Gcaud8000.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8000.t1
Unique NameGcaud8000.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length216
Homology
BLAST of Gcaud8000.t1 vs. uniprot
Match: A0A2V3IV40_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV40_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 2.510e-45
Identity = 93/212 (43.87%), Postives = 138/212 (65.09%), Query Frame = 0
Query:    2 EGSAETLQQYGSAESTQSFLLELNGGEKVVNTSLTTADEHIITSHEMHIEQISAMQLNISVKLFFEGVPGEAKYTVQAVVKDEDGEMYNNVAEQLHSVYGIVLVQYENSQLKIVSGDTGEGLTLSASEQGDGKPVSVNWIAYAPEGVDVEATAHVLTKK-RDAILGFEDVNMKEDGMEISVRRGRTGSAVVVIESRNVLLHGESFETALVVK 212
            +GS+ETL QYGSAESTQ FL ELN   ++VNT+L T++  IITS+ + ++QIS    NI+  LFFE +PGEA Y + A  +   G     + E+ HSVYG+      +  + ++SGD G GL+L +S  G+ +PV + +IA  P  V    TA+VL  + + A+L  +DV++  DG+ I +R  R GSA++ IES N+++ GESFETA++V+
Sbjct:   25 QGSSETLLQYGSAESTQFFLFELNDTAQLVNTTLETSNHSIITSYVIKVDQISDTLFNITATLFFEYLPGEAVYQIAARTESPGGASIYTM-ERNHSVYGMAFYDDSHGTMALISGDFGYGLSLISSSLGE-EPVRLKYIANVPREVAFNLTANVLFNRVQGAMLEDDDVSIDGDGLYIKLRPHRIGSALITIESSNLVVDGESFETAVIVR 234          
BLAST of Gcaud8000.t1 vs. uniprot
Match: A0A2V3ILQ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ4_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 3.810e-32
Identity = 69/208 (33.17%), Postives = 117/208 (56.25%), Query Frame = 0
Query:    3 GSAETLQQYGSAESTQSFLLELNGGEKVVNTSLTTADEHIITSHEMHIEQISAMQLNISVKLFFEGVPGEAKYTVQAVVKDEDGEMYNNVAEQLHSVYGIVLVQYENSQLKIVSGDTGEGLTLSASEQGDGKPVSVNWIAYAPEGVDVEATAHVLTKKRDA---ILGFEDVNMKEDGMEISVRRGRTGSAVVVIESRNVLLHGESFET 207
            GS E+L QYGSA+S +++LL ++  + V   SL+T D  ++TSHE+   Q+S    NISV LFF+G+PGE +Y + A  +  DG  +       HSV+G+V  +    + ++VSGD  +G+  ++    +    + + I++ P GV +E  + +  +       +L   D+++  DGM + V   RTG+ +V +E   + + GES ET
Sbjct:   27 GSHESLLQYGSAQSVKTYLLNVSPEQTVTEVSLSTQDGKVLTSHEVSFSQVSQGLYNISVNLFFDGIPGEVQYRITAQTRASDGSEHREELSASHSVFGVVFYEEVQGERRLVSGDDSDGIHYTSFTTPESPARTFSAISHTPAGVILEGKSSIRAQTGSGASPLLLESDIDVSGDGMSVDVHPYRTGAVIVTVEFPELQVDGESHET 234          
BLAST of Gcaud8000.t1 vs. uniprot
Match: A0A2V3IBJ0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBJ0_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 2.020e-25
Identity = 69/194 (35.57%), Postives = 106/194 (54.64%), Query Frame = 0
Query:   20 FLLELNGGEKVVNTSLTTADEHIITSHEMHIEQISAMQLNISVKLFFEGVPGEAKYTVQAVVKDEDGEMYNNVAEQLHSVYGIVLVQYENSQLKIVSGDTGEGLTLSASEQGDGKPVSVNWIAYAPEGVDVEATAHVLTKK-RDAILGFEDVNMKEDGMEISVRRGRTGSAVVVIESRNVLLHGESFETALVVK 212
            FL ELN   ++VNT+L T++  IITS+ + ++QIS    NI+  LFFE +PGEA Y + A  +   G     + E+ HSVYG+      +  + ++SGD G    +                   P  V    TA+VL  +   A+L  +DV++  DG+ I +R    GSA++ IES N+++ GESFETA++V+
Sbjct:   10 FLFELNDTAQLVNTTLETSNHSIITSYVIKVDQISDTLFNITATLFFEYLPGEAVYQIAARTESPGGASIYTM-ERNHSVYGMAFYDDSHGTMALISGDFGTSQNV-------------------PREVAFNPTANVLFNRVHGAMLEDDDVSIDGDGLYIKLRPHGIGSALITIESSNLVVDGESFETAVIVR 183          
The following BLAST results are available for this feature:
BLAST of Gcaud8000.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IV40_9FLOR2.510e-4543.87Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3ILQ4_9FLOR3.810e-3233.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBJ0_9FLOR2.020e-2535.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_475_length_24449_cov_7.021759contigNODE_475_length_24449_cov_7.021759:7598..8245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8000.t1Gcaud8000.t1Gracilaria caudata M_176_S67 malemRNANODE_475_length_24449_cov_7.021759 7598..8245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8000.t1 ID=Gcaud8000.t1|Name=Gcaud8000.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=216bp
MEGSAETLQQYGSAESTQSFLLELNGGEKVVNTSLTTADEHIITSHEMHI
EQISAMQLNISVKLFFEGVPGEAKYTVQAVVKDEDGEMYNNVAEQLHSVY
GIVLVQYENSQLKIVSGDTGEGLTLSASEQGDGKPVSVNWIAYAPEGVDV
EATAHVLTKKRDAILGFEDVNMKEDGMEISVRRGRTGSAVVVIESRNVLL
HGESFETALVVKAVA*
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