Gcaud7468.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7468.t1
Unique NameGcaud7468.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length219
Homology
BLAST of Gcaud7468.t1 vs. uniprot
Match: A0A2V3IT66_9FLOR (V-type proton ATPase subunit E3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT66_9FLOR)

HSP 1 Score: 310 bits (793), Expect = 1.040e-104
Identity = 170/217 (78.34%), Postives = 183/217 (84.33%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVAATSNAVTVVLDKDTYLADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMFTS 217
            MNDAQVKQQIQQMVSFIRQEAKDK+ EI  KA+EDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKST+QNAARL  LKARD ILQETYD AA+ L+ LPE D   Y   LKALI QGL VL D  V VRCR  DA+ V   LP + EEYVA+T +A T+VLD DTYL+D+CTGGVVLLSQGGTIVVENTFESRLEIAYQQNLP+IR MMFTS
Sbjct:    1 MNDAQVKQQIQQMVSFIRQEAKDKSNEIRVKAEEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTDQNAARLQQLKARDAILQETYDDAAKKLSQLPESDPEAYHALLKALIQQGLNVLNDKDVVVRCRRVDAEIVKSSLPSLTEEYVASTKDAATIVLDSDTYLSDNCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPQIRVMMFTS 217          
BLAST of Gcaud7468.t1 vs. uniprot
Match: R7QIA3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA3_CHOCR)

HSP 1 Score: 298 bits (764), Expect = 2.690e-100
Identity = 163/215 (75.81%), Postives = 185/215 (86.05%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVAATSNAVTVVLDKDTYLADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMF 215
            MND+QVKQQIQQMVSFI+QEA DK+ EI  KA+EDFNIRKLS VE+AREKIRAEYEKKVKQIDINRKIAKSTEQNAARL+VLKARD ILQET D A++ L+A+P  D A YK  + AL+MQGL VLAD+ V VRCR+AD + V  +LP V EEYVA + + VTV LD++T+LADSCTGGVVLLS+GGTIVVENTFESRLEIAYQQNLPKIR MMF
Sbjct:    1 MNDSQVKQQIQQMVSFIKQEADDKSNEIRVKAEEDFNIRKLSAVESAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLEVLKARDNILQETMDGASKKLSAIPAADPAMYKSIINALVMQGLVVLADADVVVRCRAADIELVDALLPSVTEEYVATSGSPVTVNLDRNTFLADSCTGGVVLLSRGGTIVVENTFESRLEIAYQQNLPKIRGMMF 215          
BLAST of Gcaud7468.t1 vs. uniprot
Match: A0A5J4YYV0_PORPP (V-type proton ATPase subunit E1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYV0_PORPP)

HSP 1 Score: 196 bits (499), Expect = 1.980e-59
Identity = 119/215 (55.35%), Postives = 144/215 (66.98%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVAATSNAVTVVLDKDTYLADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMF 215
            MND QV+QQIQQMVSFIRQEA +KA EI  KA+E+FNIRKLS VEAAREKIRAEYEKK KQI I +KI  STE NAARL VLK  D  LQ    +A + L  +  +D   Y  FL    +QGL  LAD  V ++ R  DA  +  +LP + +EY + T   V + +D  T+L +   GGVVL S  G IV++NTF SRL IAY+QNLP IR M+F
Sbjct:    1 MNDQQVRQQIQQMVSFIRQEADEKANEILVKAEEEFNIRKLSAVEAAREKIRAEYEKKNKQIAIYQKIQNSTELNAARLKVLKEMDAELQALLGRALEELVTI-SKDKEKYSRFLHDATLQGLIALADERVVLKVRLEDAPLLKAVLPQIEKEYTSKTGKKVALSIDGSTFLDEKSAGGVVLSSNEGRIVLDNTFASRLNIAYEQNLPVIRTMLF 214          
BLAST of Gcaud7468.t1 vs. uniprot
Match: A0A7S2Z968_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z968_9RHOD)

HSP 1 Score: 189 bits (480), Expect = 3.730e-57
Identity = 109/211 (51.66%), Postives = 144/211 (68.25%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVAATSNAVTVVLDKDTYLADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIR 211
            MND+QVKQQI QMVSFI+QEA +KA EI  KA+EDFNIRKLS VE++REKIR EYE+K KQI IN+KIA ST  N +RL VLK ++ +++E YD+A Q L  + E D+  Y + L+  I+QGL VL D  V+V  +  D+  V ++LP +A+ Y   T N V + L  +  L +   GG+ L+S+ G I + NTFESRLE  Y+ NLP  R
Sbjct:    1 MNDSQVKQQISQMVSFIKQEADEKANEIRVKAEEDFNIRKLSAVESSREKIREEYERKTKQIQINQKIAYSTANNDSRLKVLKFKEEMMREIYDEAMQKLEEI-EMDSEKYGELLRGFILQGLIVLGDQEVAVVTKEKDSGFVQQMLPQIADMYEHMTGNKVYLALTSNEVLPEDHPGGITLISEEGKIRLANTFESRLETTYESNLPYFR 210          
BLAST of Gcaud7468.t1 vs. uniprot
Match: A9NNQ7_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NNQ7_PICSI)

HSP 1 Score: 173 bits (438), Expect = 1.080e-50
Identity = 105/228 (46.05%), Postives = 146/228 (64.04%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVA-ATSNAVTVVLDKDTYL---------ADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMFTSA 218
            MNDA V +QIQQMV FIRQEA++KA EI   A+E+FNI KL  VEA + KIR EYE+K KQ+D+ +KI  S + NA+R+ VL+A+D ++    + A + + A+  QD   YK  LK LI+QGL  L +  + +RCR AD   V  IL    EEY   A  +A  ++LD+ TYL           SC GG+VL S+ G IV ENT ++RL++ ++Q LP+IR+++F  A
Sbjct:    1 MNDADVSKQIQQMVRFIRQEAEEKANEIGVSAEEEFNIEKLQLVEAEKRKIRQEYERKEKQVDVRKKIEYSMQLNASRIKVLQAQDDLVASMKESAGKEILAI-SQDHHFYKRLLKDLIVQGLLRLKEPALQLRCRKADRWFVESILEEAKEEYAEKANVHAPQIILDEQTYLPPEPRPDGIGSSCAGGIVLASKDGKIVCENTLDARLDVVFRQKLPEIRKLLFGKA 227          
BLAST of Gcaud7468.t1 vs. uniprot
Match: J3M874_ORYBR (Uncharacterized protein n=5 Tax=Oryzeae TaxID=147380 RepID=J3M874_ORYBR)

HSP 1 Score: 170 bits (431), Expect = 1.310e-49
Identity = 101/227 (44.49%), Postives = 146/227 (64.32%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVA-ATSNAVTVVLDKDTYL----------ADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMFT 216
            MNDA V +QI QMV FI QEA++KA EI   A+E+FNI KL  VE+ + +IR EYE+KVKQ+D+ RKI  ST+ NAAR+ VL+A+DG++ E  + A + L  + + DA  Y+  LK L++Q L  L +  V +RCR AD   V  +L +  +EY   A  N   +++D   YL            SC+GGVVL SQ G IV +NT ++R+E++++Q LP+IR+ +F+
Sbjct:    1 MNDADVGKQIHQMVRFILQEAEEKASEISVAAEEEFNIEKLQLVESEKRRIRQEYERKVKQVDVGRKIEYSTQLNAARIKVLQAQDGVVGEMKEDAGRGLLRVTK-DATAYRKVLKGLVVQSLLRLREPSVVLRCREADRGHVESVLEVAKKEYAEKAKVNLPKILIDGKVYLPPQMNTRDAHGPSCSGGVVLASQDGKIVCDNTLDARVEVSFKQKLPEIRKKLFS 226          
BLAST of Gcaud7468.t1 vs. uniprot
Match: A0A7J7IIC8_9RHOD (V-ATPase V1 sector subunit E n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIC8_9RHOD)

HSP 1 Score: 170 bits (430), Expect = 2.630e-49
Identity = 101/231 (43.72%), Postives = 151/231 (65.37%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLA-DSHVSVRCRSADADTVSEILPLVAEEYV------------AATSNAVTVVLDKDTYLADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMFTSA 218
            MNDAQV+QQ+QQMV+FI QEA +K  E+ TKA+E+F++RKLS  E  REKIRAE+E+K KQ+  +++IA ++E NAARL VL+AR+  L++ Y+QA + L A   +  + Y+  L+ LI QGL ++  + +V +  R  D D V  +LP +   Y             A++ + V+V L ++  L D+C GGV+L+S  G +  +NT E RLEIAYQQNL  +R++++  A
Sbjct:    1 MNDAQVQQQVQQMVAFICQEADEKVNELRTKAEEEFHLRKLSIFEEQREKIRAEFERKHKQLQASKRIALASELNAARLRVLRARETALRDLYEQAREQLVAFGNEAGSAYQQLLERLIDQGLGLMQPEPNVHLILRPRDRDLVESLLPRLRSRYQRVMLTSSSTNMDASSESQVSVALAENERLDDTCAGGVILVSADGRVRCDNTLERRLEIAYQQNLAHLRELLYGDA 231          
BLAST of Gcaud7468.t1 vs. uniprot
Match: A0A2R6WZT1_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WZT1_MARPO)

HSP 1 Score: 169 bits (428), Expect = 3.490e-49
Identity = 102/226 (45.13%), Postives = 147/226 (65.04%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVAA--TSNAVTVVLDKDTYLADS---------CTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMF 215
            MND+QV +Q+ QMV FIRQEA++KA EI   A+E+FNI KL  VEA ++KIR +YE+K KQ+++ +KI  ST+ NA+RL VL+A+D +++    +A + L ++ E D   Y   LK+LI+QGL  L +  V +RCR  D   V  +L     EY+A   T  +  V++D  T+L            CTGGVVL S+ G IV ENT ++RLEI+++QNLP+IR+ +F
Sbjct:    1 MNDSQVSEQVTQMVHFIRQEAEEKANEIGVSAEEEFNIEKLQLVEAEKKKIRLDYERKEKQVEVRKKIEYSTQLNASRLKVLQAQDDLVRAMKAEAEKQLVSVSE-DGDAYSQLLKSLIVQGLYRLKEPSVQLRCREQDYGLVEGVLDDAKTEYMAKVQTETSPEVLVDGQTFLPGPPEEGTPGPFCTGGVVLASKDGRIVCENTLDARLEISFKQNLPEIRKQLF 225          
BLAST of Gcaud7468.t1 vs. uniprot
Match: W1P9I2_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1P9I2_AMBTC)

HSP 1 Score: 169 bits (428), Expect = 3.590e-49
Identity = 103/229 (44.98%), Postives = 143/229 (62.45%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVA-ATSNAVTVVLDKDTYL----------ADSCTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMFTSA 218
            MNDA V +QIQQMV FIRQEA++KA EI   A+E+FNI KL  VEA ++KIR EYE+K KQ++I +KI  S + NA R+ VL+A+D ++    D AA+ L  + + D   YK  L+ LI+QGL  L +  + +RCR  D   +  +L    EEY   A  +A  + +DK  YL            SC GGVVL SQ G IV+ENT ++RL++ ++Q LP+IR+ +F  A
Sbjct:    1 MNDADVSKQIQQMVRFIRQEAEEKANEILVSAEEEFNIEKLQLVEAEKKKIRQEYERKQKQVEIRKKIEYSMQLNACRITVLQAQDDLVNSMKDSAAKELLCISD-DHHSYKKLLEDLIVQGLLRLKEPSILLRCRETDLGLIESVLNDAKEEYSEQANVHAPNIAIDKRVYLPPPPSHHKAHGSSCAGGVVLASQDGKIVLENTLDARLDVVFRQKLPEIRKRLFGKA 228          
BLAST of Gcaud7468.t1 vs. uniprot
Match: A0A835IJR6_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IJR6_9MAGN)

HSP 1 Score: 169 bits (428), Expect = 3.590e-49
Identity = 102/226 (45.13%), Postives = 147/226 (65.04%), Query Frame = 0
Query:    1 MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREKIRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNLAALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLVAEEYVA-ATSNAVTVVLDKDTYLADS----------CTGGVVLLSQGGTIVVENTFESRLEIAYQQNLPKIRQMMF 215
            MNDA V +QIQQMV FIRQEA++KA EI   A+E+FNI KL  VEA ++KIR EYEKK KQ+D+ +KI  S + NA+R+ VL+A+D ++    + AA+ L  +  QD   YK  LK LI+Q L  L +  V +RCR  D + V  +L    EEY A A  ++  +++DK T+L  +          C+GGVVL S+ G IV+ENT ++RL++ +++ LP+IR+ +F
Sbjct:    1 MNDADVSKQIQQMVRFIRQEAEEKANEILVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVDVRKKIEYSMQLNASRIKVLQAQDDLVNSMKESAAKELLRV-SQDHTKYKKLLKDLIVQSLLRLKEPAVLLRCRKTDVELVDSVLQSAKEEYSAKAEVHSPEILVDKQTFLPPAPSSQDVHGPHCSGGVVLASRDGKIVIENTLDARLDLVFRKKLPEIRKHLF 225          
The following BLAST results are available for this feature:
BLAST of Gcaud7468.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IT66_9FLOR1.040e-10478.34V-type proton ATPase subunit E3 n=1 Tax=Gracilario... [more]
R7QIA3_CHOCR2.690e-10075.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YYV0_PORPP1.980e-5955.35V-type proton ATPase subunit E1 n=1 Tax=Porphyridi... [more]
A0A7S2Z968_9RHOD3.730e-5751.66Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A9NNQ7_PICSI1.080e-5046.05Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
J3M874_ORYBR1.310e-4944.49Uncharacterized protein n=5 Tax=Oryzeae TaxID=1473... [more]
A0A7J7IIC8_9RHOD2.630e-4943.72V-ATPase V1 sector subunit E n=1 Tax=Cyanidiococcu... [more]
A0A2R6WZT1_MARPO3.490e-4945.13Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
W1P9I2_AMBTC3.590e-4944.98Uncharacterized protein n=1 Tax=Amborella trichopo... [more]
A0A835IJR6_9MAGN3.590e-4945.13Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038495V-type ATPase subunit E, C-terminal domain superfamilyGENE3D3.30.2320.30coord: 92..218
e-value: 2.9E-34
score: 119.7
IPR002842V-type ATPase subunit EPFAMPF01991vATP-synt_Ecoord: 16..215
e-value: 1.4E-58
score: 197.6
IPR002842V-type ATPase subunit EPANTHERPTHR45715ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATEDcoord: 1..216
IPR002842V-type ATPase subunit EHAMAPMF_00311ATP_synth_E_archcoord: 8..216
score: 11.654728
NoneNo IPR availableGENE3D6.10.250.1620coord: 1..62
e-value: 6.0E-23
score: 82.6
NoneNo IPR availablePANTHERPTHR45715:SF3ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATEDcoord: 1..216
NoneNo IPR availableSUPERFAMILY160527V-type ATPase subunit E-likecoord: 88..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_477_length_24373_cov_4.435714contigNODE_477_length_24373_cov_4.435714:12792..13448 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7468.t1Gcaud7468.t1Gracilaria caudata M_176_S67 malemRNANODE_477_length_24373_cov_4.435714 12792..13448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7468.t1 ID=Gcaud7468.t1|Name=Gcaud7468.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=219bp
MNDAQVKQQIQQMVSFIRQEAKDKAKEIETKADEDFNIRKLSTVEAAREK
IRAEYEKKVKQIDINRKIAKSTEQNAARLDVLKARDGILQETYDQAAQNL
AALPEQDAAGYKDFLKALIMQGLQVLADSHVSVRCRSADADTVSEILPLV
AEEYVAATSNAVTVVLDKDTYLADSCTGGVVLLSQGGTIVVENTFESRLE
IAYQQNLPKIRQMMFTSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038495ATPase_E_C
IPR002842ATPase_V1_Esu