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y0D2_GALSU)

HSP 1 Score: 121 bits (304), Expect = 1.560e-32
Identity = 56/106 (52.83%), Postives = 73/106 (68.87%), Query Frame = 0
Query:   21 IGPTVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQYED 126
            I PTVNE+T+A AGGTVGVMGT++ LEV R +I+E +QCPYCRG  KLPC  CY +G +P  + +  +  C  C  +G + C HCDG GR +P  YERA+  Q E+
Sbjct:   46 IPPTVNEVTSALAGGTVGVMGTLLVLEVIRQRIEEMRQCPYCRGLRKLPCGLCYGMGFIPDVSCLYCKSDCENCGGEGSVLCCHCDGSGRYLPVEYERALFWQGEE 151          
BLAST of Gcaud2361.t1 vs. uniprot
Match: A0A5J4ZBM1_PORPP (Protein ORANGE-LIKE, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4ZBM1_PORPP)

HSP 1 Score: 122 bits (307), Expect = 4.970e-31
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 0
Query:   23 PTVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQY-EDYVYTSIDDYFLDGP 140
            PT+ +I +AFAGGTVGVMGT+IALE  +    ER+QC YCRG+GKL C +C  +  +P A +   Q+ C  CS +G ++C HC+G GRL+P  YERA+RAQY ED+   + D  F D P
Sbjct:  233 PTIMQIGSAFAGGTVGVMGTLIALEWAKIDTLERQQCSYCRGTGKLICGSCCGLRVMPDAQT--GQRDCDNCSGQGGVECMHCEGSGRLLPIRYERALRAQYREDWARGNFDGDFFDNP 349          
BLAST of Gcaud2361.t1 vs. uniprot
Match: A0A7S0G9E2_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G9E2_9RHOD)

HSP 1 Score: 107 bits (267), Expect = 3.030e-27
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 0
Query:   14 ETFKGVVIGPTVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQ 123
            +  K  ++ P  N+I +AFAGGTVGVM +++    R  ++KE++QC YCRG+G LPC  CYT+G++P+      +  C  C  +G++ C HC G GR  P  + +  R+Q
Sbjct:   26 QLMKDTLLTPQTNQIMSAFAGGTVGVMSSVLIYGKRVQELKEKQQCCYCRGAGTLPCGQCYTIGAVPTPGMPLGKSNCEACDRRGYITCEHCRGTGRADPLDFSKKTRSQ 135          
BLAST of Gcaud2361.t1 vs. uniprot
Match: M1UXZ1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UXZ1_CYAM1)

HSP 1 Score: 104 bits (259), Expect = 2.240e-25
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0
Query:   25 VNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQYE 125
            + E+ +AFAGG++GV+GT++ LE+ + + +ER QCPYC G GKL C  C  +G+LP+  S      C  C   G++ CNHC+G GRL     ERA    YE
Sbjct:   84 IQELASAFAGGSIGVLGTLLTLELAQTRARERMQCPYCSGRGKLVCGQCLALGTLPNRKSPDGTVPCRLCGRSGYVPCNHCEGTGRLFQEEVERAALQTYE 184          
BLAST of Gcaud2361.t1 vs. uniprot
Match: A0A7S1TK16_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK16_9RHOD)

HSP 1 Score: 91.3 bits (225), Expect = 8.360e-21
Identity = 53/121 (43.80%), Postives = 65/121 (53.72%), Query Frame = 0
Query:   24 TVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSL----PSAASVASQKT---------------CSTCSEKGFLQCNHCDGDGRLIPWAYERAIRAQYE 125
            TV +I AAFAGGTVGVMG++IA E+R+ + KE KQCPYC G+G+L C  C   G L      A + A  KT               CS C     ++C HC GDGR+IP   E A     E
Sbjct:   22 TVAQIAAAFAGGTVGVMGSLIAWELRQLRDKESKQCPYCLGTGRLRCGRCLGQGELLISEVGAQAKALPKTESPQPLQQQLDGFVKCSQCEGAASVECCHCGGDGRIIPETIEHAATGDLE 142          
BLAST of Gcaud2361.t1 vs. uniprot
Match: D8LRQ7_ECTSI (DnaJ Cysteine-Rich Domain-Containing Protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 3.960e-18
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0
Query:   26 NEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGS----LPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIPWAYER 118
            NE  A  AGG+VGV+GT+I LE+++ K+K R+ CPYC GSGKL CA C++ G+    LP + +  S   C  C+   ++ C +C GDGR +P   +R
Sbjct:  118 NEWIAGVAGGSVGVLGTLIQLELKQEKLKTRRNCPYCDGSGKLVCAVCFSAGTFTVKLPGSDTY-STLPCPGCAGNKYITCLNCRGDGRAVPRELDR 213          
BLAST of Gcaud2361.t1 vs. uniprot
Match: A0A8J2WYK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYK4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.800e-15
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query:   24 TVNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFLQCNHCDGDGRLIP 113
            T   + +AF GGTVG +G+++A+E +R K+K+ KQCPYC G+G + CA C   G       +   + C  C  +    C +C G GR IP
Sbjct:   52 TAEGLASAFLGGTVGAVGSVVAIEAKRVKVKKSKQCPYCDGTGAIACAACLGTG-------LTDGEPCRLCGGRTVHTCENCKGRGRFIP 134          
BLAST of Gcaud2361.t1 vs. uniprot
Match: A0A835YW14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW14_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.230e-13
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query:   25 VNEITAAFAGGTVGVMGTIIALEVRRHKIKERKQCPYCRGSGKLPCANCYTVGSL 79
            VNE+ + FAGGTVGVMGT+I LE+++  + +R  CPYC+G+G L CA CY VG L
Sbjct:   79 VNELMSGFAGGTVGVMGTLIGLELKKQNVVKRSVCPYCQGAGTLTCARCYGVGIL 133          
The following BLAST results are available for this feature:
BLAST of Gcaud2361.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J075_9FLOR1.770e-7774.29Protein ORANGE-LIKE, chloroplastic n=1 Tax=Gracila... [more]
R7QE93_CHOCR6.970e-7572.86Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2Y0D2_GALSU1.560e-3252.83Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]
A0A5J4ZBM1_PORPP4.970e-3151.26Protein ORANGE-LIKE, chloroplastic n=1 Tax=Porphyr... [more]
A0A7S0G9E2_9RHOD3.030e-2740.00Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
M1UXZ1_CYAM12.240e-2544.55Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7S1TK16_9RHOD8.360e-2143.80Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
D8LRQ7_ECTSI3.960e-1844.33DnaJ Cysteine-Rich Domain-Containing Protein n=2 T... [more]
A0A8J2WYK4_9STRA3.800e-1538.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835YW14_9STRA1.230e-1358.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852:SF67UNNAMED PRODUCTcoord: 25..87
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 25..87
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..140
NoneNo IPR availableTMHMMTMhelixcoord: 28..48
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 51..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_48_length_65905_cov_4.503282contigNODE_48_length_65905_cov_4.503282:61927..62415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2361.t1Gcaud2361.t1Gracilaria caudata M_176_S67 malemRNANODE_48_length_65905_cov_4.503282 61927..62415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2361.t1 ID=Gcaud2361.t1|Name=Gcaud2361.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=141bp
MDPSSVGTGYALLETFKGVVIGPTVNEITAAFAGGTVGVMGTIIALEVRR
HKIKERKQCPYCRGSGKLPCANCYTVGSLPSAASVASQKTCSTCSEKGFL
QCNHCDGDGRLIPWAYERAIRAQYEDYVYTSIDDYFLDGP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf