Gcaud8024.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8024.t1
Unique NameGcaud8024.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length389
Homology
[Close]
BLAST of Gcaud8024.t1 vs. uniprot
Match: A0A2V3ITE7_9FLOR (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITE7_9FLOR)

HSP 1 Score: 246 bits (627), Expect = 3.320e-74
Identity = 154/383 (40.21%), Postives = 204/383 (53.26%), Query Frame = 0 
Query:    6 SQFPLNVLQHIFKIGVE-------QVWCLS-AEYISQNPPVIIVDDEPFGY--LFRSDKDRFEYHPNVLTLMHCAAVCKTWADAVIDRDFWDSLKLGMDIFDLTEPWKLGGRWNELFRDMPVHVLCSKDQAVTNIGKISTSVQRGRCNFTIYFPEKAFSGNDLPEAWYHLHSLLRYDCEHLKIVSTSAHSSSGPFGDRRIGLYSVMTLTWPRLLSLDVDNANDEIRNFRMIRRLSRYVTLPEDVVKARAPFPALKKLCLSGKLGFDIHKFVPLVAPRLEHLWVNITELEPYSVVEGSPT--QMHKKRLLHEKFLEEDKAYRTFVTTFCMHAFKWPGPKTMNEHKK--EWISRSSDIFIQTNVLIFEKREGKRCSLQLSVKEFF 374
            S FP +VLQ IF IGV        +VW  +  EY   +  V   +D   GY  LF+ D+D F   P V TLM CA VCK W+DA+I++ FWDS    M      EPWKLG RWN LF  +PV +L + DQ ++NIGKI TS++RGR +F +Y P  +    +   AW  L   LR    HLK VS         F  +R+G  ++    WP L SLDVD A + I +  M+R  +   +  E VV+A  PFP LKKL L         + V LVAP++EH ++        S     P    MH   + H +FL+EDK YRTFVT + +HAF W GPK +   +   EW SR S       VLI E+R+GK   +  ++K+FF
Sbjct:    2 SNFPCDVLQRIFSIGVSIFSIGVREVWRPAHGEYAHLS--VSSAEDVEGGYRLLFKPDRDDFRGIPEVFTLMQCAQVCKVWSDAIIEKRFWDSNVTTMLGEQYAEPWKLGRRWNALFAHVPVPILGTMDQFLSNIGKIETSIRRGRPSFHVYLPLSSDRRRETIRAWCSLEPFLRTKALHLK-VSNMTTGDDDLFRGKRVGFKTLTLNEWPLLQSLDVDLAENGILSPAMVRSRTELDSKLEHVVRANLPFPCLKKLSLPTPPNGRGAQLVTLVAPKVEHCFIF------NSGYSNDPPGGDMHCNCIWHSQFLQEDKKYRTFVTPYFLHAFLWLGPKAIGYERWIWEWFSRKSHC-PDYGVLISERRDGKVYEVGFTLKQFF 374
The following BLAST results are available for this feature:
BLAST of Gcaud8024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITE7_9FLOR3.320e-7440.21Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_47_length_66049_cov_4.331180contigNODE_47_length_66049_cov_4.331180:28765..29931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8024.t1Gcaud8024.t1Gracilaria caudata M_176_S67 malemRNANODE_47_length_66049_cov_4.331180 28765..29931 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8024.t1 ID=Gcaud8024.t1|Name=Gcaud8024.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=389bp
MNVPISQFPLNVLQHIFKIGVEQVWCLSAEYISQNPPVIIVDDEPFGYLF
RSDKDRFEYHPNVLTLMHCAAVCKTWADAVIDRDFWDSLKLGMDIFDLTE
PWKLGGRWNELFRDMPVHVLCSKDQAVTNIGKISTSVQRGRCNFTIYFPE
KAFSGNDLPEAWYHLHSLLRYDCEHLKIVSTSAHSSSGPFGDRRIGLYSV
MTLTWPRLLSLDVDNANDEIRNFRMIRRLSRYVTLPEDVVKARAPFPALK
KLCLSGKLGFDIHKFVPLVAPRLEHLWVNITELEPYSVVEGSPTQMHKKR
LLHEKFLEEDKAYRTFVTTFCMHAFKWPGPKTMNEHKKEWISRSSDIFIQ
TNVLIFEKREGKRCSLQLSVKEFFEVENLRKLHIPEAE*
back to top